RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
TSPAN4-220ENST00000532375 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
TSPAN4-220ENST00000532375 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
TSPAN4-220ENST00000532375 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
TSPAN4-220ENST00000532375 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
TSPAN4-220ENST00000532375 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
TSPAN4-220ENST00000532375 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-220ENST00000532375 EEA1Q15075 1411 aa23.42■■□□□ 1.34
TSPAN4-220ENST00000532375 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
TSPAN4-220ENST00000532375 FAM9AQ8IZU1 332 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-220ENST00000532375 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
TSPAN4-220ENST00000532375 UGGT2Q9NYU1 1516 aa23.27■■□□□ 1.32
TSPAN4-220ENST00000532375 DISP1Q96F81 1524 aa23.25■■□□□ 1.31
TSPAN4-220ENST00000532375 KIF21BO75037 1637 aa23.21■■□□□ 1.31
TSPAN4-220ENST00000532375 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
TSPAN4-220ENST00000532375 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
TSPAN4-220ENST00000532375 PTPRGP23470 1445 aa23.15■■□□□ 1.3
TSPAN4-220ENST00000532375 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
TSPAN4-220ENST00000532375 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
TSPAN4-220ENST00000532375 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
TSPAN4-220ENST00000532375 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-220ENST00000532375 SAMD9Q5K651 1589 aa23.02■■□□□ 1.28
TSPAN4-220ENST00000532375 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
TSPAN4-220ENST00000532375 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
TSPAN4-220ENST00000532375 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
TSPAN4-220ENST00000532375 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-220ENST00000532375 P3H3Q8IVL6 736 aa22.96■■□□□ 1.27
TSPAN4-220ENST00000532375 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-220ENST00000532375 ABCC2Q92887 1545 aa22.95■■□□□ 1.26
TSPAN4-220ENST00000532375 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
TSPAN4-220ENST00000532375 ABCA8O94911 1581 aa22.93■■□□□ 1.26
TSPAN4-220ENST00000532375 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
TSPAN4-220ENST00000532375 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
TSPAN4-220ENST00000532375 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
TSPAN4-220ENST00000532375 KDM5BQ9UGL1 1544 aa22.9■■□□□ 1.26
TSPAN4-220ENST00000532375 EFCAB5A4FU69 1503 aa22.87■■□□□ 1.25
TSPAN4-220ENST00000532375 FHOD3Q2V2M9 1422 aa22.86■■□□□ 1.25
TSPAN4-220ENST00000532375 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
TSPAN4-220ENST00000532375 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
TSPAN4-220ENST00000532375 ARHGAP35Q9NRY4 1499 aa22.83■■□□□ 1.25
TSPAN4-220ENST00000532375 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-220ENST00000532375 ASXL2Q76L83 1435 aa22.8■■□□□ 1.24
TSPAN4-220ENST00000532375 DIP2BQ9P265 1576 aa22.79■■□□□ 1.24
TSPAN4-220ENST00000532375 RAPGEF6Q8TEU7 1601 aa22.76■■□□□ 1.23
TSPAN4-220ENST00000532375 ATP10BO94823 1461 aa22.75■■□□□ 1.23
TSPAN4-220ENST00000532375 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
TSPAN4-220ENST00000532375 NUP153P49790 1475 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-220ENST00000532375 GLI2P10070 1586 aa22.68■■□□□ 1.22
TSPAN4-220ENST00000532375 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
TSPAN4-220ENST00000532375 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-220ENST00000532375 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
TSPAN4-220ENST00000532375 WDR7Q9Y4E6 1490 aa22.66■■□□□ 1.22
TSPAN4-220ENST00000532375 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
TSPAN4-220ENST00000532375 CLIP1P30622 1438 aa22.64■■□□□ 1.21
TSPAN4-220ENST00000532375 TSPOAP1O95153 1857 aa22.58■■□□□ 1.21
TSPAN4-220ENST00000532375 PPRC1Q5VV67 1664 aaKnown RBP22.58■■□□□ 1.2
TSPAN4-220ENST00000532375 MAP3K4Q9Y6R4 1608 aa22.57■■□□□ 1.2
TSPAN4-220ENST00000532375 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
TSPAN4-220ENST00000532375 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
TSPAN4-220ENST00000532375 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-220ENST00000532375 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
TSPAN4-220ENST00000532375 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
TSPAN4-220ENST00000532375 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
TSPAN4-220ENST00000532375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-220ENST00000532375 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-220ENST00000532375 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
TSPAN4-220ENST00000532375 PCF11O94913 1555 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-220ENST00000532375 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
TSPAN4-220ENST00000532375 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-220ENST00000532375 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
TSPAN4-220ENST00000532375 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
TSPAN4-220ENST00000532375 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
TSPAN4-220ENST00000532375 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
TSPAN4-220ENST00000532375 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-220ENST00000532375 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
TSPAN4-220ENST00000532375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.38■■□□□ 1.17
TSPAN4-220ENST00000532375 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
TSPAN4-220ENST00000532375 KDM6BO15054 1643 aa22.36■■□□□ 1.17
TSPAN4-220ENST00000532375 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-220ENST00000532375 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-220ENST00000532375 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.17
TSPAN4-220ENST00000532375 KIF14Q15058 1648 aa22.31■■□□□ 1.16
TSPAN4-220ENST00000532375 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
TSPAN4-220ENST00000532375 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
TSPAN4-220ENST00000532375 NEO1Q92859 1461 aa22.26■■□□□ 1.15
TSPAN4-220ENST00000532375 PLCH2O75038 1416 aa22.25■■□□□ 1.15
TSPAN4-220ENST00000532375 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
TSPAN4-220ENST00000532375 FANCAO15360 1455 aa22.2■■□□□ 1.14
TSPAN4-220ENST00000532375 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
TSPAN4-220ENST00000532375 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
TSPAN4-220ENST00000532375 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
TSPAN4-220ENST00000532375 TIAM1Q13009 1591 aa22.15■■□□□ 1.14
TSPAN4-220ENST00000532375 RAPGEF3O95398 923 aa22.14■■□□□ 1.13
TSPAN4-220ENST00000532375 CDC42BPAQ5VT25 1732 aa22.14■■□□□ 1.13
TSPAN4-220ENST00000532375 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
TSPAN4-220ENST00000532375 CFAP74Q9C0B2 1584 aa22.13■■□□□ 1.13
TSPAN4-220ENST00000532375 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
TSPAN4-220ENST00000532375 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
TSPAN4-220ENST00000532375 MAP3K1Q13233 1512 aa22.12■■□□□ 1.13
TSPAN4-220ENST00000532375 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms