RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
CCDC84-205ENST00000528088 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
CCDC84-205ENST00000528088 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
CCDC84-205ENST00000528088 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
CCDC84-205ENST00000528088 TOP2BQ02880 1626 aa18.83■□□□□ 0.6
CCDC84-205ENST00000528088 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
CCDC84-205ENST00000528088 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
CCDC84-205ENST00000528088 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
CCDC84-205ENST00000528088 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
CCDC84-205ENST00000528088 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.59
CCDC84-205ENST00000528088 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
CCDC84-205ENST00000528088 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
CCDC84-205ENST00000528088 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
CCDC84-205ENST00000528088 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
CCDC84-205ENST00000528088 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
CCDC84-205ENST00000528088 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
CCDC84-205ENST00000528088 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
CCDC84-205ENST00000528088 CEP170Q5SW79 1584 aa18.58■□□□□ 0.56
CCDC84-205ENST00000528088 NUP160Q12769 1436 aa18.58■□□□□ 0.56
CCDC84-205ENST00000528088 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
CCDC84-205ENST00000528088 IGF1RP08069 1367 aa18.51■□□□□ 0.55
CCDC84-205ENST00000528088 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
CCDC84-205ENST00000528088 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.54
CCDC84-205ENST00000528088 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
CCDC84-205ENST00000528088 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
CCDC84-205ENST00000528088 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
CCDC84-205ENST00000528088 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
CCDC84-205ENST00000528088 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
CCDC84-205ENST00000528088 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
CCDC84-205ENST00000528088 CUL7Q14999 1698 aa18.36■□□□□ 0.53
CCDC84-205ENST00000528088 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
CCDC84-205ENST00000528088 ATXN8OSP0DMR3 200 aa18.3■□□□□ 0.52
CCDC84-205ENST00000528088 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
CCDC84-205ENST00000528088 EEA1Q15075 1411 aa18.24■□□□□ 0.51
CCDC84-205ENST00000528088 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
CCDC84-205ENST00000528088 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
CCDC84-205ENST00000528088 IQGAP2Q13576 1575 aa18.14■□□□□ 0.5
CCDC84-205ENST00000528088 PTPRGP23470 1445 aa18.14■□□□□ 0.49
CCDC84-205ENST00000528088 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
CCDC84-205ENST00000528088 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
CCDC84-205ENST00000528088 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
CCDC84-205ENST00000528088 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC84-205ENST00000528088 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
CCDC84-205ENST00000528088 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
CCDC84-205ENST00000528088 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
CCDC84-205ENST00000528088 KIF21BO75037 1637 aa18.05■□□□□ 0.48
CCDC84-205ENST00000528088 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
CCDC84-205ENST00000528088 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
CCDC84-205ENST00000528088 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
CCDC84-205ENST00000528088 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
CCDC84-205ENST00000528088 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
CCDC84-205ENST00000528088 FKBP8Q14318 412 aa18.01■□□□□ 0.47
CCDC84-205ENST00000528088 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
CCDC84-205ENST00000528088 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
CCDC84-205ENST00000528088 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
CCDC84-205ENST00000528088 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
CCDC84-205ENST00000528088 ABCC2Q92887 1545 aa17.98■□□□□ 0.47
CCDC84-205ENST00000528088 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
CCDC84-205ENST00000528088 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
CCDC84-205ENST00000528088 DIP2BQ9P265 1576 aa17.97■□□□□ 0.47
CCDC84-205ENST00000528088 UHRF1BP1LA0JNW5 1464 aa17.96■□□□□ 0.47
CCDC84-205ENST00000528088 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
CCDC84-205ENST00000528088 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
CCDC84-205ENST00000528088 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
CCDC84-205ENST00000528088 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
CCDC84-205ENST00000528088 P3H3Q8IVL6 736 aa17.9■□□□□ 0.46
CCDC84-205ENST00000528088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.463e-7■■■■□ 25.9
CCDC84-205ENST00000528088 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.46
CCDC84-205ENST00000528088 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
CCDC84-205ENST00000528088 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
CCDC84-205ENST00000528088 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
CCDC84-205ENST00000528088 ABCA8O94911 1581 aa17.83■□□□□ 0.44
CCDC84-205ENST00000528088 EPRSP07814 1512 aaKnown RBP17.81■□□□□ 0.44
CCDC84-205ENST00000528088 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
CCDC84-205ENST00000528088 GLI2P10070 1586 aa17.8■□□□□ 0.44
CCDC84-205ENST00000528088 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
CCDC84-205ENST00000528088 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
CCDC84-205ENST00000528088 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
CCDC84-205ENST00000528088 PPRC1Q5VV67 1664 aaKnown RBP17.76■□□□□ 0.43
CCDC84-205ENST00000528088 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
CCDC84-205ENST00000528088 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
CCDC84-205ENST00000528088 KDM6BO15054 1643 aa17.74■□□□□ 0.43
CCDC84-205ENST00000528088 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
CCDC84-205ENST00000528088 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
CCDC84-205ENST00000528088 FHOD3Q2V2M9 1422 aa17.73■□□□□ 0.43
CCDC84-205ENST00000528088 ATP10BO94823 1461 aa17.72■□□□□ 0.43
CCDC84-205ENST00000528088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
CCDC84-205ENST00000528088 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
CCDC84-205ENST00000528088 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
CCDC84-205ENST00000528088 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
CCDC84-205ENST00000528088 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
CCDC84-205ENST00000528088 CLIP1P30622 1438 aa17.66■□□□□ 0.42
CCDC84-205ENST00000528088 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
CCDC84-205ENST00000528088 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
CCDC84-205ENST00000528088 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
CCDC84-205ENST00000528088 TEX14Q8IWB6 1497 aa17.63■□□□□ 0.41
CCDC84-205ENST00000528088 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
CCDC84-205ENST00000528088 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
CCDC84-205ENST00000528088 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
CCDC84-205ENST00000528088 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms