RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
PAX6-228ENST00000533333 BECN1Q14457 450 aa23.35■■□□□ 1.33
PAX6-228ENST00000533333 TAOK2Q9UL54 1235 aa23.34■■□□□ 1.33
PAX6-228ENST00000533333 NPHP1O15259 732 aa23.33■■□□□ 1.33
PAX6-228ENST00000533333 PPP1R15AO75807 674 aaPredicted RBP23.33■■□□□ 1.32
PAX6-228ENST00000533333 DNTTIP2Q5QJE6 756 aaKnown RBP23.33■■□□□ 1.32
PAX6-228ENST00000533333 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
PAX6-228ENST00000533333 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
PAX6-228ENST00000533333 CASC1Q6TDU7 716 aa23.25■■□□□ 1.31
PAX6-228ENST00000533333 ANP32EQ9BTT0 268 aa23.24■■□□□ 1.31
PAX6-228ENST00000533333 DDRGK1Q96HY6 314 aa23.23■■□□□ 1.31
PAX6-228ENST00000533333 IRX6P78412 446 aaPredicted RBP23.22■■□□□ 1.31
PAX6-228ENST00000533333 CLSTN1O94985 981 aa23.22■■□□□ 1.31
PAX6-228ENST00000533333 ABCC9O60706 1549 aa23.17■■□□□ 1.3
PAX6-228ENST00000533333 TSPY4P0CV99 314 aa23.16■■□□□ 1.3
PAX6-228ENST00000533333 TSPY10P0CW01 314 aa23.16■■□□□ 1.3
PAX6-228ENST00000533333 PLCB2Q00722 1185 aa23.16■■□□□ 1.3
PAX6-228ENST00000533333 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
PAX6-228ENST00000533333 GOLGA6L6A8MZA4 724 aa23.13■■□□□ 1.29
PAX6-228ENST00000533333 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
PAX6-228ENST00000533333 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
PAX6-228ENST00000533333 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
PAX6-228ENST00000533333 FGD1P98174 961 aa23.08■■□□□ 1.29
PAX6-228ENST00000533333 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
PAX6-228ENST00000533333 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
PAX6-228ENST00000533333 CFAP53Q96M91 514 aa23.07■■□□□ 1.28
PAX6-228ENST00000533333 LAS1LQ9Y4W2 734 aaKnown RBP23.06■■□□□ 1.28
PAX6-228ENST00000533333 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
PAX6-228ENST00000533333 OS9Q13438 667 aaPredicted RBP23.03■■□□□ 1.28
PAX6-228ENST00000533333 NAP1L5Q96NT1 182 aaPredicted RBP23.01■■□□□ 1.27
PAX6-228ENST00000533333 NRDCO43847 1150 aa22.99■■□□□ 1.27
PAX6-228ENST00000533333 ISY1Q9ULR0 285 aaKnown RBP22.99■■□□□ 1.27
PAX6-228ENST00000533333 KCNJ4P48050 445 aa22.97■■□□□ 1.27
PAX6-228ENST00000533333 PRM3Q9NNZ6 103 aa22.94■■□□□ 1.26
PAX6-228ENST00000533333 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
PAX6-228ENST00000533333 MAPK8IP3Q9UPT6 1336 aa22.92■■□□□ 1.26
PAX6-228ENST00000533333 SENP3-EIF4A1A0A087X0R7 540 aa22.9■■□□□ 1.26
PAX6-228ENST00000533333 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
PAX6-228ENST00000533333 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
PAX6-228ENST00000533333 GOLGA6L4A6NEF3 574 aa22.89■■□□□ 1.25
PAX6-228ENST00000533333 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
PAX6-228ENST00000533333 ERICH6BQ5W0A0 696 aa22.88■■□□□ 1.25
PAX6-228ENST00000533333 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
PAX6-228ENST00000533333 RGL3Q3MIN7 710 aa22.87■■□□□ 1.25
PAX6-228ENST00000533333 KNSTRNQ9Y448 316 aa22.86■■□□□ 1.25
PAX6-228ENST00000533333 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
PAX6-228ENST00000533333 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
PAX6-228ENST00000533333 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.24
PAX6-228ENST00000533333 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
PAX6-228ENST00000533333 CHAF1AQ13111 956 aaPredicted RBP22.82■■□□□ 1.24
PAX6-228ENST00000533333 NUDCQ9Y266 331 aa22.81■■□□□ 1.24
PAX6-228ENST00000533333 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
PAX6-228ENST00000533333 CDCA8Q53HL2 280 aa22.8■■□□□ 1.24
PAX6-228ENST00000533333 FRAT1Q92837 279 aaPredicted RBP22.79■■□□□ 1.24
PAX6-228ENST00000533333 DRC7Q8IY82 874 aa22.78■■□□□ 1.24
PAX6-228ENST00000533333 POGKQ9P215 609 aa22.78■■□□□ 1.24
PAX6-228ENST00000533333 RGS3P49796 1198 aa22.78■■□□□ 1.24
PAX6-228ENST00000533333 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
PAX6-228ENST00000533333 KIAA2012Q0VF49 1180 aa22.77■■□□□ 1.24
PAX6-228ENST00000533333 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
PAX6-228ENST00000533333 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
PAX6-228ENST00000533333 GNL2Q13823 731 aaKnown RBP22.75■■□□□ 1.23
PAX6-228ENST00000533333 NOC3LQ8WTT2 800 aaKnown RBP22.75■■□□□ 1.23
PAX6-228ENST00000533333 U2SURPO15042 1029 aaKnown RBP22.69■■□□□ 1.22
PAX6-228ENST00000533333 MCCP23508 829 aa22.66■■□□□ 1.22
PAX6-228ENST00000533333 PDE4CQ08493 712 aa22.65■■□□□ 1.22
PAX6-228ENST00000533333 MSNP26038 577 aaKnown RBP22.64■■□□□ 1.22
PAX6-228ENST00000533333 MS4A1P11836 297 aa22.64■■□□□ 1.21
PAX6-228ENST00000533333 HSCBQ8IWL3 235 aa22.63■■□□□ 1.21
PAX6-228ENST00000533333 SOX12O15370 315 aa22.63■■□□□ 1.21
PAX6-228ENST00000533333 MIER1Q8N108 512 aa22.63■■□□□ 1.21
PAX6-228ENST00000533333 PLEKHD1A6NEE1 506 aa22.61■■□□□ 1.21
PAX6-228ENST00000533333 CARD11Q9BXL7 1154 aa22.6■■□□□ 1.21
PAX6-228ENST00000533333 TMX4Q9H1E5 349 aaPredicted RBP22.59■■□□□ 1.21
PAX6-228ENST00000533333 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
PAX6-228ENST00000533333 A0A0U1RQG5 324 aaPredicted RBP22.56■■□□□ 1.2
PAX6-228ENST00000533333 SPRYD3Q8NCJ5 442 aa22.55■■□□□ 1.2
PAX6-228ENST00000533333 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
PAX6-228ENST00000533333 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
PAX6-228ENST00000533333 KIAA1211Q6ZU35 1233 aa22.48■■□□□ 1.19
PAX6-228ENST00000533333 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
PAX6-228ENST00000533333 NOP58Q9Y2X3 529 aaKnown RBP22.48■■□□□ 1.19
PAX6-228ENST00000533333 APBB1O00213 710 aa22.46■■□□□ 1.19
PAX6-228ENST00000533333 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.18
PAX6-228ENST00000533333 KRI1Q8N9T8 703 aaKnown RBP22.44■■□□□ 1.18
PAX6-228ENST00000533333 G3V3G9 751 aa22.43■■□□□ 1.18
PAX6-228ENST00000533333 DCAF8Q5TAQ9 597 aa22.43■■□□□ 1.18
PAX6-228ENST00000533333 CFDP1Q9UEE9 299 aaPredicted RBP22.41■■□□□ 1.18
PAX6-228ENST00000533333 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
PAX6-228ENST00000533333 CFAP44Q96MT7 982 aa22.41■■□□□ 1.18
PAX6-228ENST00000533333 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
PAX6-228ENST00000533333 ARID3AQ99856 593 aa22.4■■□□□ 1.18
PAX6-228ENST00000533333 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
PAX6-228ENST00000533333 TPM4P67936 248 aa22.4■■□□□ 1.18
PAX6-228ENST00000533333 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
PAX6-228ENST00000533333 MLECQ14165 292 aa22.4■■□□□ 1.18
PAX6-228ENST00000533333 TNNT3P45378 269 aaPredicted RBP22.4■■□□□ 1.18
PAX6-228ENST00000533333 CEP89Q96ST8 783 aa22.4■■□□□ 1.18
PAX6-228ENST00000533333 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.18
PAX6-228ENST00000533333 RASSF8Q8NHQ8 419 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms