RNA–Protein interactions for RNA: ENST00000532419.5

TCN1-203, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-203ENST00000532419 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
TCN1-203ENST00000532419 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
TCN1-203ENST00000532419 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
TCN1-203ENST00000532419 C7P10643 843 aa11.74□□□□□ -0.53
TCN1-203ENST00000532419 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
TCN1-203ENST00000532419 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
TCN1-203ENST00000532419 POTEMA6NI47 508 aa11.68□□□□□ -0.54
TCN1-203ENST00000532419 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
TCN1-203ENST00000532419 FKBP8Q14318 412 aa11.66□□□□□ -0.54
TCN1-203ENST00000532419 MIER1Q8N108 512 aa11.66□□□□□ -0.54
TCN1-203ENST00000532419 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
TCN1-203ENST00000532419 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
TCN1-203ENST00000532419 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
TCN1-203ENST00000532419 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.55
TCN1-203ENST00000532419 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
TCN1-203ENST00000532419 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
TCN1-203ENST00000532419 MAP3K13O43283 966 aa11.59□□□□□ -0.55
TCN1-203ENST00000532419 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
TCN1-203ENST00000532419 SCUBE2Q9NQ36 999 aa11.58□□□□□ -0.56
TCN1-203ENST00000532419 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
TCN1-203ENST00000532419 TIE1P35590 1138 aa11.55□□□□□ -0.56
TCN1-203ENST00000532419 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
TCN1-203ENST00000532419 POTEFA5A3E0 1075 aa11.52□□□□□ -0.57
TCN1-203ENST00000532419 FAM163AQ96GL9 167 aaPredicted RBP11.51□□□□□ -0.57
TCN1-203ENST00000532419 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
TCN1-203ENST00000532419 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
TCN1-203ENST00000532419 SEC24BO95487 1268 aa11.48□□□□□ -0.57
TCN1-203ENST00000532419 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
TCN1-203ENST00000532419 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
TCN1-203ENST00000532419 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
TCN1-203ENST00000532419 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
TCN1-203ENST00000532419 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
TCN1-203ENST00000532419 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
TCN1-203ENST00000532419 NUBP1P53384 320 aa11.41□□□□□ -0.58
TCN1-203ENST00000532419 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
TCN1-203ENST00000532419 IER5LQ5T953 404 aa11.39□□□□□ -0.59
TCN1-203ENST00000532419 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
TCN1-203ENST00000532419 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
TCN1-203ENST00000532419 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
TCN1-203ENST00000532419 PLCG2P16885 1265 aa11.29□□□□□ -0.6
TCN1-203ENST00000532419 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
TCN1-203ENST00000532419 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
TCN1-203ENST00000532419 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
TCN1-203ENST00000532419 PYGBP11216 843 aa11.22□□□□□ -0.61
TCN1-203ENST00000532419 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
TCN1-203ENST00000532419 ST18O60284 1047 aa11.2□□□□□ -0.62
TCN1-203ENST00000532419 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
TCN1-203ENST00000532419 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
TCN1-203ENST00000532419 PCDHB8Q9UN66 801 aa11.17□□□□□ -0.62
TCN1-203ENST00000532419 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
TCN1-203ENST00000532419 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
TCN1-203ENST00000532419 SNPHO15079 494 aa11.08□□□□□ -0.64
TCN1-203ENST00000532419 GSE1Q14687 1217 aa11.06□□□□□ -0.64
TCN1-203ENST00000532419 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
TCN1-203ENST00000532419 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
TCN1-203ENST00000532419 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
TCN1-203ENST00000532419 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
TCN1-203ENST00000532419 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
TCN1-203ENST00000532419 PDCD7Q8N8D1 485 aaKnown RBP11.01□□□□□ -0.65
TCN1-203ENST00000532419 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
TCN1-203ENST00000532419 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
TCN1-203ENST00000532419 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
TCN1-203ENST00000532419 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
TCN1-203ENST00000532419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
TCN1-203ENST00000532419 PSEN1P49768 467 aa10.96□□□□□ -0.65
TCN1-203ENST00000532419 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
TCN1-203ENST00000532419 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
TCN1-203ENST00000532419 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
TCN1-203ENST00000532419 EMP3P54852 163 aa10.91□□□□□ -0.66
TCN1-203ENST00000532419 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
TCN1-203ENST00000532419 DPY19L2Q6NUT2 758 aa10.85□□□□□ -0.67
TCN1-203ENST00000532419 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
TCN1-203ENST00000532419 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
TCN1-203ENST00000532419 G3V3G9 751 aa10.84□□□□□ -0.67
TCN1-203ENST00000532419 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
TCN1-203ENST00000532419 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
TCN1-203ENST00000532419 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
TCN1-203ENST00000532419 ABCC9O60706 1549 aa10.83□□□□□ -0.68
TCN1-203ENST00000532419 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
TCN1-203ENST00000532419 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
TCN1-203ENST00000532419 BOLA1Q9Y3E2 137 aa10.8□□□□□ -0.68
TCN1-203ENST00000532419 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
TCN1-203ENST00000532419 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
TCN1-203ENST00000532419 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
TCN1-203ENST00000532419 HOXB3P14651 431 aaPredicted RBP10.73□□□□□ -0.69
TCN1-203ENST00000532419 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
TCN1-203ENST00000532419 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
TCN1-203ENST00000532419 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
TCN1-203ENST00000532419 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
TCN1-203ENST00000532419 ERBB3P21860 1342 aa10.66□□□□□ -0.7
TCN1-203ENST00000532419 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
TCN1-203ENST00000532419 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
TCN1-203ENST00000532419 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
TCN1-203ENST00000532419 MICALL2Q8IY33 904 aa10.58□□□□□ -0.72
TCN1-203ENST00000532419 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
TCN1-203ENST00000532419 SOX12O15370 315 aa10.55□□□□□ -0.72
TCN1-203ENST00000532419 PKD2Q13563 968 aa10.54□□□□□ -0.72
TCN1-203ENST00000532419 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
TCN1-203ENST00000532419 RIOK3O14730 519 aaKnown RBP10.53□□□□□ -0.72
TCN1-203ENST00000532419 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms