RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 NUP160Q12769 1436 aa35.21■■■■□ 3.23
PACSIN3-209ENST00000532457 CEP162Q5TB80 1403 aa35.18■■■■□ 3.22
PACSIN3-209ENST00000532457 CEP170Q5SW79 1584 aa35.16■■■■□ 3.22
PACSIN3-209ENST00000532457 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
PACSIN3-209ENST00000532457 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
PACSIN3-209ENST00000532457 KIAA0586Q9BVV6 1533 aa35.05■■■■□ 3.2
PACSIN3-209ENST00000532457 CLIP1P30622 1438 aa34.99■■■■□ 3.19
PACSIN3-209ENST00000532457 DNAJC5Q9H3Z4 198 aa34.96■■■■□ 3.19
PACSIN3-209ENST00000532457 CTTNBP2Q8WZ74 1663 aa34.94■■■■□ 3.18
PACSIN3-209ENST00000532457 IQGAP2Q13576 1575 aa34.92■■■■□ 3.18
PACSIN3-209ENST00000532457 JPH4Q96JJ6 628 aa34.91■■■■□ 3.18
PACSIN3-209ENST00000532457 SHROOM2Q13796 1616 aa34.85■■■■□ 3.17
PACSIN3-209ENST00000532457 ARHGAP35Q9NRY4 1499 aa34.8■■■■□ 3.16
PACSIN3-209ENST00000532457 PRG4Q92954 1404 aaPredicted RBP34.76■■■■□ 3.16
PACSIN3-209ENST00000532457 ARHGEF11O15085 1522 aa34.75■■■■□ 3.15
PACSIN3-209ENST00000532457 UGGT2Q9NYU1 1516 aa34.74■■■■□ 3.15
PACSIN3-209ENST00000532457 ARAP1Q96P48 1450 aa34.74■■■■□ 3.15
PACSIN3-209ENST00000532457 CARMIL2Q6F5E8 1435 aa34.7■■■■□ 3.15
PACSIN3-209ENST00000532457 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
PACSIN3-209ENST00000532457 RIMBP3CA6NJZ7 1639 aa34.67■■■■□ 3.14
PACSIN3-209ENST00000532457 RIMBP3BA6NNM3 1639 aa34.67■■■■□ 3.14
PACSIN3-209ENST00000532457 RIMBP3Q9UFD9 1639 aa34.67■■■■□ 3.14
PACSIN3-209ENST00000532457 ERCC6L2Q5T890 1561 aa34.61■■■■□ 3.13
PACSIN3-209ENST00000532457 VPS8Q8N3P4 1428 aa34.61■■■■□ 3.13
PACSIN3-209ENST00000532457 DISP1Q96F81 1524 aa34.6■■■■□ 3.13
PACSIN3-209ENST00000532457 KIAA0556O60303 1618 aa34.56■■■■□ 3.12
PACSIN3-209ENST00000532457 EFCAB5A4FU69 1503 aa34.56■■■■□ 3.12
PACSIN3-209ENST00000532457 FHOD3Q2V2M9 1422 aa34.55■■■■□ 3.12
PACSIN3-209ENST00000532457 SAMD9Q5K651 1589 aa34.54■■■■□ 3.12
PACSIN3-209ENST00000532457 PPARGC1BQ86YN6 1023 aaKnown RBP34.48■■■■□ 3.11
PACSIN3-209ENST00000532457 CYB5RLQ6IPT4 315 aa34.45■■■■□ 3.11
PACSIN3-209ENST00000532457 PTPRGP23470 1445 aa34.44■■■■□ 3.1
PACSIN3-209ENST00000532457 TTBK1Q5TCY1 1321 aaPredicted RBP34.4■■■■□ 3.1
PACSIN3-209ENST00000532457 FMN1Q68DA7 1419 aa34.28■■■■□ 3.08
PACSIN3-209ENST00000532457 PCF11O94913 1555 aaKnown RBP34.24■■■■□ 3.07
PACSIN3-209ENST00000532457 UACAQ9BZF9 1416 aa34.22■■■■□ 3.07
PACSIN3-209ENST00000532457 CASKIN1Q8WXD9 1431 aa34.22■■■■□ 3.07
PACSIN3-209ENST00000532457 APLP2Q06481 763 aa34.21■■■■□ 3.07
PACSIN3-209ENST00000532457 ATP1B4Q9UN42 357 aaPredicted RBP34.2■■■■□ 3.07
PACSIN3-209ENST00000532457 KANK4Q5T7N3 995 aaPredicted RBP34.16■■■■□ 3.06
PACSIN3-209ENST00000532457 PLB1Q6P1J6 1458 aa34.16■■■■□ 3.06
PACSIN3-209ENST00000532457 FYCO1Q9BQS8 1478 aa34.15■■■■□ 3.06
PACSIN3-209ENST00000532457 UHRF1BP1LA0JNW5 1464 aa34.14■■■■□ 3.06
PACSIN3-209ENST00000532457 ABCC2Q92887 1545 aa34.13■■■■□ 3.05
PACSIN3-209ENST00000532457 ABCA8O94911 1581 aa34.13■■■■□ 3.05
PACSIN3-209ENST00000532457 ADCY10Q96PN6 1610 aa34.12■■■■□ 3.05
PACSIN3-209ENST00000532457 NPM1P06748 294 aaKnown RBP eCLIP34.09■■■■□ 3.05
PACSIN3-209ENST00000532457 RAPGEF6Q8TEU7 1601 aa34.09■■■■□ 3.05
PACSIN3-209ENST00000532457 MAP3K1Q13233 1512 aa34.04■■■■□ 3.04
PACSIN3-209ENST00000532457 TIAM1Q13009 1591 aa34.04■■■■□ 3.04
PACSIN3-209ENST00000532457 LRRIQ1Q96JM4 1722 aa34.03■■■■□ 3.04
PACSIN3-209ENST00000532457 TRIM26Q12899 539 aaPredicted RBP34.02■■■■□ 3.04
PACSIN3-209ENST00000532457 PCGF6Q9BYE7 350 aa33.98■■■■□ 3.03
PACSIN3-209ENST00000532457 KDM5BQ9UGL1 1544 aa33.98■■■■□ 3.03
PACSIN3-209ENST00000532457 NUP153P49790 1475 aaKnown RBP33.95■■■■□ 3.03
PACSIN3-209ENST00000532457 HECW1Q76N89 1606 aa33.95■■■■□ 3.02
PACSIN3-209ENST00000532457 ARID3CA6NKF2 412 aa33.95■■■■□ 3.02
PACSIN3-209ENST00000532457 CFAP43Q8NDM7 1665 aa33.93■■■■□ 3.02
PACSIN3-209ENST00000532457 LRRC9Q6ZRR7 1453 aa33.92■■■■□ 3.02
PACSIN3-209ENST00000532457 EPRSP07814 1512 aaKnown RBP33.9■■■■□ 3.02
PACSIN3-209ENST00000532457 ZCCHC11Q5TAX3 1644 aaKnown RBP33.89■■■■□ 3.02
PACSIN3-209ENST00000532457 ATP10BO94823 1461 aa33.88■■■■□ 3.01
PACSIN3-209ENST00000532457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.88■■■■□ 3.01
PACSIN3-209ENST00000532457 HNRNPUL2Q1KMD3 747 aaKnown RBP33.88■■■■□ 3.01
PACSIN3-209ENST00000532457 CDK13Q14004 1512 aaKnown RBP33.87■■■■□ 3.01
PACSIN3-209ENST00000532457 MAPKBP1O60336 1514 aa33.84■■■■□ 3.01
PACSIN3-209ENST00000532457 CCDC18Q5T9S5 1454 aa33.82■■■■□ 3.01
PACSIN3-209ENST00000532457 MAGI3Q5TCQ9 1506 aa33.78■■■■□ 3
PACSIN3-209ENST00000532457 ASXL2Q76L83 1435 aa33.77■■■■□ 3
PACSIN3-209ENST00000532457 CDK11AQ9UQ88 783 aaPredicted RBP33.76■■■□□ 2.99
PACSIN3-209ENST00000532457 MTUS2Q5JR59 1369 aa33.74■■■□□ 2.99
PACSIN3-209ENST00000532457 PLEKHD1A6NEE1 506 aa33.72■■■□□ 2.99
PACSIN3-209ENST00000532457 WDR7Q9Y4E6 1490 aa33.69■■■□□ 2.98
PACSIN3-209ENST00000532457 PHLDB1Q86UU1 1377 aa33.65■■■□□ 2.98
PACSIN3-209ENST00000532457 EHBP1L1Q8N3D4 1523 aa33.62■■■□□ 2.97
PACSIN3-209ENST00000532457 ABCC10Q5T3U5 1492 aa33.61■■■□□ 2.97
PACSIN3-209ENST00000532457 KCNH8Q96L42 1107 aa33.6■■■□□ 2.97
PACSIN3-209ENST00000532457 TRHP20396 242 aaPredicted RBP33.59■■■□□ 2.97
PACSIN3-209ENST00000532457 NCOA2Q15596 1464 aa33.56■■■□□ 2.96
PACSIN3-209ENST00000532457 TROQ12816 1431 aaPredicted RBP33.55■■■□□ 2.96
PACSIN3-209ENST00000532457 FAM69CQ0P6D2 419 aa33.55■■■□□ 2.96
PACSIN3-209ENST00000532457 DIP2BQ9P265 1576 aa33.54■■■□□ 2.96
PACSIN3-209ENST00000532457 RRBP1Q9P2E9 1410 aaKnown RBP33.53■■■□□ 2.96
PACSIN3-209ENST00000532457 SUPT6HQ7KZ85 1726 aaKnown RBP33.52■■■□□ 2.96
PACSIN3-209ENST00000532457 GLI2P10070 1586 aa33.49■■■□□ 2.95
PACSIN3-209ENST00000532457 KIF13AQ9H1H9 1805 aa33.46■■■□□ 2.95
PACSIN3-209ENST00000532457 CCNB3Q8WWL7 1395 aa33.45■■■□□ 2.95
PACSIN3-209ENST00000532457 KIF14Q15058 1648 aa33.44■■■□□ 2.94
PACSIN3-209ENST00000532457 MYOM3Q5VTT5 1437 aa33.39■■■□□ 2.94
PACSIN3-209ENST00000532457 ABCA9Q8IUA7 1624 aa33.38■■■□□ 2.93
PACSIN3-209ENST00000532457 FGD6Q6ZV73 1430 aa33.37■■■□□ 2.93
PACSIN3-209ENST00000532457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.36■■■□□ 2.93
PACSIN3-209ENST00000532457 CD109Q6YHK3 1445 aa33.35■■■□□ 2.93
PACSIN3-209ENST00000532457 MAP3K4Q9Y6R4 1608 aa33.34■■■□□ 2.93
PACSIN3-209ENST00000532457 FAM50AQ14320 339 aaKnown RBP33.32■■■□□ 2.93
PACSIN3-209ENST00000532457 TTC37Q6PGP7 1564 aa33.29■■■□□ 2.92
PACSIN3-209ENST00000532457 GPATCH8Q9UKJ3 1502 aaKnown RBP33.25■■■□□ 2.91
PACSIN3-209ENST00000532457 ITGAEP38570 1179 aa33.25■■■□□ 2.91
PACSIN3-209ENST00000532457 TSPOAP1O95153 1857 aa33.24■■■□□ 2.91
PACSIN3-209ENST00000532457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms