RNA–Protein interactions for RNA: ENST00000532485.5

ACER3-212, Transcript of alkaline ceramidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACER3, Length 7,378 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-212ENST00000532485 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
ACER3-212ENST00000532485 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
ACER3-212ENST00000532485 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
ACER3-212ENST00000532485 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
ACER3-212ENST00000532485 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
ACER3-212ENST00000532485 FOXD1Q16676 465 aa12.14□□□□□ -0.47
ACER3-212ENST00000532485 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
ACER3-212ENST00000532485 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
ACER3-212ENST00000532485 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
ACER3-212ENST00000532485 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
ACER3-212ENST00000532485 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
ACER3-212ENST00000532485 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
ACER3-212ENST00000532485 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
ACER3-212ENST00000532485 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACER3-212ENST00000532485 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
ACER3-212ENST00000532485 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
ACER3-212ENST00000532485 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACER3-212ENST00000532485 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
ACER3-212ENST00000532485 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
ACER3-212ENST00000532485 FKBP8Q14318 412 aa12.05□□□□□ -0.48
ACER3-212ENST00000532485 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
ACER3-212ENST00000532485 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
ACER3-212ENST00000532485 NESP48681 1621 aa11.99□□□□□ -0.49
ACER3-212ENST00000532485 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
ACER3-212ENST00000532485 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
ACER3-212ENST00000532485 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
ACER3-212ENST00000532485 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
ACER3-212ENST00000532485 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
ACER3-212ENST00000532485 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
ACER3-212ENST00000532485 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
ACER3-212ENST00000532485 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.5
ACER3-212ENST00000532485 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
ACER3-212ENST00000532485 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
ACER3-212ENST00000532485 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
ACER3-212ENST00000532485 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
ACER3-212ENST00000532485 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
ACER3-212ENST00000532485 IGF1RP08069 1367 aa11.92□□□□□ -0.5
ACER3-212ENST00000532485 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
ACER3-212ENST00000532485 HNRNPMP52272 730 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■■■■ 27.5
ACER3-212ENST00000532485 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
ACER3-212ENST00000532485 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
ACER3-212ENST00000532485 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
ACER3-212ENST00000532485 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
ACER3-212ENST00000532485 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.512e-12■■■■■ 32.2
ACER3-212ENST00000532485 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
ACER3-212ENST00000532485 ARHGAP35Q9NRY4 1499 aa11.87□□□□□ -0.51
ACER3-212ENST00000532485 SETD5Q9C0A6 1442 aa11.87□□□□□ -0.51
ACER3-212ENST00000532485 MLECQ14165 292 aa11.86□□□□□ -0.51
ACER3-212ENST00000532485 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
ACER3-212ENST00000532485 PKD2Q13563 968 aa11.85□□□□□ -0.51
ACER3-212ENST00000532485 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
ACER3-212ENST00000532485 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
ACER3-212ENST00000532485 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
ACER3-212ENST00000532485 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
ACER3-212ENST00000532485 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
ACER3-212ENST00000532485 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
ACER3-212ENST00000532485 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
ACER3-212ENST00000532485 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
ACER3-212ENST00000532485 GGT6Q6P531 493 aa11.81□□□□□ -0.52
ACER3-212ENST00000532485 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
ACER3-212ENST00000532485 CC2D1BQ5T0F9 858 aaKnown RBP11.8□□□□□ -0.52
ACER3-212ENST00000532485 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
ACER3-212ENST00000532485 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
ACER3-212ENST00000532485 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
ACER3-212ENST00000532485 GAPVD1Q14C86 1478 aa11.79□□□□□ -0.52
ACER3-212ENST00000532485 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
ACER3-212ENST00000532485 L3MBTL2Q969R5 705 aa11.78□□□□□ -0.52
ACER3-212ENST00000532485 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
ACER3-212ENST00000532485 CUX1P39880 1505 aa11.78□□□□□ -0.52
ACER3-212ENST00000532485 KIF21BO75037 1637 aa11.78□□□□□ -0.52
ACER3-212ENST00000532485 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
ACER3-212ENST00000532485 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
ACER3-212ENST00000532485 PHLDB1Q86UU1 1377 aa11.76□□□□□ -0.53
ACER3-212ENST00000532485 CFTRP13569 1480 aa11.76□□□□□ -0.53
ACER3-212ENST00000532485 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
ACER3-212ENST00000532485 NUP155O75694 1391 aa11.75□□□□□ -0.53
ACER3-212ENST00000532485 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
ACER3-212ENST00000532485 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.537e-25■■■■■ 56.8
ACER3-212ENST00000532485 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
ACER3-212ENST00000532485 MYT1Q01538 1121 aa11.72□□□□□ -0.53
ACER3-212ENST00000532485 CCDC136Q96JN2 1154 aa11.71□□□□□ -0.53
ACER3-212ENST00000532485 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
ACER3-212ENST00000532485 STK26Q9P289 416 aa11.71□□□□□ -0.54
ACER3-212ENST00000532485 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
ACER3-212ENST00000532485 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
ACER3-212ENST00000532485 KIF3BO15066 747 aa11.69□□□□□ -0.54
ACER3-212ENST00000532485 NEFMP07197 916 aa11.69□□□□□ -0.54
ACER3-212ENST00000532485 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
ACER3-212ENST00000532485 SOX12O15370 315 aa11.68□□□□□ -0.54
ACER3-212ENST00000532485 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
ACER3-212ENST00000532485 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
ACER3-212ENST00000532485 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
ACER3-212ENST00000532485 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
ACER3-212ENST00000532485 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
ACER3-212ENST00000532485 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
ACER3-212ENST00000532485 EFCAB2Q5VUJ9 269 aa11.64□□□□□ -0.55
ACER3-212ENST00000532485 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
ACER3-212ENST00000532485 PTPRGP23470 1445 aa11.63□□□□□ -0.55
ACER3-212ENST00000532485 LRRC9Q6ZRR7 1453 aa11.62□□□□□ -0.55
ACER3-212ENST00000532485 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms