RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
CHKA-207ENST00000533728 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHKA-207ENST00000533728 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
CHKA-207ENST00000533728 SOGA1O94964 1423 aa15.6■□□□□ 0.09
CHKA-207ENST00000533728 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
CHKA-207ENST00000533728 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
CHKA-207ENST00000533728 EEA1Q15075 1411 aa15.55■□□□□ 0.08
CHKA-207ENST00000533728 PPRC1Q5VV67 1664 aaKnown RBP15.54■□□□□ 0.08
CHKA-207ENST00000533728 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
CHKA-207ENST00000533728 PCF11O94913 1555 aaKnown RBP15.5■□□□□ 0.07
CHKA-207ENST00000533728 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
CHKA-207ENST00000533728 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
CHKA-207ENST00000533728 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
CHKA-207ENST00000533728 CUX1P39880 1505 aa15.47■□□□□ 0.07
CHKA-207ENST00000533728 GRIN2AQ12879 1464 aa15.46■□□□□ 0.06
CHKA-207ENST00000533728 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
CHKA-207ENST00000533728 NUP160Q12769 1436 aa15.44■□□□□ 0.06
CHKA-207ENST00000533728 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
CHKA-207ENST00000533728 PTPRMP28827 1452 aa15.4■□□□□ 0.06
CHKA-207ENST00000533728 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
CHKA-207ENST00000533728 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
CHKA-207ENST00000533728 GLI2P10070 1586 aa15.35■□□□□ 0.05
CHKA-207ENST00000533728 KIF21BO75037 1637 aa15.35■□□□□ 0.05
CHKA-207ENST00000533728 TRIM26Q12899 539 aaPredicted RBP15.32■□□□□ 0.04
CHKA-207ENST00000533728 HSPA2P54652 639 aa15.31■□□□□ 0.04
CHKA-207ENST00000533728 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
CHKA-207ENST00000533728 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
CHKA-207ENST00000533728 ABCA10Q8WWZ4 1543 aa15.29■□□□□ 0.04
CHKA-207ENST00000533728 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
CHKA-207ENST00000533728 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
CHKA-207ENST00000533728 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
CHKA-207ENST00000533728 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
CHKA-207ENST00000533728 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
CHKA-207ENST00000533728 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
CHKA-207ENST00000533728 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
CHKA-207ENST00000533728 HRCP23327 699 aa15.25■□□□□ 0.03
CHKA-207ENST00000533728 MAP3K4Q9Y6R4 1608 aa15.25■□□□□ 0.03
CHKA-207ENST00000533728 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
CHKA-207ENST00000533728 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
CHKA-207ENST00000533728 ASXL2Q76L83 1435 aa15.21■□□□□ 0.03
CHKA-207ENST00000533728 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
CHKA-207ENST00000533728 MADDQ8WXG6 1647 aa15.17■□□□□ 0.02
CHKA-207ENST00000533728 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
CHKA-207ENST00000533728 MED1Q15648 1581 aaPredicted RBP15.16■□□□□ 0.02
CHKA-207ENST00000533728 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
CHKA-207ENST00000533728 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
CHKA-207ENST00000533728 CUL7Q14999 1698 aa15.11■□□□□ 0.01
CHKA-207ENST00000533728 BCORL1Q5H9F3 1711 aa15.11■□□□□ 0.01
CHKA-207ENST00000533728 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
CHKA-207ENST00000533728 ABCC2Q92887 1545 aa15.11■□□□□ 0.01
CHKA-207ENST00000533728 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
CHKA-207ENST00000533728 IQSEC2Q5JU85 1478 aa15.07■□□□□ 0
CHKA-207ENST00000533728 KIF27Q86VH2 1401 aa15.06■□□□□ 0
CHKA-207ENST00000533728 PRXQ9BXM0 1461 aa15.06■□□□□ 0
CHKA-207ENST00000533728 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
CHKA-207ENST00000533728 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
CHKA-207ENST00000533728 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
CHKA-207ENST00000533728 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
CHKA-207ENST00000533728 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
CHKA-207ENST00000533728 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
CHKA-207ENST00000533728 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
CHKA-207ENST00000533728 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
CHKA-207ENST00000533728 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
CHKA-207ENST00000533728 IGF1RP08069 1367 aa14.98□□□□□ -0.01
CHKA-207ENST00000533728 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
CHKA-207ENST00000533728 PTPRGP23470 1445 aa14.98□□□□□ -0.01
CHKA-207ENST00000533728 CLIP1P30622 1438 aa14.98□□□□□ -0.01
CHKA-207ENST00000533728 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
CHKA-207ENST00000533728 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.01
CHKA-207ENST00000533728 CFAP43Q8NDM7 1665 aa14.96□□□□□ -0.01
CHKA-207ENST00000533728 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
CHKA-207ENST00000533728 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
CHKA-207ENST00000533728 MAGI3Q5TCQ9 1506 aa14.94□□□□□ -0.02
CHKA-207ENST00000533728 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
CHKA-207ENST00000533728 PREX1Q8TCU6 1659 aa14.9□□□□□ -0.02
CHKA-207ENST00000533728 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
CHKA-207ENST00000533728 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
CHKA-207ENST00000533728 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
CHKA-207ENST00000533728 PTPRTO14522 1441 aa14.87□□□□□ -0.03
CHKA-207ENST00000533728 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
CHKA-207ENST00000533728 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
CHKA-207ENST00000533728 HSPA1LP34931 641 aa14.85□□□□□ -0.03
CHKA-207ENST00000533728 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
CHKA-207ENST00000533728 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
CHKA-207ENST00000533728 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
CHKA-207ENST00000533728 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
CHKA-207ENST00000533728 FER1L4A9Z1Z3 1794 aa14.77□□□□□ -0.05
CHKA-207ENST00000533728 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CHKA-207ENST00000533728 TTC37Q6PGP7 1564 aa14.76□□□□□ -0.05
CHKA-207ENST00000533728 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
CHKA-207ENST00000533728 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
CHKA-207ENST00000533728 CARMIL2Q6F5E8 1435 aa14.74□□□□□ -0.05
CHKA-207ENST00000533728 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
CHKA-207ENST00000533728 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
CHKA-207ENST00000533728 APLP2Q06481 763 aa14.73□□□□□ -0.05
CHKA-207ENST00000533728 POGZQ7Z3K3 1410 aa14.73□□□□□ -0.05
CHKA-207ENST00000533728 RAPGEF3O95398 923 aa14.72□□□□□ -0.05
CHKA-207ENST00000533728 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.05
CHKA-207ENST00000533728 ARHGEF40Q8TER5 1519 aa14.71□□□□□ -0.06
CHKA-207ENST00000533728 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms