RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 ADAMTS12P58397 1594 aa25.16■■□□□ 1.62
LTBP3-209ENST00000527792 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
LTBP3-209ENST00000527792 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
LTBP3-209ENST00000527792 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
LTBP3-209ENST00000527792 KIF21BO75037 1637 aa25.06■■□□□ 1.6
LTBP3-209ENST00000527792 GRIN2AQ12879 1464 aa25.05■■□□□ 1.6
LTBP3-209ENST00000527792 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
LTBP3-209ENST00000527792 ERCC6L2Q5T890 1561 aa25■■□□□ 1.59
LTBP3-209ENST00000527792 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
LTBP3-209ENST00000527792 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
LTBP3-209ENST00000527792 NUP160Q12769 1436 aa24.98■■□□□ 1.59
LTBP3-209ENST00000527792 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
LTBP3-209ENST00000527792 JPH4Q96JJ6 628 aa24.88■■□□□ 1.57
LTBP3-209ENST00000527792 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
LTBP3-209ENST00000527792 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
LTBP3-209ENST00000527792 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
LTBP3-209ENST00000527792 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
LTBP3-209ENST00000527792 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
LTBP3-209ENST00000527792 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
LTBP3-209ENST00000527792 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
LTBP3-209ENST00000527792 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
LTBP3-209ENST00000527792 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
LTBP3-209ENST00000527792 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
LTBP3-209ENST00000527792 UGGT2Q9NYU1 1516 aa24.59■■□□□ 1.53
LTBP3-209ENST00000527792 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
LTBP3-209ENST00000527792 CLIP1P30622 1438 aa24.58■■□□□ 1.53
LTBP3-209ENST00000527792 KIF13AQ9H1H9 1805 aa24.57■■□□□ 1.52
LTBP3-209ENST00000527792 ABCC10Q5T3U5 1492 aa24.57■■□□□ 1.52
LTBP3-209ENST00000527792 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
LTBP3-209ENST00000527792 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
LTBP3-209ENST00000527792 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
LTBP3-209ENST00000527792 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
LTBP3-209ENST00000527792 DISP1Q96F81 1524 aa24.5■■□□□ 1.51
LTBP3-209ENST00000527792 SAMD9Q5K651 1589 aa24.5■■□□□ 1.51
LTBP3-209ENST00000527792 KIAA0556O60303 1618 aa24.5■■□□□ 1.51
LTBP3-209ENST00000527792 MAPKBP1O60336 1514 aa24.47■■□□□ 1.51
LTBP3-209ENST00000527792 ADCY10Q96PN6 1610 aa24.46■■□□□ 1.51
LTBP3-209ENST00000527792 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.51
LTBP3-209ENST00000527792 PTPRGP23470 1445 aa24.44■■□□□ 1.5
LTBP3-209ENST00000527792 DIP2BQ9P265 1576 aa24.41■■□□□ 1.5
LTBP3-209ENST00000527792 KDM4FA0A1W2PPD8 638 aa24.36■■□□□ 1.49
LTBP3-209ENST00000527792 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
LTBP3-209ENST00000527792 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
LTBP3-209ENST00000527792 KDM6BO15054 1643 aa24.28■■□□□ 1.48
LTBP3-209ENST00000527792 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
LTBP3-209ENST00000527792 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
LTBP3-209ENST00000527792 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
LTBP3-209ENST00000527792 ASXL2Q76L83 1435 aa24.23■■□□□ 1.47
LTBP3-209ENST00000527792 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
LTBP3-209ENST00000527792 RAPGEF6Q8TEU7 1601 aa24.2■■□□□ 1.46
LTBP3-209ENST00000527792 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.46
LTBP3-209ENST00000527792 UACAQ9BZF9 1416 aa24.19■■□□□ 1.46
LTBP3-209ENST00000527792 ABCA8O94911 1581 aa24.17■■□□□ 1.46
LTBP3-209ENST00000527792 UHRF1BP1LA0JNW5 1464 aa24.17■■□□□ 1.46
LTBP3-209ENST00000527792 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
LTBP3-209ENST00000527792 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
LTBP3-209ENST00000527792 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
LTBP3-209ENST00000527792 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
LTBP3-209ENST00000527792 APLP2Q06481 763 aa24.12■■□□□ 1.45
LTBP3-209ENST00000527792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.11■■□□□ 1.45
LTBP3-209ENST00000527792 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
LTBP3-209ENST00000527792 GLI2P10070 1586 aa24.11■■□□□ 1.45
LTBP3-209ENST00000527792 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
LTBP3-209ENST00000527792 KDM5BQ9UGL1 1544 aa24.06■■□□□ 1.44
LTBP3-209ENST00000527792 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
LTBP3-209ENST00000527792 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
LTBP3-209ENST00000527792 PPRC1Q5VV67 1664 aaKnown RBP24.03■■□□□ 1.44
LTBP3-209ENST00000527792 CCDC18Q5T9S5 1454 aa24.02■■□□□ 1.44
LTBP3-209ENST00000527792 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
LTBP3-209ENST00000527792 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
LTBP3-209ENST00000527792 ATP10BO94823 1461 aa24■■□□□ 1.43
LTBP3-209ENST00000527792 ZCCHC11Q5TAX3 1644 aaKnown RBP23.98■■□□□ 1.43
LTBP3-209ENST00000527792 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
LTBP3-209ENST00000527792 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
LTBP3-209ENST00000527792 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
LTBP3-209ENST00000527792 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
LTBP3-209ENST00000527792 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
LTBP3-209ENST00000527792 CFAP43Q8NDM7 1665 aa23.94■■□□□ 1.42
LTBP3-209ENST00000527792 MAP3K4Q9Y6R4 1608 aa23.93■■□□□ 1.42
LTBP3-209ENST00000527792 PLEKHD1A6NEE1 506 aa23.92■■□□□ 1.42
LTBP3-209ENST00000527792 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
LTBP3-209ENST00000527792 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
LTBP3-209ENST00000527792 ILDR1Q86SU0 546 aaPredicted RBP23.91■■□□□ 1.42
LTBP3-209ENST00000527792 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
LTBP3-209ENST00000527792 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
LTBP3-209ENST00000527792 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
LTBP3-209ENST00000527792 CD109Q6YHK3 1445 aa23.87■■□□□ 1.41
LTBP3-209ENST00000527792 LRRC9Q6ZRR7 1453 aa23.85■■□□□ 1.41
LTBP3-209ENST00000527792 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
LTBP3-209ENST00000527792 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-209ENST00000527792 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
LTBP3-209ENST00000527792 KIF14Q15058 1648 aa23.73■■□□□ 1.39
LTBP3-209ENST00000527792 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
LTBP3-209ENST00000527792 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
LTBP3-209ENST00000527792 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
LTBP3-209ENST00000527792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.64■■□□□ 1.38
LTBP3-209ENST00000527792 CCNB3Q8WWL7 1395 aa23.64■■□□□ 1.37
LTBP3-209ENST00000527792 ARAP3Q8WWN8 1544 aa23.62■■□□□ 1.37
LTBP3-209ENST00000527792 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
LTBP3-209ENST00000527792 RAPGEF3O95398 923 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms