RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 IGF1RP08069 1367 aa36.31■■■■□ 3.4
SMPD1-204ENST00000530395 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
SMPD1-204ENST00000530395 KIAA0586Q9BVV6 1533 aa36.19■■■■□ 3.38
SMPD1-204ENST00000530395 CARMIL1Q5VZK9 1371 aa36.11■■■■□ 3.37
SMPD1-204ENST00000530395 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
SMPD1-204ENST00000530395 ADCY10Q96PN6 1610 aa35.94■■■■□ 3.34
SMPD1-204ENST00000530395 NPM1P06748 294 aaKnown RBP eCLIP35.94■■■■□ 3.34
SMPD1-204ENST00000530395 IQGAP2Q13576 1575 aa35.92■■■■□ 3.34
SMPD1-204ENST00000530395 MAPKBP1O60336 1514 aa35.88■■■■□ 3.33
SMPD1-204ENST00000530395 CARMIL2Q6F5E8 1435 aa35.87■■■■□ 3.33
SMPD1-204ENST00000530395 RAPGEF2Q9Y4G8 1499 aa35.84■■■■□ 3.33
SMPD1-204ENST00000530395 PTPRGP23470 1445 aa35.81■■■■□ 3.32
SMPD1-204ENST00000530395 ABCC10Q5T3U5 1492 aa35.8■■■■□ 3.32
SMPD1-204ENST00000530395 TNIKQ9UKE5 1360 aa35.77■■■■□ 3.32
SMPD1-204ENST00000530395 DIP2BQ9P265 1576 aa35.75■■■■□ 3.31
SMPD1-204ENST00000530395 FAM69CQ0P6D2 419 aa35.72■■■■□ 3.31
SMPD1-204ENST00000530395 TTBK1Q5TCY1 1321 aaPredicted RBP35.71■■■■□ 3.31
SMPD1-204ENST00000530395 DISP1Q96F81 1524 aa35.67■■■■□ 3.3
SMPD1-204ENST00000530395 UGGT2Q9NYU1 1516 aa35.67■■■■□ 3.3
SMPD1-204ENST00000530395 CTTNBP2Q8WZ74 1663 aa35.64■■■■□ 3.3
SMPD1-204ENST00000530395 ABCC2Q92887 1545 aa35.62■■■■□ 3.29
SMPD1-204ENST00000530395 KIAA0556O60303 1618 aa35.58■■■■□ 3.29
SMPD1-204ENST00000530395 UHRF1BP1LA0JNW5 1464 aa35.58■■■■□ 3.29
SMPD1-204ENST00000530395 UACAQ9BZF9 1416 aa35.55■■■■□ 3.28
SMPD1-204ENST00000530395 TSPOAP1O95153 1857 aa35.52■■■■□ 3.28
SMPD1-204ENST00000530395 AEBP2Q6ZN18 517 aaPredicted RBP35.49■■■■□ 3.27
SMPD1-204ENST00000530395 PRXQ9BXM0 1461 aa35.48■■■■□ 3.27
SMPD1-204ENST00000530395 PLB1Q6P1J6 1458 aa35.48■■■■□ 3.27
SMPD1-204ENST00000530395 ASXL2Q76L83 1435 aa35.46■■■■□ 3.27
SMPD1-204ENST00000530395 GOLGA3Q08378 1498 aa35.43■■■■□ 3.26
SMPD1-204ENST00000530395 KDM6BO15054 1643 aa35.42■■■■□ 3.26
SMPD1-204ENST00000530395 KDM5BQ9UGL1 1544 aa35.41■■■■□ 3.26
SMPD1-204ENST00000530395 GLI2P10070 1586 aa35.38■■■■□ 3.25
SMPD1-204ENST00000530395 ZCCHC11Q5TAX3 1644 aaKnown RBP35.38■■■■□ 3.25
SMPD1-204ENST00000530395 PPRC1Q5VV67 1664 aaKnown RBP35.26■■■■□ 3.23
SMPD1-204ENST00000530395 EPRSP07814 1512 aaKnown RBP35.26■■■■□ 3.23
SMPD1-204ENST00000530395 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
SMPD1-204ENST00000530395 ABCA8O94911 1581 aa35.22■■■■□ 3.23
SMPD1-204ENST00000530395 EEA1Q15075 1411 aa35.21■■■■□ 3.23
SMPD1-204ENST00000530395 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
SMPD1-204ENST00000530395 WDR7Q9Y4E6 1490 aa35.17■■■■□ 3.22
SMPD1-204ENST00000530395 FAM9AQ8IZU1 332 aaPredicted RBP35.14■■■■□ 3.22
SMPD1-204ENST00000530395 TEX14Q8IWB6 1497 aa35.11■■■■□ 3.21
SMPD1-204ENST00000530395 SAMD9Q5K651 1589 aa35.08■■■■□ 3.21
SMPD1-204ENST00000530395 P3H3Q8IVL6 736 aa35.02■■■■□ 3.2
SMPD1-204ENST00000530395 CFAP43Q8NDM7 1665 aa35.01■■■■□ 3.2
SMPD1-204ENST00000530395 KCNH8Q96L42 1107 aa34.94■■■■□ 3.18
SMPD1-204ENST00000530395 KIF21BO75037 1637 aa34.93■■■■□ 3.18
SMPD1-204ENST00000530395 CD109Q6YHK3 1445 aa34.92■■■■□ 3.18
SMPD1-204ENST00000530395 RAPGEF6Q8TEU7 1601 aa34.92■■■■□ 3.18
SMPD1-204ENST00000530395 COL17A1Q9UMD9 1497 aaPredicted RBP34.91■■■■□ 3.18
SMPD1-204ENST00000530395 MAGI3Q5TCQ9 1506 aa34.91■■■■□ 3.18
SMPD1-204ENST00000530395 ATP10BO94823 1461 aa34.89■■■■□ 3.18
SMPD1-204ENST00000530395 ARID3CA6NKF2 412 aa34.86■■■■□ 3.17
SMPD1-204ENST00000530395 KDM4FA0A1W2PPD8 638 aa34.84■■■■□ 3.17
SMPD1-204ENST00000530395 RANGAP1P46060 587 aaPredicted RBP34.83■■■■□ 3.17
SMPD1-204ENST00000530395 EFCAB5A4FU69 1503 aa34.79■■■■□ 3.16
SMPD1-204ENST00000530395 FHOD3Q2V2M9 1422 aa34.79■■■■□ 3.16
SMPD1-204ENST00000530395 ABCA9Q8IUA7 1624 aa34.74■■■■□ 3.15
SMPD1-204ENST00000530395 NUP153P49790 1475 aaKnown RBP34.73■■■■□ 3.15
SMPD1-204ENST00000530395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.72■■■■□ 3.15
SMPD1-204ENST00000530395 HNRNPUL2Q1KMD3 747 aaKnown RBP34.72■■■■□ 3.15
SMPD1-204ENST00000530395 ADGRL1O94910 1474 aa34.71■■■■□ 3.15
SMPD1-204ENST00000530395 CHIC1Q5VXU3 224 aa34.7■■■■□ 3.15
SMPD1-204ENST00000530395 ARAP3Q8WWN8 1544 aa34.62■■■■□ 3.13
SMPD1-204ENST00000530395 UBTFP17480 764 aaKnown RBP34.59■■■■□ 3.13
SMPD1-204ENST00000530395 PHLDB1Q86UU1 1377 aa34.59■■■■□ 3.13
SMPD1-204ENST00000530395 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
SMPD1-204ENST00000530395 NEO1Q92859 1461 aa34.53■■■■□ 3.12
SMPD1-204ENST00000530395 PLEKHD1A6NEE1 506 aa34.53■■■■□ 3.12
SMPD1-204ENST00000530395 FMN1Q68DA7 1419 aa34.45■■■■□ 3.11
SMPD1-204ENST00000530395 HECW1Q76N89 1606 aa34.42■■■■□ 3.1
SMPD1-204ENST00000530395 ARHGAP35Q9NRY4 1499 aa34.42■■■■□ 3.1
SMPD1-204ENST00000530395 CFAP74Q9C0B2 1584 aa34.41■■■■□ 3.1
SMPD1-204ENST00000530395 CDK13Q14004 1512 aaKnown RBP34.41■■■■□ 3.1
SMPD1-204ENST00000530395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.4■■■■□ 3.1
SMPD1-204ENST00000530395 TTC37Q6PGP7 1564 aa34.36■■■■□ 3.09
SMPD1-204ENST00000530395 RAPGEF3O95398 923 aa34.36■■■■□ 3.09
SMPD1-204ENST00000530395 FRMPD1Q5SYB0 1578 aa34.35■■■■□ 3.09
SMPD1-204ENST00000530395 FANCAO15360 1455 aa34.33■■■■□ 3.09
SMPD1-204ENST00000530395 ATP1B4Q9UN42 357 aaPredicted RBP34.32■■■■□ 3.08
SMPD1-204ENST00000530395 AKNAQ7Z591 1439 aa34.29■■■■□ 3.08
SMPD1-204ENST00000530395 DENND4BO75064 1496 aaPredicted RBP34.27■■■■□ 3.08
SMPD1-204ENST00000530395 RICTORQ6R327 1708 aa34.27■■■■□ 3.08
SMPD1-204ENST00000530395 CDK11AQ9UQ88 783 aaPredicted RBP34.24■■■■□ 3.07
SMPD1-204ENST00000530395 ARHGEF40Q8TER5 1519 aa34.21■■■■□ 3.07
SMPD1-204ENST00000530395 MYO5CQ9NQX4 1742 aa34.19■■■■□ 3.06
SMPD1-204ENST00000530395 HECW2Q9P2P5 1572 aa34.19■■■■□ 3.06
SMPD1-204ENST00000530395 KIF14Q15058 1648 aa34.18■■■■□ 3.06
SMPD1-204ENST00000530395 PLCH2O75038 1416 aa34.17■■■■□ 3.06
SMPD1-204ENST00000530395 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
SMPD1-204ENST00000530395 ADAMTSL3P82987 1691 aa34.16■■■■□ 3.06
SMPD1-204ENST00000530395 ZMYM4Q5VZL5 1548 aa34.14■■■■□ 3.06
SMPD1-204ENST00000530395 BCORL1Q5H9F3 1711 aa34.14■■■■□ 3.06
SMPD1-204ENST00000530395 CLIP1P30622 1438 aa34.13■■■■□ 3.05
SMPD1-204ENST00000530395 TROQ12816 1431 aaPredicted RBP34.12■■■■□ 3.05
SMPD1-204ENST00000530395 ARID4BQ4LE39 1312 aaPredicted RBP34.11■■■■□ 3.05
SMPD1-204ENST00000530395 PCF11O94913 1555 aaKnown RBP34.1■■■■□ 3.05
SMPD1-204ENST00000530395 ZFYVE16Q7Z3T8 1539 aa34.08■■■■□ 3.05
SMPD1-204ENST00000530395 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms