RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 CTTNBP2Q8WZ74 1663 aa32.47■■■□□ 2.79
RDX-211ENST00000530749 PCF11O94913 1555 aaKnown RBP32.46■■■□□ 2.79
RDX-211ENST00000530749 ATP1B4Q9UN42 357 aaPredicted RBP32.45■■■□□ 2.78
RDX-211ENST00000530749 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
RDX-211ENST00000530749 CCNB3Q8WWL7 1395 aa32.4■■■□□ 2.78
RDX-211ENST00000530749 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
RDX-211ENST00000530749 ITGAEP38570 1179 aa32.39■■■□□ 2.78
RDX-211ENST00000530749 LRRC9Q6ZRR7 1453 aa32.37■■■□□ 2.77
RDX-211ENST00000530749 MAP3K1Q13233 1512 aa32.36■■■□□ 2.77
RDX-211ENST00000530749 EFCAB5A4FU69 1503 aa32.34■■■□□ 2.77
RDX-211ENST00000530749 CFAP43Q8NDM7 1665 aa32.3■■■□□ 2.76
RDX-211ENST00000530749 PHLDB1Q86UU1 1377 aa32.28■■■□□ 2.76
RDX-211ENST00000530749 DHX57Q6P158 1386 aaKnown RBP32.26■■■□□ 2.76
RDX-211ENST00000530749 AQRO60306 1485 aaKnown RBP eCLIP32.25■■■□□ 2.75
RDX-211ENST00000530749 MRC2Q9UBG0 1479 aa32.25■■■□□ 2.75
RDX-211ENST00000530749 DIEXFQ68CQ4 756 aaKnown RBP32.25■■■□□ 2.75
RDX-211ENST00000530749 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
RDX-211ENST00000530749 CASKIN1Q8WXD9 1431 aa32.21■■■□□ 2.75
RDX-211ENST00000530749 PBRM1Q86U86 1689 aa32.2■■■□□ 2.75
RDX-211ENST00000530749 ZNF316A6NFI3 1004 aaPredicted RBP32.17■■■□□ 2.74
RDX-211ENST00000530749 SAMD9Q5K651 1589 aa32.16■■■□□ 2.74
RDX-211ENST00000530749 SNAPC4Q5SXM2 1469 aa32.14■■■□□ 2.74
RDX-211ENST00000530749 FMN1Q68DA7 1419 aa32.14■■■□□ 2.74
RDX-211ENST00000530749 FAM50AQ14320 339 aaKnown RBP32.12■■■□□ 2.73
RDX-211ENST00000530749 ZNF608Q9ULD9 1512 aaPredicted RBP32.09■■■□□ 2.73
RDX-211ENST00000530749 LRRIQ1Q96JM4 1722 aa32.06■■■□□ 2.72
RDX-211ENST00000530749 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
RDX-211ENST00000530749 RAB3GAP2Q9H2M9 1393 aa32.04■■■□□ 2.72
RDX-211ENST00000530749 CLSPNQ9HAW4 1339 aa32.02■■■□□ 2.72
RDX-211ENST00000530749 WDR62O43379 1518 aa32.01■■■□□ 2.72
RDX-211ENST00000530749 GRIN2BQ13224 1484 aa32■■■□□ 2.71
RDX-211ENST00000530749 IFT140Q96RY7 1462 aa31.96■■■□□ 2.71
RDX-211ENST00000530749 MTUS2Q5JR59 1369 aa31.95■■■□□ 2.7
RDX-211ENST00000530749 IQGAP2Q13576 1575 aa31.93■■■□□ 2.7
RDX-211ENST00000530749 ERCC6Q03468 1493 aa31.93■■■□□ 2.7
RDX-211ENST00000530749 SETD5Q9C0A6 1442 aa31.91■■■□□ 2.7
RDX-211ENST00000530749 FGD6Q6ZV73 1430 aa31.84■■■□□ 2.69
RDX-211ENST00000530749 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
RDX-211ENST00000530749 MAPKBP1O60336 1514 aa31.83■■■□□ 2.69
RDX-211ENST00000530749 THOC2Q8NI27 1593 aaKnown RBP31.8■■■□□ 2.68
RDX-211ENST00000530749 MAGI3Q5TCQ9 1506 aa31.8■■■□□ 2.68
RDX-211ENST00000530749 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
RDX-211ENST00000530749 ARID3CA6NKF2 412 aa31.79■■■□□ 2.68
RDX-211ENST00000530749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.73■■■□□ 2.67
RDX-211ENST00000530749 EHBP1L1Q8N3D4 1523 aa31.73■■■□□ 2.67
RDX-211ENST00000530749 SUPT6HQ7KZ85 1726 aaKnown RBP31.73■■■□□ 2.67
RDX-211ENST00000530749 HECW1Q76N89 1606 aa31.71■■■□□ 2.67
RDX-211ENST00000530749 PTPRKQ15262 1439 aa31.7■■■□□ 2.66
RDX-211ENST00000530749 CDK13Q14004 1512 aaKnown RBP31.7■■■□□ 2.66
RDX-211ENST00000530749 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.66
RDX-211ENST00000530749 MYOM3Q5VTT5 1437 aa31.69■■■□□ 2.66
RDX-211ENST00000530749 GRIN2AQ12879 1464 aa31.69■■■□□ 2.66
RDX-211ENST00000530749 MIER1Q8N108 512 aa31.68■■■□□ 2.66
RDX-211ENST00000530749 CCDC18Q5T9S5 1454 aa31.67■■■□□ 2.66
RDX-211ENST00000530749 EPRSP07814 1512 aaKnown RBP31.67■■■□□ 2.66
RDX-211ENST00000530749 SCAF1Q9H7N4 1312 aaKnown RBP31.66■■■□□ 2.66
RDX-211ENST00000530749 KIAA0586Q9BVV6 1533 aa31.66■■■□□ 2.66
RDX-211ENST00000530749 SIN3AQ96ST3 1273 aa31.64■■■□□ 2.66
RDX-211ENST00000530749 DISP1Q96F81 1524 aa31.63■■■□□ 2.65
RDX-211ENST00000530749 NEUROD1Q13562 356 aa31.63■■■□□ 2.65
RDX-211ENST00000530749 FBLN2P98095 1184 aa31.61■■■□□ 2.65
RDX-211ENST00000530749 KIAA0556O60303 1618 aa31.6■■■□□ 2.65
RDX-211ENST00000530749 ARHGEF11O15085 1522 aa31.6■■■□□ 2.65
RDX-211ENST00000530749 PTPN23Q9H3S7 1636 aa31.58■■■□□ 2.65
RDX-211ENST00000530749 CHMP7Q8WUX9 453 aaPredicted RBP31.57■■■□□ 2.64
RDX-211ENST00000530749 ACIN1Q9UKV3 1341 aaKnown RBP31.55■■■□□ 2.64
RDX-211ENST00000530749 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
RDX-211ENST00000530749 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
RDX-211ENST00000530749 YTHDC1Q96MU7 727 aaKnown RBP31.51■■■□□ 2.63
RDX-211ENST00000530749 HFM1A2PYH4 1435 aa31.5■■■□□ 2.63
RDX-211ENST00000530749 SYNJ2O15056 1496 aa31.5■■■□□ 2.63
RDX-211ENST00000530749 NAIPQ13075 1403 aa31.46■■■□□ 2.63
RDX-211ENST00000530749 CHIC2Q9UKJ5 165 aa31.46■■■□□ 2.63
RDX-211ENST00000530749 NUP153P49790 1475 aaKnown RBP31.45■■■□□ 2.63
RDX-211ENST00000530749 RAPGEF6Q8TEU7 1601 aa31.42■■■□□ 2.62
RDX-211ENST00000530749 CENPBP07199 599 aaPredicted RBP31.42■■■□□ 2.62
RDX-211ENST00000530749 RRP7BPQ9NSQ0 103 aa31.42■■■□□ 2.62
RDX-211ENST00000530749 TCOF1Q13428 1488 aaKnown RBP31.4■■■□□ 2.62
RDX-211ENST00000530749 UACAQ9BZF9 1416 aa31.36■■■□□ 2.61
RDX-211ENST00000530749 PLB1Q6P1J6 1458 aa31.35■■■□□ 2.61
RDX-211ENST00000530749 NUP160Q12769 1436 aa31.32■■■□□ 2.6
RDX-211ENST00000530749 JPH4Q96JJ6 628 aa31.32■■■□□ 2.6
RDX-211ENST00000530749 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
RDX-211ENST00000530749 KDM6BO15054 1643 aa31.27■■■□□ 2.6
RDX-211ENST00000530749 ZNF644Q9H582 1327 aaPredicted RBP31.27■■■□□ 2.6
RDX-211ENST00000530749 PRG4Q92954 1404 aaPredicted RBP31.26■■■□□ 2.6
RDX-211ENST00000530749 GCC2Q8IWJ2 1684 aa31.24■■■□□ 2.59
RDX-211ENST00000530749 CARMIL2Q6F5E8 1435 aa31.22■■■□□ 2.59
RDX-211ENST00000530749 PPP1R15AO75807 674 aaPredicted RBP31.21■■■□□ 2.59
RDX-211ENST00000530749 CDK11AQ9UQ88 783 aaPredicted RBP31.2■■■□□ 2.59
RDX-211ENST00000530749 TIMELESSQ9UNS1 1208 aa31.19■■■□□ 2.58
RDX-211ENST00000530749 GTF3C3Q9Y5Q9 886 aa31.19■■■□□ 2.58
RDX-211ENST00000530749 HIRIP3Q9BW71 556 aaPredicted RBP31.18■■■□□ 2.58
RDX-211ENST00000530749 TRIM52Q96A61 297 aa31.17■■■□□ 2.58
RDX-211ENST00000530749 TONSLQ96HA7 1378 aa31.17■■■□□ 2.58
RDX-211ENST00000530749 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
RDX-211ENST00000530749 DAPK1P53355 1430 aa31.15■■■□□ 2.58
RDX-211ENST00000530749 KIF14Q15058 1648 aa31.14■■■□□ 2.58
RDX-211ENST00000530749 DENND4BO75064 1496 aaPredicted RBP31.14■■■□□ 2.58
RDX-211ENST00000530749 AKNAQ7Z591 1439 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms