RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 FAM69CQ0P6D2 419 aa25.91■■□□□ 1.74
CDC27-209ENST00000532893 NPM1P06748 294 aaKnown RBP eCLIP25.88■■□□□ 1.73
CDC27-209ENST00000532893 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
CDC27-209ENST00000532893 ABCC10Q5T3U5 1492 aa25.79■■□□□ 1.72
CDC27-209ENST00000532893 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
CDC27-209ENST00000532893 MAPKBP1O60336 1514 aa25.69■■□□□ 1.7
CDC27-209ENST00000532893 ADCY10Q96PN6 1610 aa25.66■■□□□ 1.7
CDC27-209ENST00000532893 DIP2BQ9P265 1576 aa25.65■■□□□ 1.7
CDC27-209ENST00000532893 KDM4FA0A1W2PPD8 638 aa25.65■■□□□ 1.7
CDC27-209ENST00000532893 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
CDC27-209ENST00000532893 IGF1RP08069 1367 aa25.63■■□□□ 1.69
CDC27-209ENST00000532893 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
CDC27-209ENST00000532893 KDM6BO15054 1643 aa25.56■■□□□ 1.68
CDC27-209ENST00000532893 PTPRGP23470 1445 aa25.54■■□□□ 1.68
CDC27-209ENST00000532893 TSPOAP1O95153 1857 aa25.53■■□□□ 1.68
CDC27-209ENST00000532893 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
CDC27-209ENST00000532893 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
CDC27-209ENST00000532893 CUL7Q14999 1698 aa25.43■■□□□ 1.66
CDC27-209ENST00000532893 TNIKQ9UKE5 1360 aa25.43■■□□□ 1.66
CDC27-209ENST00000532893 CARMIL2Q6F5E8 1435 aa25.41■■□□□ 1.66
CDC27-209ENST00000532893 ASXL2Q76L83 1435 aa25.39■■□□□ 1.66
CDC27-209ENST00000532893 ABCC2Q92887 1545 aa25.39■■□□□ 1.66
CDC27-209ENST00000532893 PLB1Q6P1J6 1458 aa25.35■■□□□ 1.65
CDC27-209ENST00000532893 ILDR1Q86SU0 546 aaPredicted RBP25.34■■□□□ 1.65
CDC27-209ENST00000532893 UACAQ9BZF9 1416 aa25.29■■□□□ 1.64
CDC27-209ENST00000532893 GLI2P10070 1586 aa25.29■■□□□ 1.64
CDC27-209ENST00000532893 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
CDC27-209ENST00000532893 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
CDC27-209ENST00000532893 PPRC1Q5VV67 1664 aaKnown RBP25.26■■□□□ 1.63
CDC27-209ENST00000532893 COL17A1Q9UMD9 1497 aaPredicted RBP25.25■■□□□ 1.63
CDC27-209ENST00000532893 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
CDC27-209ENST00000532893 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
CDC27-209ENST00000532893 EPRSP07814 1512 aaKnown RBP25.21■■□□□ 1.63
CDC27-209ENST00000532893 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
CDC27-209ENST00000532893 TEX14Q8IWB6 1497 aa25.13■■□□□ 1.61
CDC27-209ENST00000532893 MAP3K4Q9Y6R4 1608 aa25.11■■□□□ 1.61
CDC27-209ENST00000532893 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
CDC27-209ENST00000532893 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
CDC27-209ENST00000532893 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
CDC27-209ENST00000532893 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.6
CDC27-209ENST00000532893 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
CDC27-209ENST00000532893 KIAA0556O60303 1618 aa25.03■■□□□ 1.6
CDC27-209ENST00000532893 WDR7Q9Y4E6 1490 aa25.02■■□□□ 1.6
CDC27-209ENST00000532893 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
CDC27-209ENST00000532893 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
CDC27-209ENST00000532893 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
CDC27-209ENST00000532893 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
CDC27-209ENST00000532893 ABCA8O94911 1581 aa24.85■■□□□ 1.57
CDC27-209ENST00000532893 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
CDC27-209ENST00000532893 CFAP43Q8NDM7 1665 aa24.84■■□□□ 1.57
CDC27-209ENST00000532893 CTTNBP2Q8WZ74 1663 aa24.79■■□□□ 1.56
CDC27-209ENST00000532893 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
CDC27-209ENST00000532893 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
CDC27-209ENST00000532893 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
CDC27-209ENST00000532893 KIF21BO75037 1637 aa24.75■■□□□ 1.55
CDC27-209ENST00000532893 ARAP3Q8WWN8 1544 aa24.74■■□□□ 1.55
CDC27-209ENST00000532893 ATP10BO94823 1461 aa24.72■■□□□ 1.55
CDC27-209ENST00000532893 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
CDC27-209ENST00000532893 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
CDC27-209ENST00000532893 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
CDC27-209ENST00000532893 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
CDC27-209ENST00000532893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
CDC27-209ENST00000532893 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
CDC27-209ENST00000532893 PTPRMP28827 1452 aa24.64■■□□□ 1.53
CDC27-209ENST00000532893 ARID4BQ4LE39 1312 aaPredicted RBP24.62■■□□□ 1.53
CDC27-209ENST00000532893 ABCA9Q8IUA7 1624 aa24.59■■□□□ 1.53
CDC27-209ENST00000532893 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
CDC27-209ENST00000532893 NEO1Q92859 1461 aa24.56■■□□□ 1.52
CDC27-209ENST00000532893 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
CDC27-209ENST00000532893 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
CDC27-209ENST00000532893 RAPGEF6Q8TEU7 1601 aa24.49■■□□□ 1.51
CDC27-209ENST00000532893 BCORL1Q5H9F3 1711 aa24.47■■□□□ 1.51
CDC27-209ENST00000532893 PLEKHD1A6NEE1 506 aa24.46■■□□□ 1.51
CDC27-209ENST00000532893 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
CDC27-209ENST00000532893 FRMPD1Q5SYB0 1578 aa24.46■■□□□ 1.51
CDC27-209ENST00000532893 MADDQ8WXG6 1647 aa24.45■■□□□ 1.5
CDC27-209ENST00000532893 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
CDC27-209ENST00000532893 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
CDC27-209ENST00000532893 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
CDC27-209ENST00000532893 LMTK3Q96Q04 1460 aa24.43■■□□□ 1.5
CDC27-209ENST00000532893 HSPA2P54652 639 aa24.42■■□□□ 1.5
CDC27-209ENST00000532893 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
CDC27-209ENST00000532893 AKNAQ7Z591 1439 aa24.41■■□□□ 1.5
CDC27-209ENST00000532893 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
CDC27-209ENST00000532893 FANCAO15360 1455 aa24.35■■□□□ 1.49
CDC27-209ENST00000532893 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
CDC27-209ENST00000532893 RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
CDC27-209ENST00000532893 MLECQ14165 292 aa24.33■■□□□ 1.49
CDC27-209ENST00000532893 POGZQ7Z3K3 1410 aa24.32■■□□□ 1.48
CDC27-209ENST00000532893 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
CDC27-209ENST00000532893 YEATS2Q9ULM3 1422 aa24.3■■□□□ 1.48
CDC27-209ENST00000532893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
CDC27-209ENST00000532893 CERKQ8TCT0 537 aa24.26■■□□□ 1.47
CDC27-209ENST00000532893 ZFYVE16Q7Z3T8 1539 aa24.25■■□□□ 1.47
CDC27-209ENST00000532893 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
CDC27-209ENST00000532893 TTC37Q6PGP7 1564 aa24.23■■□□□ 1.47
CDC27-209ENST00000532893 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
CDC27-209ENST00000532893 MAGI2Q86UL8 1455 aa24.22■■□□□ 1.47
CDC27-209ENST00000532893 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
CDC27-209ENST00000532893 EFCAB5A4FU69 1503 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms