RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
CDC27-206ENST00000528748 FBLN2P98095 1184 aa18.71■□□□□ 0.59
CDC27-206ENST00000528748 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
CDC27-206ENST00000528748 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
CDC27-206ENST00000528748 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
CDC27-206ENST00000528748 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
CDC27-206ENST00000528748 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
CDC27-206ENST00000528748 SOGA1O94964 1423 aa18.66■□□□□ 0.58
CDC27-206ENST00000528748 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
CDC27-206ENST00000528748 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
CDC27-206ENST00000528748 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
CDC27-206ENST00000528748 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
CDC27-206ENST00000528748 OSCARQ8IYS5 282 aa18.57■□□□□ 0.56
CDC27-206ENST00000528748 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
CDC27-206ENST00000528748 TDRD9Q8NDG6 1382 aaKnown RBP18.53■□□□□ 0.56
CDC27-206ENST00000528748 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
CDC27-206ENST00000528748 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
CDC27-206ENST00000528748 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDC27-206ENST00000528748 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
CDC27-206ENST00000528748 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
CDC27-206ENST00000528748 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
CDC27-206ENST00000528748 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
CDC27-206ENST00000528748 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
CDC27-206ENST00000528748 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
CDC27-206ENST00000528748 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
CDC27-206ENST00000528748 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
CDC27-206ENST00000528748 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
CDC27-206ENST00000528748 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
CDC27-206ENST00000528748 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
CDC27-206ENST00000528748 IGF1RP08069 1367 aa18.31■□□□□ 0.52
CDC27-206ENST00000528748 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
CDC27-206ENST00000528748 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
CDC27-206ENST00000528748 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
CDC27-206ENST00000528748 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
CDC27-206ENST00000528748 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
CDC27-206ENST00000528748 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
CDC27-206ENST00000528748 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
CDC27-206ENST00000528748 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
CDC27-206ENST00000528748 EEA1Q15075 1411 aa18.2■□□□□ 0.5
CDC27-206ENST00000528748 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
CDC27-206ENST00000528748 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
CDC27-206ENST00000528748 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
CDC27-206ENST00000528748 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
CDC27-206ENST00000528748 CHD1O14646 1710 aa18.16■□□□□ 0.5
CDC27-206ENST00000528748 CUL7Q14999 1698 aa18.15■□□□□ 0.5
CDC27-206ENST00000528748 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
CDC27-206ENST00000528748 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
CDC27-206ENST00000528748 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
CDC27-206ENST00000528748 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
CDC27-206ENST00000528748 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
CDC27-206ENST00000528748 NUP160Q12769 1436 aa18.04■□□□□ 0.48
CDC27-206ENST00000528748 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
CDC27-206ENST00000528748 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
CDC27-206ENST00000528748 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
CDC27-206ENST00000528748 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
CDC27-206ENST00000528748 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
CDC27-206ENST00000528748 KIF21BO75037 1637 aa17.96■□□□□ 0.47
CDC27-206ENST00000528748 KIAA0586Q9BVV6 1533 aa17.95■□□□□ 0.46
CDC27-206ENST00000528748 SPDYE1Q8NFV5 336 aaPredicted RBP17.95■□□□□ 0.46
CDC27-206ENST00000528748 POTEHQ6S545 545 aa17.94■□□□□ 0.46
CDC27-206ENST00000528748 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
CDC27-206ENST00000528748 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
CDC27-206ENST00000528748 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CDC27-206ENST00000528748 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
CDC27-206ENST00000528748 SHROOM2Q13796 1616 aa17.85■□□□□ 0.45
CDC27-206ENST00000528748 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
CDC27-206ENST00000528748 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
CDC27-206ENST00000528748 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
CDC27-206ENST00000528748 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
CDC27-206ENST00000528748 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
CDC27-206ENST00000528748 UGGT2Q9NYU1 1516 aa17.78■□□□□ 0.44
CDC27-206ENST00000528748 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
CDC27-206ENST00000528748 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
CDC27-206ENST00000528748 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
CDC27-206ENST00000528748 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
CDC27-206ENST00000528748 TNIKQ9UKE5 1360 aa17.76■□□□□ 0.43
CDC27-206ENST00000528748 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
CDC27-206ENST00000528748 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
CDC27-206ENST00000528748 DISP1Q96F81 1524 aa17.73■□□□□ 0.43
CDC27-206ENST00000528748 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDC27-206ENST00000528748 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
CDC27-206ENST00000528748 PIP4P2Q8N4L2 257 aa17.72■□□□□ 0.43
CDC27-206ENST00000528748 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
CDC27-206ENST00000528748 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
CDC27-206ENST00000528748 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
CDC27-206ENST00000528748 PTPRGP23470 1445 aa17.66■□□□□ 0.42
CDC27-206ENST00000528748 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
CDC27-206ENST00000528748 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
CDC27-206ENST00000528748 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
CDC27-206ENST00000528748 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
CDC27-206ENST00000528748 EFCAB5A4FU69 1503 aa17.62■□□□□ 0.41
CDC27-206ENST00000528748 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
CDC27-206ENST00000528748 FKBP8Q14318 412 aa17.6■□□□□ 0.41
CDC27-206ENST00000528748 CLIP1P30622 1438 aa17.59■□□□□ 0.41
CDC27-206ENST00000528748 PROM2Q8N271 834 aa17.59■□□□□ 0.41
CDC27-206ENST00000528748 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.41
CDC27-206ENST00000528748 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
CDC27-206ENST00000528748 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
CDC27-206ENST00000528748 PRKAR2AP13861 404 aaKnown RBP17.53■□□□□ 0.4
CDC27-206ENST00000528748 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms