RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
LTBP3-218ENST00000530866 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
LTBP3-218ENST00000530866 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
LTBP3-218ENST00000530866 NESP48681 1621 aa17.93■□□□□ 0.46
LTBP3-218ENST00000530866 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
LTBP3-218ENST00000530866 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
LTBP3-218ENST00000530866 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
LTBP3-218ENST00000530866 CFTRP13569 1480 aa17.91■□□□□ 0.46
LTBP3-218ENST00000530866 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
LTBP3-218ENST00000530866 MTUS2Q5JR59 1369 aa17.89■□□□□ 0.45
LTBP3-218ENST00000530866 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
LTBP3-218ENST00000530866 FKBP8Q14318 412 aa17.86■□□□□ 0.45
LTBP3-218ENST00000530866 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
LTBP3-218ENST00000530866 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
LTBP3-218ENST00000530866 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
LTBP3-218ENST00000530866 FHOD3Q2V2M9 1422 aa17.84■□□□□ 0.45
LTBP3-218ENST00000530866 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
LTBP3-218ENST00000530866 IGF1RP08069 1367 aa17.83■□□□□ 0.44
LTBP3-218ENST00000530866 ANP32CO43423 234 aa17.82■□□□□ 0.44
LTBP3-218ENST00000530866 KIF21BO75037 1637 aa17.81■□□□□ 0.44
LTBP3-218ENST00000530866 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
LTBP3-218ENST00000530866 CUX1P39880 1505 aa17.8■□□□□ 0.44
LTBP3-218ENST00000530866 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
LTBP3-218ENST00000530866 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
LTBP3-218ENST00000530866 FOXD1Q16676 465 aa17.74■□□□□ 0.43
LTBP3-218ENST00000530866 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
LTBP3-218ENST00000530866 RAB3GAP2Q9H2M9 1393 aa17.73■□□□□ 0.43
LTBP3-218ENST00000530866 RTN4Q9NQC3 1192 aaKnown RBP17.72■□□□□ 0.43
LTBP3-218ENST00000530866 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
LTBP3-218ENST00000530866 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
LTBP3-218ENST00000530866 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
LTBP3-218ENST00000530866 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
LTBP3-218ENST00000530866 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
LTBP3-218ENST00000530866 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
LTBP3-218ENST00000530866 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
LTBP3-218ENST00000530866 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
LTBP3-218ENST00000530866 NBR1Q14596 966 aa17.64■□□□□ 0.42
LTBP3-218ENST00000530866 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-218ENST00000530866 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-218ENST00000530866 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
LTBP3-218ENST00000530866 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
LTBP3-218ENST00000530866 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
LTBP3-218ENST00000530866 FHAD1B1AJZ9 1412 aa17.58■□□□□ 0.41
LTBP3-218ENST00000530866 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
LTBP3-218ENST00000530866 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.41
LTBP3-218ENST00000530866 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.41
LTBP3-218ENST00000530866 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-218ENST00000530866 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
LTBP3-218ENST00000530866 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.42e-7■■■■□ 23.4
LTBP3-218ENST00000530866 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
LTBP3-218ENST00000530866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■□□□□ 10.2
LTBP3-218ENST00000530866 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
LTBP3-218ENST00000530866 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
LTBP3-218ENST00000530866 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
LTBP3-218ENST00000530866 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-218ENST00000530866 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.38
LTBP3-218ENST00000530866 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
LTBP3-218ENST00000530866 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
LTBP3-218ENST00000530866 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
LTBP3-218ENST00000530866 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
LTBP3-218ENST00000530866 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
LTBP3-218ENST00000530866 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
LTBP3-218ENST00000530866 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
LTBP3-218ENST00000530866 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LTBP3-218ENST00000530866 LRRC9Q6ZRR7 1453 aa17.41■□□□□ 0.38
LTBP3-218ENST00000530866 FMN1Q68DA7 1419 aa17.4■□□□□ 0.38
LTBP3-218ENST00000530866 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
LTBP3-218ENST00000530866 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.38
LTBP3-218ENST00000530866 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
LTBP3-218ENST00000530866 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
LTBP3-218ENST00000530866 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
LTBP3-218ENST00000530866 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
LTBP3-218ENST00000530866 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
LTBP3-218ENST00000530866 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
LTBP3-218ENST00000530866 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
LTBP3-218ENST00000530866 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
LTBP3-218ENST00000530866 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
LTBP3-218ENST00000530866 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.37
LTBP3-218ENST00000530866 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
LTBP3-218ENST00000530866 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
LTBP3-218ENST00000530866 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
LTBP3-218ENST00000530866 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
LTBP3-218ENST00000530866 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.36
LTBP3-218ENST00000530866 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.35
LTBP3-218ENST00000530866 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.35
LTBP3-218ENST00000530866 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
LTBP3-218ENST00000530866 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
LTBP3-218ENST00000530866 PKD2Q13563 968 aa17.25■□□□□ 0.35
LTBP3-218ENST00000530866 CARMIL2Q6F5E8 1435 aa17.25■□□□□ 0.35
LTBP3-218ENST00000530866 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
LTBP3-218ENST00000530866 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
LTBP3-218ENST00000530866 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
LTBP3-218ENST00000530866 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
LTBP3-218ENST00000530866 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
LTBP3-218ENST00000530866 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
LTBP3-218ENST00000530866 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
LTBP3-218ENST00000530866 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
LTBP3-218ENST00000530866 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
LTBP3-218ENST00000530866 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
LTBP3-218ENST00000530866 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms