RNA–Protein interactions for RNA: ENST00000534139.5

NDUFV1-227, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 3

Gene NDUFV1, Length 626 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-227ENST00000534139 RAPGEF2Q9Y4G8 1499 aa36.3■■■■□ 3.4
NDUFV1-227ENST00000534139 KIAA0586Q9BVV6 1533 aa36.26■■■■□ 3.4
NDUFV1-227ENST00000534139 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
NDUFV1-227ENST00000534139 CSRNP3Q8WYN3 585 aa36.22■■■■□ 3.39
NDUFV1-227ENST00000534139 EEA1Q15075 1411 aa36.2■■■■□ 3.39
NDUFV1-227ENST00000534139 PRG4Q92954 1404 aaPredicted RBP36.18■■■■□ 3.38
NDUFV1-227ENST00000534139 ERCC6L2Q5T890 1561 aa36.15■■■■□ 3.38
NDUFV1-227ENST00000534139 PRXQ9BXM0 1461 aa36.14■■■■□ 3.38
NDUFV1-227ENST00000534139 FAM9AQ8IZU1 332 aaPredicted RBP36.11■■■■□ 3.37
NDUFV1-227ENST00000534139 IQGAP2Q13576 1575 aa36.02■■■■□ 3.36
NDUFV1-227ENST00000534139 CARMIL2Q6F5E8 1435 aa35.92■■■■□ 3.34
NDUFV1-227ENST00000534139 CTTNBP2Q8WZ74 1663 aa35.83■■■■□ 3.33
NDUFV1-227ENST00000534139 UGGT2Q9NYU1 1516 aa35.83■■■■□ 3.33
NDUFV1-227ENST00000534139 TNIKQ9UKE5 1360 aa35.79■■■■□ 3.32
NDUFV1-227ENST00000534139 PTPRGP23470 1445 aa35.79■■■■□ 3.32
NDUFV1-227ENST00000534139 TTBK1Q5TCY1 1321 aaPredicted RBP35.77■■■■□ 3.32
NDUFV1-227ENST00000534139 DISP1Q96F81 1524 aa35.77■■■■□ 3.32
NDUFV1-227ENST00000534139 KIF21BO75037 1637 aa35.74■■■■□ 3.31
NDUFV1-227ENST00000534139 GOLGA3Q08378 1498 aa35.69■■■■□ 3.3
NDUFV1-227ENST00000534139 TRHP20396 242 aaPredicted RBP35.67■■■■□ 3.3
NDUFV1-227ENST00000534139 KIAA0556O60303 1618 aa35.65■■■■□ 3.3
NDUFV1-227ENST00000534139 NPM1P06748 294 aaKnown RBP eCLIP35.65■■■■□ 3.3
NDUFV1-227ENST00000534139 EHMT2Q96KQ7 1210 aa35.64■■■■□ 3.3
NDUFV1-227ENST00000534139 UBTFP17480 764 aaKnown RBP35.61■■■■□ 3.29
NDUFV1-227ENST00000534139 RANGAP1P46060 587 aaPredicted RBP35.54■■■■□ 3.28
NDUFV1-227ENST00000534139 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
NDUFV1-227ENST00000534139 UACAQ9BZF9 1416 aa35.52■■■■□ 3.28
NDUFV1-227ENST00000534139 P3H3Q8IVL6 736 aa35.52■■■■□ 3.28
NDUFV1-227ENST00000534139 UHRF1BP1LA0JNW5 1464 aa35.45■■■■□ 3.27
NDUFV1-227ENST00000534139 ABCC2Q92887 1545 aa35.41■■■■□ 3.26
NDUFV1-227ENST00000534139 SAMD9Q5K651 1589 aa35.4■■■■□ 3.26
NDUFV1-227ENST00000534139 MAPKBP1O60336 1514 aa35.35■■■■□ 3.25
NDUFV1-227ENST00000534139 PLB1Q6P1J6 1458 aa35.35■■■■□ 3.25
NDUFV1-227ENST00000534139 EFCAB5A4FU69 1503 aa35.3■■■■□ 3.24
NDUFV1-227ENST00000534139 KDM5BQ9UGL1 1544 aa35.27■■■■□ 3.24
NDUFV1-227ENST00000534139 ABCA8O94911 1581 aa35.27■■■■□ 3.24
NDUFV1-227ENST00000534139 FHOD3Q2V2M9 1422 aa35.27■■■■□ 3.24
NDUFV1-227ENST00000534139 FAM69CQ0P6D2 419 aa35.23■■■■□ 3.23
NDUFV1-227ENST00000534139 ABCC10Q5T3U5 1492 aa35.22■■■■□ 3.23
NDUFV1-227ENST00000534139 ASXL2Q76L83 1435 aa35.19■■■■□ 3.22
NDUFV1-227ENST00000534139 ZCCHC11Q5TAX3 1644 aaKnown RBP35.15■■■■□ 3.22
NDUFV1-227ENST00000534139 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
NDUFV1-227ENST00000534139 ARID3CA6NKF2 412 aa35.1■■■■□ 3.21
NDUFV1-227ENST00000534139 KIF13AQ9H1H9 1805 aa35.1■■■■□ 3.21
NDUFV1-227ENST00000534139 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
NDUFV1-227ENST00000534139 DIP2BQ9P265 1576 aa35.09■■■■□ 3.21
NDUFV1-227ENST00000534139 FMN1Q68DA7 1419 aa35.04■■■■□ 3.2
NDUFV1-227ENST00000534139 ATP10BO94823 1461 aa35.03■■■■□ 3.2
NDUFV1-227ENST00000534139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.03■■■■□ 3.2
NDUFV1-227ENST00000534139 HNRNPUL2Q1KMD3 747 aaKnown RBP35.03■■■■□ 3.2
NDUFV1-227ENST00000534139 WDR7Q9Y4E6 1490 aa35■■■■□ 3.19
NDUFV1-227ENST00000534139 NUP153P49790 1475 aaKnown RBP34.98■■■■□ 3.19
NDUFV1-227ENST00000534139 EPRSP07814 1512 aaKnown RBP34.97■■■■□ 3.19
NDUFV1-227ENST00000534139 CLIP1P30622 1438 aa34.97■■■■□ 3.19
NDUFV1-227ENST00000534139 KCNH8Q96L42 1107 aa34.96■■■■□ 3.19
NDUFV1-227ENST00000534139 GLI2P10070 1586 aa34.95■■■■□ 3.18
NDUFV1-227ENST00000534139 LOC105371045A0A1W2PR82 267 aa34.94■■■■□ 3.18
NDUFV1-227ENST00000534139 ATP1B4Q9UN42 357 aaPredicted RBP34.94■■■■□ 3.18
NDUFV1-227ENST00000534139 PLEKHD1A6NEE1 506 aa34.85■■■■□ 3.17
NDUFV1-227ENST00000534139 TSPOAP1O95153 1857 aa34.8■■■■□ 3.16
NDUFV1-227ENST00000534139 HECW1Q76N89 1606 aa34.79■■■■□ 3.16
NDUFV1-227ENST00000534139 CEP162Q5TB80 1403 aa34.79■■■■□ 3.16
NDUFV1-227ENST00000534139 MAP3K4Q9Y6R4 1608 aa34.74■■■■□ 3.15
NDUFV1-227ENST00000534139 CD109Q6YHK3 1445 aa34.73■■■■□ 3.15
NDUFV1-227ENST00000534139 CASKIN1Q8WXD9 1431 aa34.73■■■■□ 3.15
NDUFV1-227ENST00000534139 CDK13Q14004 1512 aaKnown RBP34.72■■■■□ 3.15
NDUFV1-227ENST00000534139 CDK11AQ9UQ88 783 aaPredicted RBP34.72■■■■□ 3.15
NDUFV1-227ENST00000534139 TEX14Q8IWB6 1497 aa34.68■■■■□ 3.14
NDUFV1-227ENST00000534139 CFAP43Q8NDM7 1665 aa34.66■■■■□ 3.14
NDUFV1-227ENST00000534139 PCF11O94913 1555 aaKnown RBP34.65■■■■□ 3.14
NDUFV1-227ENST00000534139 PPRC1Q5VV67 1664 aaKnown RBP34.64■■■■□ 3.14
NDUFV1-227ENST00000534139 FYCO1Q9BQS8 1478 aa34.62■■■■□ 3.13
NDUFV1-227ENST00000534139 MAGI3Q5TCQ9 1506 aa34.61■■■■□ 3.13
NDUFV1-227ENST00000534139 ABCA9Q8IUA7 1624 aa34.59■■■■□ 3.13
NDUFV1-227ENST00000534139 CCDC18Q5T9S5 1454 aa34.59■■■■□ 3.13
NDUFV1-227ENST00000534139 KDM6BO15054 1643 aa34.57■■■■□ 3.12
NDUFV1-227ENST00000534139 LRRIQ1Q96JM4 1722 aa34.51■■■■□ 3.12
NDUFV1-227ENST00000534139 TROQ12816 1431 aaPredicted RBP34.5■■■■□ 3.11
NDUFV1-227ENST00000534139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.47■■■■□ 3.113e-8■■■■■ 34
NDUFV1-227ENST00000534139 PHLDB1Q86UU1 1377 aa34.43■■■■□ 3.1
NDUFV1-227ENST00000534139 COL17A1Q9UMD9 1497 aaPredicted RBP34.41■■■■□ 3.1
NDUFV1-227ENST00000534139 TTC37Q6PGP7 1564 aa34.38■■■■□ 3.09
NDUFV1-227ENST00000534139 VPS8Q8N3P4 1428 aa34.38■■■■□ 3.09
NDUFV1-227ENST00000534139 KIF14Q15058 1648 aa34.37■■■■□ 3.09
NDUFV1-227ENST00000534139 NEO1Q92859 1461 aa34.37■■■■□ 3.09
NDUFV1-227ENST00000534139 PLCH2O75038 1416 aa34.33■■■■□ 3.09
NDUFV1-227ENST00000534139 ARAP3Q8WWN8 1544 aa34.32■■■■□ 3.08
NDUFV1-227ENST00000534139 FANCAO15360 1455 aa34.3■■■■□ 3.08
NDUFV1-227ENST00000534139 MTUS2Q5JR59 1369 aa34.29■■■■□ 3.08
NDUFV1-227ENST00000534139 EFCAB2Q5VUJ9 269 aa34.27■■■■□ 3.08
NDUFV1-227ENST00000534139 AKNAQ7Z591 1439 aa34.27■■■■□ 3.08
NDUFV1-227ENST00000534139 CFAP74Q9C0B2 1584 aa34.23■■■■□ 3.07
NDUFV1-227ENST00000534139 MYO5CQ9NQX4 1742 aa34.21■■■■□ 3.07
NDUFV1-227ENST00000534139 RAPGEF3O95398 923 aa34.21■■■■□ 3.07
NDUFV1-227ENST00000534139 ARHGAP5Q13017 1502 aa34.16■■■■□ 3.06
NDUFV1-227ENST00000534139 DENND4BO75064 1496 aaPredicted RBP34.15■■■■□ 3.06
NDUFV1-227ENST00000534139 EHBP1L1Q8N3D4 1523 aa34.14■■■■□ 3.06
NDUFV1-227ENST00000534139 APLP2Q06481 763 aa34.13■■■■□ 3.05
NDUFV1-227ENST00000534139 ADGRL1O94910 1474 aa34.13■■■■□ 3.05
NDUFV1-227ENST00000534139 TIAM1Q13009 1591 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms