RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ASTLQ6HA08 431 aaPredicted RBP10.45□□□□□ -0.74
CLNS1A-208ENST00000527265 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
CLNS1A-208ENST00000527265 SCUBE2Q9NQ36 999 aa10.43□□□□□ -0.74
CLNS1A-208ENST00000527265 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
CLNS1A-208ENST00000527265 MNX1P50219 401 aaPredicted RBP10.37□□□□□ -0.75
CLNS1A-208ENST00000527265 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
CLNS1A-208ENST00000527265 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
CLNS1A-208ENST00000527265 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
CLNS1A-208ENST00000527265 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
CLNS1A-208ENST00000527265 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
CLNS1A-208ENST00000527265 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
CLNS1A-208ENST00000527265 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
CLNS1A-208ENST00000527265 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
CLNS1A-208ENST00000527265 SEC24BO95487 1268 aa10.23□□□□□ -0.77
CLNS1A-208ENST00000527265 KIF12Q96FN5 646 aa10.22□□□□□ -0.77
CLNS1A-208ENST00000527265 TIE1P35590 1138 aa10.2□□□□□ -0.78
CLNS1A-208ENST00000527265 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
CLNS1A-208ENST00000527265 CDAN1Q8IWY9 1227 aa10.16□□□□□ -0.78
CLNS1A-208ENST00000527265 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
CLNS1A-208ENST00000527265 MAP3K13O43283 966 aa10.14□□□□□ -0.79
CLNS1A-208ENST00000527265 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
CLNS1A-208ENST00000527265 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
CLNS1A-208ENST00000527265 IER5LQ5T953 404 aa10.1□□□□□ -0.79
CLNS1A-208ENST00000527265 MIER1Q8N108 512 aa10.08□□□□□ -0.8
CLNS1A-208ENST00000527265 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
CLNS1A-208ENST00000527265 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
CLNS1A-208ENST00000527265 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
CLNS1A-208ENST00000527265 PROM2Q8N271 834 aa10.05□□□□□ -0.8
CLNS1A-208ENST00000527265 SGIP1Q9BQI5 828 aa10.05□□□□□ -0.8
CLNS1A-208ENST00000527265 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
CLNS1A-208ENST00000527265 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
CLNS1A-208ENST00000527265 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
CLNS1A-208ENST00000527265 ST18O60284 1047 aa10.01□□□□□ -0.81
CLNS1A-208ENST00000527265 PLCG2P16885 1265 aa10□□□□□ -0.81
CLNS1A-208ENST00000527265 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
CLNS1A-208ENST00000527265 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
CLNS1A-208ENST00000527265 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
CLNS1A-208ENST00000527265 SNPHO15079 494 aa9.95□□□□□ -0.82
CLNS1A-208ENST00000527265 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
CLNS1A-208ENST00000527265 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
CLNS1A-208ENST00000527265 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
CLNS1A-208ENST00000527265 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
CLNS1A-208ENST00000527265 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
CLNS1A-208ENST00000527265 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
CLNS1A-208ENST00000527265 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
CLNS1A-208ENST00000527265 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
CLNS1A-208ENST00000527265 NUBP1P53384 320 aa9.83□□□□□ -0.84
CLNS1A-208ENST00000527265 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
CLNS1A-208ENST00000527265 C3orf67Q6ZVT6 689 aa9.78□□□□□ -0.84
CLNS1A-208ENST00000527265 EMP3P54852 163 aa9.76□□□□□ -0.85
CLNS1A-208ENST00000527265 GOLGA2Q08379 1002 aa9.74□□□□□ -0.85
CLNS1A-208ENST00000527265 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
CLNS1A-208ENST00000527265 PYGBP11216 843 aa9.71□□□□□ -0.86
CLNS1A-208ENST00000527265 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
CLNS1A-208ENST00000527265 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
CLNS1A-208ENST00000527265 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
CLNS1A-208ENST00000527265 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
CLNS1A-208ENST00000527265 PCDHB8Q9UN66 801 aa9.66□□□□□ -0.86
CLNS1A-208ENST00000527265 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-208ENST00000527265 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
CLNS1A-208ENST00000527265 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
CLNS1A-208ENST00000527265 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
CLNS1A-208ENST00000527265 G3V3G9 751 aa9.6□□□□□ -0.87
CLNS1A-208ENST00000527265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.875e-9■■□□□ 14.1
CLNS1A-208ENST00000527265 GSE1Q14687 1217 aa9.56□□□□□ -0.88
CLNS1A-208ENST00000527265 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
CLNS1A-208ENST00000527265 POTEB3A0JP26 581 aa9.53□□□□□ -0.88
CLNS1A-208ENST00000527265 POTEBQ6S5H4 581 aa9.53□□□□□ -0.88
CLNS1A-208ENST00000527265 FBXO3Q9UK99 471 aa9.53□□□□□ -0.88
CLNS1A-208ENST00000527265 PSEN1P49768 467 aa9.5□□□□□ -0.89
CLNS1A-208ENST00000527265 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
CLNS1A-208ENST00000527265 RNF166Q96A37 237 aaPredicted RBP9.5□□□□□ -0.89
CLNS1A-208ENST00000527265 ERBB3P21860 1342 aa9.5□□□□□ -0.89
CLNS1A-208ENST00000527265 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
CLNS1A-208ENST00000527265 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
CLNS1A-208ENST00000527265 FKBP8Q14318 412 aa9.48□□□□□ -0.89
CLNS1A-208ENST00000527265 HOXB1P14653 301 aaPredicted RBP9.46□□□□□ -0.9
CLNS1A-208ENST00000527265 BOLA1Q9Y3E2 137 aa9.46□□□□□ -0.9
CLNS1A-208ENST00000527265 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
CLNS1A-208ENST00000527265 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
CLNS1A-208ENST00000527265 HOXB3P14651 431 aaPredicted RBP9.42□□□□□ -0.9
CLNS1A-208ENST00000527265 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
CLNS1A-208ENST00000527265 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
CLNS1A-208ENST00000527265 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
CLNS1A-208ENST00000527265 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
CLNS1A-208ENST00000527265 PTGER2P43116 358 aa9.38□□□□□ -0.91
CLNS1A-208ENST00000527265 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
CLNS1A-208ENST00000527265 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
CLNS1A-208ENST00000527265 ZSWIM6Q9HCJ5 1215 aa9.33□□□□□ -0.92
CLNS1A-208ENST00000527265 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
CLNS1A-208ENST00000527265 CIZ1Q9ULV3 898 aaPredicted RBP9.28□□□□□ -0.92
CLNS1A-208ENST00000527265 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
CLNS1A-208ENST00000527265 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
CLNS1A-208ENST00000527265 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
CLNS1A-208ENST00000527265 GPR153Q6NV75 609 aa9.2□□□□□ -0.94
CLNS1A-208ENST00000527265 EFCAB3Q8N7B9 438 aa9.2□□□□□ -0.94
CLNS1A-208ENST00000527265 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLNS1A-208ENST00000527265 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
CLNS1A-208ENST00000527265 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
CLNS1A-208ENST00000527265 ARSIQ5FYB1 569 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms