RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 NESP48681 1621 aa16.09■□□□□ 0.17
CDC27-208ENST00000532575 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
CDC27-208ENST00000532575 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
CDC27-208ENST00000532575 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
CDC27-208ENST00000532575 IFNLR1Q8IU57 520 aaPredicted RBP16.06■□□□□ 0.16
CDC27-208ENST00000532575 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
CDC27-208ENST00000532575 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
CDC27-208ENST00000532575 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
CDC27-208ENST00000532575 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
CDC27-208ENST00000532575 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
CDC27-208ENST00000532575 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
CDC27-208ENST00000532575 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
CDC27-208ENST00000532575 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
CDC27-208ENST00000532575 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
CDC27-208ENST00000532575 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
CDC27-208ENST00000532575 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
CDC27-208ENST00000532575 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
CDC27-208ENST00000532575 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
CDC27-208ENST00000532575 SPOCK2Q92563 424 aa15.85■□□□□ 0.13
CDC27-208ENST00000532575 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDC27-208ENST00000532575 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
CDC27-208ENST00000532575 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
CDC27-208ENST00000532575 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
CDC27-208ENST00000532575 NUBP1P53384 320 aa15.76■□□□□ 0.11
CDC27-208ENST00000532575 WDR62O43379 1518 aa15.73■□□□□ 0.11
CDC27-208ENST00000532575 POTEHQ6S545 545 aa15.69■□□□□ 0.1
CDC27-208ENST00000532575 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
CDC27-208ENST00000532575 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
CDC27-208ENST00000532575 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
CDC27-208ENST00000532575 WIZO95785 1651 aa15.66■□□□□ 0.1
CDC27-208ENST00000532575 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
CDC27-208ENST00000532575 RTN4Q9NQC3 1192 aaKnown RBP15.64■□□□□ 0.09
CDC27-208ENST00000532575 CFTRP13569 1480 aa15.61■□□□□ 0.09
CDC27-208ENST00000532575 FAM212AQ96EL1 285 aa15.6■□□□□ 0.09
CDC27-208ENST00000532575 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
CDC27-208ENST00000532575 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
CDC27-208ENST00000532575 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
CDC27-208ENST00000532575 GSE1Q14687 1217 aa15.57■□□□□ 0.08
CDC27-208ENST00000532575 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
CDC27-208ENST00000532575 CD44P16070 742 aaKnown RBP15.56■□□□□ 0.08
CDC27-208ENST00000532575 PKD2Q13563 968 aa15.54■□□□□ 0.08
CDC27-208ENST00000532575 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
CDC27-208ENST00000532575 HAX1O00165 279 aa15.52■□□□□ 0.08
CDC27-208ENST00000532575 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
CDC27-208ENST00000532575 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
CDC27-208ENST00000532575 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
CDC27-208ENST00000532575 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
CDC27-208ENST00000532575 CCDC61Q9Y6R9 512 aa15.47■□□□□ 0.07
CDC27-208ENST00000532575 EVX2Q03828 476 aa15.43■□□□□ 0.06
CDC27-208ENST00000532575 ECM2O94769 699 aaPredicted RBP15.42■□□□□ 0.06
CDC27-208ENST00000532575 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
CDC27-208ENST00000532575 PYGBP11216 843 aa15.4■□□□□ 0.06
CDC27-208ENST00000532575 CHRM1P11229 460 aaPredicted RBP15.36■□□□□ 0.05
CDC27-208ENST00000532575 ZNF579Q8NAF0 562 aaKnown RBP15.36■□□□□ 0.05
CDC27-208ENST00000532575 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
CDC27-208ENST00000532575 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
CDC27-208ENST00000532575 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
CDC27-208ENST00000532575 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
CDC27-208ENST00000532575 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
CDC27-208ENST00000532575 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
CDC27-208ENST00000532575 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
CDC27-208ENST00000532575 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
CDC27-208ENST00000532575 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
CDC27-208ENST00000532575 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
CDC27-208ENST00000532575 RGL2O15211 777 aa15.3■□□□□ 0.04
CDC27-208ENST00000532575 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
CDC27-208ENST00000532575 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
CDC27-208ENST00000532575 MAP3K13O43283 966 aa15.27■□□□□ 0.04
CDC27-208ENST00000532575 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
CDC27-208ENST00000532575 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
CDC27-208ENST00000532575 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
CDC27-208ENST00000532575 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.037e-9■■■■■ 34.8
CDC27-208ENST00000532575 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
CDC27-208ENST00000532575 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
CDC27-208ENST00000532575 MS4A3Q96HJ5 214 aa15.19■□□□□ 0.02
CDC27-208ENST00000532575 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
CDC27-208ENST00000532575 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
CDC27-208ENST00000532575 PCDHB8Q9UN66 801 aa15.18■□□□□ 0.02
CDC27-208ENST00000532575 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
CDC27-208ENST00000532575 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
CDC27-208ENST00000532575 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
CDC27-208ENST00000532575 CLCN6P51797 869 aa15.14■□□□□ 0.01
CDC27-208ENST00000532575 GALR2O43603 387 aaPredicted RBP15.13■□□□□ 0.01
CDC27-208ENST00000532575 SOGA1O94964 1423 aa15.13■□□□□ 0.01
CDC27-208ENST00000532575 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
CDC27-208ENST00000532575 GABBR2O75899 941 aa15.12■□□□□ 0.01
CDC27-208ENST00000532575 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
CDC27-208ENST00000532575 CHD1O14646 1710 aa15.1■□□□□ 0.01
CDC27-208ENST00000532575 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
CDC27-208ENST00000532575 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
CDC27-208ENST00000532575 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
CDC27-208ENST00000532575 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0.01
CDC27-208ENST00000532575 TRPC6Q9Y210 931 aa15.07■□□□□ 0
CDC27-208ENST00000532575 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
CDC27-208ENST00000532575 PDAP1Q13442 181 aaKnown RBP15.05■□□□□ -0
CDC27-208ENST00000532575 WDR97A6NE52 1622 aa15.04■□□□□ -0
CDC27-208ENST00000532575 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
CDC27-208ENST00000532575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
CDC27-208ENST00000532575 PSEN1P49768 467 aa15.03■□□□□ -0
CDC27-208ENST00000532575 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms