RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-215ENST00000533946 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
SSBP3-215ENST00000533946 CUL7Q14999 1698 aa16.63■□□□□ 0.25
SSBP3-215ENST00000533946 KIAA0586Q9BVV6 1533 aa16.58■□□□□ 0.24
SSBP3-215ENST00000533946 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-215ENST00000533946 ADCY10Q96PN6 1610 aa16.5■□□□□ 0.23
SSBP3-215ENST00000533946 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
SSBP3-215ENST00000533946 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
SSBP3-215ENST00000533946 DISP1Q96F81 1524 aa16.46■□□□□ 0.23
SSBP3-215ENST00000533946 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
SSBP3-215ENST00000533946 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
SSBP3-215ENST00000533946 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-215ENST00000533946 PTPRGP23470 1445 aa16.41■□□□□ 0.22
SSBP3-215ENST00000533946 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
SSBP3-215ENST00000533946 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
SSBP3-215ENST00000533946 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
SSBP3-215ENST00000533946 KIAA0556O60303 1618 aa16.35■□□□□ 0.21
SSBP3-215ENST00000533946 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
SSBP3-215ENST00000533946 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
SSBP3-215ENST00000533946 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
SSBP3-215ENST00000533946 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
SSBP3-215ENST00000533946 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
SSBP3-215ENST00000533946 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
SSBP3-215ENST00000533946 DIP2BQ9P265 1576 aa16.32■□□□□ 0.2
SSBP3-215ENST00000533946 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
SSBP3-215ENST00000533946 ABCC10Q5T3U5 1492 aa16.31■□□□□ 0.2
SSBP3-215ENST00000533946 ABCC2Q92887 1545 aa16.3■□□□□ 0.2
SSBP3-215ENST00000533946 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
SSBP3-215ENST00000533946 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP3-215ENST00000533946 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
SSBP3-215ENST00000533946 UACAQ9BZF9 1416 aa16.28■□□□□ 0.2
SSBP3-215ENST00000533946 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-215ENST00000533946 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
SSBP3-215ENST00000533946 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
SSBP3-215ENST00000533946 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
SSBP3-215ENST00000533946 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
SSBP3-215ENST00000533946 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
SSBP3-215ENST00000533946 ABCA8O94911 1581 aa16.21■□□□□ 0.18
SSBP3-215ENST00000533946 PPRC1Q5VV67 1664 aaKnown RBP16.2■□□□□ 0.18
SSBP3-215ENST00000533946 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
SSBP3-215ENST00000533946 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SSBP3-215ENST00000533946 EEA1Q15075 1411 aa16.15■□□□□ 0.18
SSBP3-215ENST00000533946 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.18
SSBP3-215ENST00000533946 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
SSBP3-215ENST00000533946 KIF21BO75037 1637 aa16.13■□□□□ 0.17
SSBP3-215ENST00000533946 COL17A1Q9UMD9 1497 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-215ENST00000533946 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
SSBP3-215ENST00000533946 GLI2P10070 1586 aa16.11■□□□□ 0.17
SSBP3-215ENST00000533946 ATP10BO94823 1461 aa16.1■□□□□ 0.17
SSBP3-215ENST00000533946 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.17
SSBP3-215ENST00000533946 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
SSBP3-215ENST00000533946 KDM6BO15054 1643 aa16.08■□□□□ 0.16
SSBP3-215ENST00000533946 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
SSBP3-215ENST00000533946 NUP153P49790 1475 aaKnown RBP16.04■□□□□ 0.16
SSBP3-215ENST00000533946 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
SSBP3-215ENST00000533946 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
SSBP3-215ENST00000533946 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
SSBP3-215ENST00000533946 KDM4FA0A1W2PPD8 638 aa15.97■□□□□ 0.15
SSBP3-215ENST00000533946 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
SSBP3-215ENST00000533946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
SSBP3-215ENST00000533946 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
SSBP3-215ENST00000533946 CFAP43Q8NDM7 1665 aa15.94■□□□□ 0.14
SSBP3-215ENST00000533946 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
SSBP3-215ENST00000533946 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
SSBP3-215ENST00000533946 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-215ENST00000533946 MAGI3Q5TCQ9 1506 aa15.91■□□□□ 0.14
SSBP3-215ENST00000533946 ABCA9Q8IUA7 1624 aa15.9■□□□□ 0.14
SSBP3-215ENST00000533946 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
SSBP3-215ENST00000533946 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
SSBP3-215ENST00000533946 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
SSBP3-215ENST00000533946 RAPGEF3O95398 923 aa15.85■□□□□ 0.13
SSBP3-215ENST00000533946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
SSBP3-215ENST00000533946 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
SSBP3-215ENST00000533946 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
SSBP3-215ENST00000533946 KIF14Q15058 1648 aa15.81■□□□□ 0.12
SSBP3-215ENST00000533946 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
SSBP3-215ENST00000533946 FRMPD1Q5SYB0 1578 aa15.8■□□□□ 0.12
SSBP3-215ENST00000533946 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
SSBP3-215ENST00000533946 ARAP3Q8WWN8 1544 aa15.79■□□□□ 0.12
SSBP3-215ENST00000533946 FMN1Q68DA7 1419 aa15.78■□□□□ 0.12
SSBP3-215ENST00000533946 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
SSBP3-215ENST00000533946 CLIP1P30622 1438 aa15.76■□□□□ 0.11
SSBP3-215ENST00000533946 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
SSBP3-215ENST00000533946 FANCAO15360 1455 aa15.72■□□□□ 0.11
SSBP3-215ENST00000533946 NEO1Q92859 1461 aa15.72■□□□□ 0.11
SSBP3-215ENST00000533946 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
SSBP3-215ENST00000533946 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
SSBP3-215ENST00000533946 RICTORQ6R327 1708 aa15.71■□□□□ 0.11
SSBP3-215ENST00000533946 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-215ENST00000533946 PLCH2O75038 1416 aa15.68■□□□□ 0.1
SSBP3-215ENST00000533946 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
SSBP3-215ENST00000533946 DENND4BO75064 1496 aaPredicted RBP15.66■□□□□ 0.1
SSBP3-215ENST00000533946 CDC42BPBQ9Y5S2 1711 aa15.66■□□□□ 0.1
SSBP3-215ENST00000533946 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
SSBP3-215ENST00000533946 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
SSBP3-215ENST00000533946 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
SSBP3-215ENST00000533946 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
SSBP3-215ENST00000533946 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
SSBP3-215ENST00000533946 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
SSBP3-215ENST00000533946 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms