RNA–Protein interactions for RNA: ENST00000531690.5

GMDS-209, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-209ENST00000531690 ABCA5Q8WWZ7 1642 aa9.91□□□□□ -0.82
GMDS-209ENST00000531690 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
GMDS-209ENST00000531690 IGF1RP08069 1367 aa9.9□□□□□ -0.82
GMDS-209ENST00000531690 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.82
GMDS-209ENST00000531690 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
GMDS-209ENST00000531690 SLC4A1APQ9BWU0 796 aaKnown RBP9.89□□□□□ -0.83
GMDS-209ENST00000531690 EFCAB5A4FU69 1503 aa9.87□□□□□ -0.83
GMDS-209ENST00000531690 PBRM1Q86U86 1689 aa9.87□□□□□ -0.83
GMDS-209ENST00000531690 ARAP1Q96P48 1450 aa9.87□□□□□ -0.83
GMDS-209ENST00000531690 DNAJC5BQ9UF47 199 aa9.87□□□□□ -0.83
GMDS-209ENST00000531690 WDR62O43379 1518 aa9.87□□□□□ -0.83
GMDS-209ENST00000531690 ERCC6Q03468 1493 aa9.86□□□□□ -0.83
GMDS-209ENST00000531690 GAPVD1Q14C86 1478 aa9.86□□□□□ -0.83
GMDS-209ENST00000531690 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
GMDS-209ENST00000531690 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
GMDS-209ENST00000531690 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
GMDS-209ENST00000531690 IFT140Q96RY7 1462 aa9.84□□□□□ -0.83
GMDS-209ENST00000531690 ARHGAP35Q9NRY4 1499 aa9.84□□□□□ -0.83
GMDS-209ENST00000531690 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
GMDS-209ENST00000531690 TTBK1Q5TCY1 1321 aaPredicted RBP9.81□□□□□ -0.84
GMDS-209ENST00000531690 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
GMDS-209ENST00000531690 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
GMDS-209ENST00000531690 THOC2Q8NI27 1593 aaKnown RBP9.79□□□□□ -0.84
GMDS-209ENST00000531690 MAP3K1Q13233 1512 aa9.78□□□□□ -0.84
GMDS-209ENST00000531690 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
GMDS-209ENST00000531690 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.84
GMDS-209ENST00000531690 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
GMDS-209ENST00000531690 TIAM1Q13009 1591 aa9.75□□□□□ -0.85
GMDS-209ENST00000531690 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
GMDS-209ENST00000531690 FMN1Q68DA7 1419 aa9.75□□□□□ -0.85
GMDS-209ENST00000531690 FYCO1Q9BQS8 1478 aa9.75□□□□□ -0.85
GMDS-209ENST00000531690 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
GMDS-209ENST00000531690 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
GMDS-209ENST00000531690 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
GMDS-209ENST00000531690 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
GMDS-209ENST00000531690 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
GMDS-209ENST00000531690 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
GMDS-209ENST00000531690 MAGI1Q96QZ7 1491 aaPredicted RBP9.71□□□□□ -0.86
GMDS-209ENST00000531690 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
GMDS-209ENST00000531690 HECW1Q76N89 1606 aa9.67□□□□□ -0.86
GMDS-209ENST00000531690 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
GMDS-209ENST00000531690 LRRC9Q6ZRR7 1453 aa9.67□□□□□ -0.86
GMDS-209ENST00000531690 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
GMDS-209ENST00000531690 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
GMDS-209ENST00000531690 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
GMDS-209ENST00000531690 CCNB3Q8WWL7 1395 aa9.65□□□□□ -0.86
GMDS-209ENST00000531690 ATP1B4Q9UN42 357 aaPredicted RBP9.65□□□□□ -0.86
GMDS-209ENST00000531690 UGGT2Q9NYU1 1516 aa9.65□□□□□ -0.86
GMDS-209ENST00000531690 SYNJ2O15056 1496 aa9.65□□□□□ -0.87
GMDS-209ENST00000531690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.64□□□□□ -0.87
GMDS-209ENST00000531690 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
GMDS-209ENST00000531690 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
GMDS-209ENST00000531690 KIAA0586Q9BVV6 1533 aa9.63□□□□□ -0.87
GMDS-209ENST00000531690 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
GMDS-209ENST00000531690 POTEDQ86YR6 584 aa9.63□□□□□ -0.87
GMDS-209ENST00000531690 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
GMDS-209ENST00000531690 KIAA0556O60303 1618 aa9.62□□□□□ -0.87
GMDS-209ENST00000531690 SUPT6HQ7KZ85 1726 aaKnown RBP9.62□□□□□ -0.87
GMDS-209ENST00000531690 MTUS2Q5JR59 1369 aa9.61□□□□□ -0.87
GMDS-209ENST00000531690 DCAF8L1A6NGE4 600 aa9.6□□□□□ -0.87
GMDS-209ENST00000531690 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
GMDS-209ENST00000531690 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
GMDS-209ENST00000531690 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
GMDS-209ENST00000531690 CEP170Q5SW79 1584 aa9.57□□□□□ -0.88
GMDS-209ENST00000531690 RAPGEF6Q8TEU7 1601 aa9.56□□□□□ -0.88
GMDS-209ENST00000531690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.55□□□□□ -0.88
GMDS-209ENST00000531690 ZBTB22O15209 634 aa9.55□□□□□ -0.88
GMDS-209ENST00000531690 NUP160Q12769 1436 aa9.55□□□□□ -0.88
GMDS-209ENST00000531690 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
GMDS-209ENST00000531690 PHLDB1Q86UU1 1377 aa9.54□□□□□ -0.88
GMDS-209ENST00000531690 SLC4A2P04920 1241 aa9.54□□□□□ -0.88
GMDS-209ENST00000531690 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
GMDS-209ENST00000531690 DISP1Q96F81 1524 aa9.53□□□□□ -0.88
GMDS-209ENST00000531690 FBLN2P98095 1184 aa9.53□□□□□ -0.88
GMDS-209ENST00000531690 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
GMDS-209ENST00000531690 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
GMDS-209ENST00000531690 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.89
GMDS-209ENST00000531690 FGD6Q6ZV73 1430 aa9.52□□□□□ -0.89
GMDS-209ENST00000531690 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
GMDS-209ENST00000531690 CHD1O14646 1710 aa9.51□□□□□ -0.89
GMDS-209ENST00000531690 CDK11AQ9UQ88 783 aaPredicted RBP9.51□□□□□ -0.89
GMDS-209ENST00000531690 ITGAEP38570 1179 aa9.5□□□□□ -0.89
GMDS-209ENST00000531690 PTPN23Q9H3S7 1636 aa9.49□□□□□ -0.89
GMDS-209ENST00000531690 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
GMDS-209ENST00000531690 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
GMDS-209ENST00000531690 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
GMDS-209ENST00000531690 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
GMDS-209ENST00000531690 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
GMDS-209ENST00000531690 MIA2Q96PC5 1412 aa9.47□□□□□ -0.89
GMDS-209ENST00000531690 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
GMDS-209ENST00000531690 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.9
GMDS-209ENST00000531690 MAGI3Q5TCQ9 1506 aa9.46□□□□□ -0.9
GMDS-209ENST00000531690 TCOF1Q13428 1488 aaKnown RBP9.45□□□□□ -0.9
GMDS-209ENST00000531690 ADCY10Q96PN6 1610 aa9.45□□□□□ -0.9
GMDS-209ENST00000531690 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
GMDS-209ENST00000531690 GCC2Q8IWJ2 1684 aa9.43□□□□□ -0.9
GMDS-209ENST00000531690 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
GMDS-209ENST00000531690 KIF14Q15058 1648 aa9.43□□□□□ -0.9
GMDS-209ENST00000531690 ABCA8O94911 1581 aa9.43□□□□□ -0.9
GMDS-209ENST00000531690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.43□□□□□ -0.91e-6■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms