RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 IGF1RP08069 1367 aa29.96■■■□□ 2.39
RPUSD4-207ENST00000532800 CUL7Q14999 1698 aa29.95■■■□□ 2.38
RPUSD4-207ENST00000532800 KIAA0586Q9BVV6 1533 aa29.86■■■□□ 2.37
RPUSD4-207ENST00000532800 KIF13AQ9H1H9 1805 aa29.86■■■□□ 2.37
RPUSD4-207ENST00000532800 ADCY10Q96PN6 1610 aa29.78■■■□□ 2.36
RPUSD4-207ENST00000532800 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
RPUSD4-207ENST00000532800 MAPKBP1O60336 1514 aa29.71■■■□□ 2.35
RPUSD4-207ENST00000532800 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
RPUSD4-207ENST00000532800 NPM1P06748 294 aaKnown RBP eCLIP29.67■■■□□ 2.34
RPUSD4-207ENST00000532800 DIP2BQ9P265 1576 aa29.64■■■□□ 2.33
RPUSD4-207ENST00000532800 IQGAP2Q13576 1575 aa29.62■■■□□ 2.33
RPUSD4-207ENST00000532800 FAM69CQ0P6D2 419 aa29.62■■■□□ 2.33
RPUSD4-207ENST00000532800 PTPRGP23470 1445 aa29.59■■■□□ 2.33
RPUSD4-207ENST00000532800 TTBK1Q5TCY1 1321 aaPredicted RBP29.57■■■□□ 2.32
RPUSD4-207ENST00000532800 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
RPUSD4-207ENST00000532800 CARMIL2Q6F5E8 1435 aa29.55■■■□□ 2.32
RPUSD4-207ENST00000532800 TNIKQ9UKE5 1360 aa29.53■■■□□ 2.32
RPUSD4-207ENST00000532800 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
RPUSD4-207ENST00000532800 DISP1Q96F81 1524 aa29.48■■■□□ 2.31
RPUSD4-207ENST00000532800 TSPOAP1O95153 1857 aa29.46■■■□□ 2.31
RPUSD4-207ENST00000532800 ABCC2Q92887 1545 aa29.45■■■□□ 2.31
RPUSD4-207ENST00000532800 UGGT2Q9NYU1 1516 aa29.42■■■□□ 2.3
RPUSD4-207ENST00000532800 UHRF1BP1LA0JNW5 1464 aa29.39■■■□□ 2.3
RPUSD4-207ENST00000532800 KDM6BO15054 1643 aa29.38■■■□□ 2.29
RPUSD4-207ENST00000532800 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
RPUSD4-207ENST00000532800 KIAA0556O60303 1618 aa29.37■■■□□ 2.29
RPUSD4-207ENST00000532800 ASXL2Q76L83 1435 aa29.36■■■□□ 2.29
RPUSD4-207ENST00000532800 CTTNBP2Q8WZ74 1663 aa29.33■■■□□ 2.29
RPUSD4-207ENST00000532800 PLB1Q6P1J6 1458 aa29.31■■■□□ 2.28
RPUSD4-207ENST00000532800 PPRC1Q5VV67 1664 aaKnown RBP29.27■■■□□ 2.28
RPUSD4-207ENST00000532800 GLI2P10070 1586 aa29.26■■■□□ 2.28
RPUSD4-207ENST00000532800 KDM5BQ9UGL1 1544 aa29.26■■■□□ 2.27
RPUSD4-207ENST00000532800 ZCCHC11Q5TAX3 1644 aaKnown RBP29.25■■■□□ 2.27
RPUSD4-207ENST00000532800 PRXQ9BXM0 1461 aa29.22■■■□□ 2.27
RPUSD4-207ENST00000532800 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
RPUSD4-207ENST00000532800 MAP3K4Q9Y6R4 1608 aa29.15■■■□□ 2.26
RPUSD4-207ENST00000532800 GOLGA3Q08378 1498 aa29.14■■■□□ 2.26
RPUSD4-207ENST00000532800 ABCA8O94911 1581 aa29.09■■■□□ 2.25
RPUSD4-207ENST00000532800 WDR7Q9Y4E6 1490 aa29.07■■■□□ 2.24
RPUSD4-207ENST00000532800 KDM4FA0A1W2PPD8 638 aa29.05■■■□□ 2.24
RPUSD4-207ENST00000532800 COL17A1Q9UMD9 1497 aaPredicted RBP29.04■■■□□ 2.24
RPUSD4-207ENST00000532800 TEX14Q8IWB6 1497 aa29.01■■■□□ 2.23
RPUSD4-207ENST00000532800 CSRNP3Q8WYN3 585 aa28.94■■■□□ 2.22
RPUSD4-207ENST00000532800 P3H3Q8IVL6 736 aa28.93■■■□□ 2.22
RPUSD4-207ENST00000532800 CFAP43Q8NDM7 1665 aa28.91■■■□□ 2.22
RPUSD4-207ENST00000532800 SAMD9Q5K651 1589 aa28.89■■■□□ 2.22
RPUSD4-207ENST00000532800 KCNH8Q96L42 1107 aa28.89■■■□□ 2.22
RPUSD4-207ENST00000532800 CD109Q6YHK3 1445 aa28.87■■■□□ 2.21
RPUSD4-207ENST00000532800 ARID3CA6NKF2 412 aa28.87■■■□□ 2.21
RPUSD4-207ENST00000532800 MAGI3Q5TCQ9 1506 aa28.86■■■□□ 2.21
RPUSD4-207ENST00000532800 ADGRL1O94910 1474 aa28.85■■■□□ 2.21
RPUSD4-207ENST00000532800 ATP10BO94823 1461 aa28.83■■■□□ 2.21
RPUSD4-207ENST00000532800 EEA1Q15075 1411 aa28.82■■■□□ 2.2
RPUSD4-207ENST00000532800 RAPGEF6Q8TEU7 1601 aa28.78■■■□□ 2.2
RPUSD4-207ENST00000532800 FAM9AQ8IZU1 332 aaPredicted RBP28.75■■■□□ 2.19
RPUSD4-207ENST00000532800 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
RPUSD4-207ENST00000532800 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
RPUSD4-207ENST00000532800 ABCA9Q8IUA7 1624 aa28.7■■■□□ 2.19
RPUSD4-207ENST00000532800 NUP153P49790 1475 aaKnown RBP28.67■■■□□ 2.18
RPUSD4-207ENST00000532800 KIF21BO75037 1637 aa28.66■■■□□ 2.18
RPUSD4-207ENST00000532800 ARAP3Q8WWN8 1544 aa28.63■■■□□ 2.17
RPUSD4-207ENST00000532800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
RPUSD4-207ENST00000532800 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
RPUSD4-207ENST00000532800 EFCAB5A4FU69 1503 aa28.57■■■□□ 2.16
RPUSD4-207ENST00000532800 NEO1Q92859 1461 aa28.51■■■□□ 2.15
RPUSD4-207ENST00000532800 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
RPUSD4-207ENST00000532800 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
RPUSD4-207ENST00000532800 FRMPD1Q5SYB0 1578 aa28.47■■■□□ 2.15
RPUSD4-207ENST00000532800 HECW2Q9P2P5 1572 aa28.47■■■□□ 2.15
RPUSD4-207ENST00000532800 RAPGEF3O95398 923 aa28.47■■■□□ 2.15
RPUSD4-207ENST00000532800 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
RPUSD4-207ENST00000532800 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
RPUSD4-207ENST00000532800 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
RPUSD4-207ENST00000532800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.14
RPUSD4-207ENST00000532800 TTC37Q6PGP7 1564 aa28.4■■■□□ 2.14
RPUSD4-207ENST00000532800 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
RPUSD4-207ENST00000532800 RICTORQ6R327 1708 aa28.35■■■□□ 2.13
RPUSD4-207ENST00000532800 FANCAO15360 1455 aa28.34■■■□□ 2.13
RPUSD4-207ENST00000532800 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
RPUSD4-207ENST00000532800 CFAP74Q9C0B2 1584 aa28.34■■■□□ 2.13
RPUSD4-207ENST00000532800 ADAMTSL3P82987 1691 aa28.34■■■□□ 2.13
RPUSD4-207ENST00000532800 AKNAQ7Z591 1439 aa28.33■■■□□ 2.13
RPUSD4-207ENST00000532800 DENND4BO75064 1496 aaPredicted RBP28.32■■■□□ 2.12
RPUSD4-207ENST00000532800 HECW1Q76N89 1606 aa28.3■■■□□ 2.12
RPUSD4-207ENST00000532800 ARHGEF40Q8TER5 1519 aa28.3■■■□□ 2.12
RPUSD4-207ENST00000532800 BCORL1Q5H9F3 1711 aa28.29■■■□□ 2.12
RPUSD4-207ENST00000532800 FMN1Q68DA7 1419 aa28.28■■■□□ 2.12
RPUSD4-207ENST00000532800 PTPRMP28827 1452 aa28.26■■■□□ 2.11
RPUSD4-207ENST00000532800 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
RPUSD4-207ENST00000532800 MADDQ8WXG6 1647 aa28.24■■■□□ 2.11
RPUSD4-207ENST00000532800 ARID4BQ4LE39 1312 aaPredicted RBP28.22■■■□□ 2.11
RPUSD4-207ENST00000532800 ZMYM4Q5VZL5 1548 aa28.22■■■□□ 2.11
RPUSD4-207ENST00000532800 PLCH2O75038 1416 aa28.19■■■□□ 2.1
RPUSD4-207ENST00000532800 LRRIQ1Q96JM4 1722 aa28.19■■■□□ 2.1
RPUSD4-207ENST00000532800 KIF14Q15058 1648 aa28.18■■■□□ 2.1
RPUSD4-207ENST00000532800 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
RPUSD4-207ENST00000532800 SIGLEC1Q9BZZ2 1709 aa28.17■■■□□ 2.1
RPUSD4-207ENST00000532800 MYO5CQ9NQX4 1742 aa28.17■■■□□ 2.1
RPUSD4-207ENST00000532800 ZFYVE16Q7Z3T8 1539 aa28.17■■■□□ 2.1
RPUSD4-207ENST00000532800 YEATS2Q9ULM3 1422 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms