RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TDRD9Q8NDG6 1382 aaKnown RBP3.97□□□□□ -1.77
KNL1-211ENST00000533001 GRIN2AQ12879 1464 aa3.97□□□□□ -1.77
KNL1-211ENST00000533001 ABCC8Q09428 1581 aa3.96□□□□□ -1.78
KNL1-211ENST00000533001 ABCC10Q5T3U5 1492 aa3.96□□□□□ -1.78
KNL1-211ENST00000533001 MAP3K4Q9Y6R4 1608 aa3.96□□□□□ -1.78
KNL1-211ENST00000533001 ABCC2Q92887 1545 aa3.95□□□□□ -1.78
KNL1-211ENST00000533001 DISP1Q96F81 1524 aa3.94□□□□□ -1.78
KNL1-211ENST00000533001 FRMPD1Q5SYB0 1578 aa3.94□□□□□ -1.78
KNL1-211ENST00000533001 GRIN2BQ13224 1484 aa3.94□□□□□ -1.78
KNL1-211ENST00000533001 GLI2P10070 1586 aa3.94□□□□□ -1.78
KNL1-211ENST00000533001 TRIM41Q8WV44 630 aa3.94□□□□□ -1.78
KNL1-211ENST00000533001 ERICH3Q5RHP9 1530 aa3.93□□□□□ -1.78
KNL1-211ENST00000533001 ALKQ9UM73 1620 aa3.92□□□□□ -1.78
KNL1-211ENST00000533001 ADAMTSL3P82987 1691 aa3.92□□□□□ -1.78
KNL1-211ENST00000533001 SENP3Q9H4L4 574 aaPredicted RBP3.92□□□□□ -1.78
KNL1-211ENST00000533001 SOGA1O94964 1423 aa3.91□□□□□ -1.78
KNL1-211ENST00000533001 CYB5RLQ6IPT4 315 aa3.9□□□□□ -1.78
KNL1-211ENST00000533001 STRCQ7RTU9 1775 aa3.9□□□□□ -1.79
KNL1-211ENST00000533001 HECW2Q9P2P5 1572 aa3.88□□□□□ -1.79
KNL1-211ENST00000533001 IGF1RP08069 1367 aa3.87□□□□□ -1.79
KNL1-211ENST00000533001 UHRF1BP1LA0JNW5 1464 aa3.87□□□□□ -1.79
KNL1-211ENST00000533001 LRRIQ1Q96JM4 1722 aa3.86□□□□□ -1.79
KNL1-211ENST00000533001 ABCA8O94911 1581 aa3.86□□□□□ -1.79
KNL1-211ENST00000533001 RICTORQ6R327 1708 aa3.86□□□□□ -1.79
KNL1-211ENST00000533001 FHAD1B1AJZ9 1412 aa3.85□□□□□ -1.79
KNL1-211ENST00000533001 CUL7Q14999 1698 aa3.85□□□□□ -1.79
KNL1-211ENST00000533001 FER1L4A9Z1Z3 1794 aa3.84□□□□□ -1.79
KNL1-211ENST00000533001 LMTK3Q96Q04 1460 aa3.84□□□□□ -1.79
KNL1-211ENST00000533001 UGGT2Q9NYU1 1516 aa3.84□□□□□ -1.79
KNL1-211ENST00000533001 EPRSP07814 1512 aaKnown RBP3.84□□□□□ -1.8
KNL1-211ENST00000533001 KIAA0586Q9BVV6 1533 aa3.84□□□□□ -1.8
KNL1-211ENST00000533001 TSPOAP1O95153 1857 aa3.83□□□□□ -1.8
KNL1-211ENST00000533001 ZCCHC11Q5TAX3 1644 aaKnown RBP3.83□□□□□ -1.8
KNL1-211ENST00000533001 A0A0C4DFX4 3053 aa3.83□□□□□ -1.8
KNL1-211ENST00000533001 ILDR1Q86SU0 546 aaPredicted RBP3.82□□□□□ -1.8
KNL1-211ENST00000533001 KDM6BO15054 1643 aa3.82□□□□□ -1.8
KNL1-211ENST00000533001 SAMD9Q5K651 1589 aa3.82□□□□□ -1.8
KNL1-211ENST00000533001 ADGRL1O94910 1474 aa3.81□□□□□ -1.8
KNL1-211ENST00000533001 ABCA9Q8IUA7 1624 aa3.81□□□□□ -1.8
KNL1-211ENST00000533001 MAGI3Q5TCQ9 1506 aa3.81□□□□□ -1.8
KNL1-211ENST00000533001 ARAP3Q8WWN8 1544 aa3.81□□□□□ -1.8
KNL1-211ENST00000533001 BCORL1Q5H9F3 1711 aa3.81□□□□□ -1.8
KNL1-211ENST00000533001 PRG4Q92954 1404 aaPredicted RBP3.81□□□□□ -1.8
KNL1-211ENST00000533001 LTBP4Q8N2S1 1624 aa3.8□□□□□ -1.8
KNL1-211ENST00000533001 PRXQ9BXM0 1461 aa3.8□□□□□ -1.8
KNL1-211ENST00000533001 KIAA0556O60303 1618 aa3.8□□□□□ -1.8
KNL1-211ENST00000533001 MKI67P46013 3256 aaKnown RBP3.8□□□□□ -1.8
KNL1-211ENST00000533001 BRCA2P51587 3418 aa3.8□□□□□ -1.8
KNL1-211ENST00000533001 KIF21BO75037 1637 aa3.79□□□□□ -1.8
KNL1-211ENST00000533001 CFAP43Q8NDM7 1665 aa3.79□□□□□ -1.8
KNL1-211ENST00000533001 LAMA2P24043 3122 aaKnown RBP3.78□□□□□ -1.8
KNL1-211ENST00000533001 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
KNL1-211ENST00000533001 WRNQ14191 1432 aaPredicted RBP eCLIP3.77□□□□□ -1.81
KNL1-211ENST00000533001 ASXL2Q76L83 1435 aa3.77□□□□□ -1.81
KNL1-211ENST00000533001 ZMYM4Q5VZL5 1548 aa3.77□□□□□ -1.81
KNL1-211ENST00000533001 PLB1Q6P1J6 1458 aa3.77□□□□□ -1.81
KNL1-211ENST00000533001 JPH4Q96JJ6 628 aa3.76□□□□□ -1.81
KNL1-211ENST00000533001 CENPFP49454 3210 aa3.76□□□□□ -1.81
KNL1-211ENST00000533001 IQGAP2Q13576 1575 aa3.76□□□□□ -1.81
KNL1-211ENST00000533001 TTC37Q6PGP7 1564 aa3.76□□□□□ -1.81
KNL1-211ENST00000533001 MADDQ8WXG6 1647 aa3.75□□□□□ -1.81
KNL1-211ENST00000533001 STRCP1A6NGW2 1772 aa3.75□□□□□ -1.81
KNL1-211ENST00000533001 XIRP1Q702N8 1843 aaKnown RBP3.75□□□□□ -1.81
KNL1-211ENST00000533001 ATP10BO94823 1461 aa3.74□□□□□ -1.81
KNL1-211ENST00000533001 KDM5CP41229 1560 aa3.74□□□□□ -1.81
KNL1-211ENST00000533001 ARHGEF12Q9NZN5 1544 aa3.74□□□□□ -1.81
KNL1-211ENST00000533001 CTTNBP2Q8WZ74 1663 aa3.74□□□□□ -1.81
KNL1-211ENST00000533001 NUP153P49790 1475 aaKnown RBP3.74□□□□□ -1.81
KNL1-211ENST00000533001 PTPRMP28827 1452 aa3.73□□□□□ -1.81
KNL1-211ENST00000533001 REREQ9P2R6 1566 aa3.73□□□□□ -1.81
KNL1-211ENST00000533001 PCF11O94913 1555 aaKnown RBP3.73□□□□□ -1.81
KNL1-211ENST00000533001 ARHGEF40Q8TER5 1519 aa3.73□□□□□ -1.81
KNL1-211ENST00000533001 SETD1BQ9UPS6 1966 aaKnown RBP3.72□□□□□ -1.81
KNL1-211ENST00000533001 VCANP13611 3396 aa3.72□□□□□ -1.81
KNL1-211ENST00000533001 ILDR2Q71H61 639 aa3.72□□□□□ -1.81
KNL1-211ENST00000533001 RANBP2P49792 3224 aaKnown RBP3.72□□□□□ -1.81
KNL1-211ENST00000533001 CDC42BPBQ9Y5S2 1711 aa3.72□□□□□ -1.81
KNL1-211ENST00000533001 KIDINS220Q9ULH0 1771 aa3.71□□□□□ -1.82
KNL1-211ENST00000533001 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
KNL1-211ENST00000533001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.71□□□□□ -1.82
KNL1-211ENST00000533001 FHOD3Q2V2M9 1422 aa3.71□□□□□ -1.82
KNL1-211ENST00000533001 UACAQ9BZF9 1416 aa3.71□□□□□ -1.82
KNL1-211ENST00000533001 PLXNC1O60486 1568 aa3.71□□□□□ -1.82
KNL1-211ENST00000533001 WDR7Q9Y4E6 1490 aa3.7□□□□□ -1.82
KNL1-211ENST00000533001 NEURL4Q96JN8 1562 aa3.7□□□□□ -1.82
KNL1-211ENST00000533001 HTTP42858 3142 aa3.7□□□□□ -1.82
KNL1-211ENST00000533001 C3P01024 1663 aa3.7□□□□□ -1.82
KNL1-211ENST00000533001 YEATS2Q9ULM3 1422 aa3.68□□□□□ -1.82
KNL1-211ENST00000533001 CEP170BQ9Y4F5 1589 aaPredicted RBP3.68□□□□□ -1.82
KNL1-211ENST00000533001 LAMA3Q16787 3333 aa3.68□□□□□ -1.82
KNL1-211ENST00000533001 DIP2CQ9Y2E4 1556 aa3.68□□□□□ -1.82
KNL1-211ENST00000533001 ABCA6Q8N139 1617 aa3.68□□□□□ -1.82
KNL1-211ENST00000533001 EYSQ5T1H1 3165 aa3.68□□□□□ -1.82
KNL1-211ENST00000533001 ZC3H13Q5T200 1668 aaKnown RBP3.67□□□□□ -1.82
KNL1-211ENST00000533001 ZNF142P52746 1687 aaPredicted RBP3.67□□□□□ -1.82
KNL1-211ENST00000533001 MROH1Q8NDA8 1641 aa3.67□□□□□ -1.82
KNL1-211ENST00000533001 CHMP7Q8WUX9 453 aaPredicted RBP3.67□□□□□ -1.82
KNL1-211ENST00000533001 KIF14Q15058 1648 aa3.67□□□□□ -1.82
KNL1-211ENST00000533001 TCOF1Q13428 1488 aaKnown RBP3.66□□□□□ -1.82
KNL1-211ENST00000533001 HECW1Q76N89 1606 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms