RNA–Protein interactions for RNA: ENST00000526927.5

LTBP3-207, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-207ENST00000526927 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
LTBP3-207ENST00000526927 CUL7Q14999 1698 aa26.52■■□□□ 1.84
LTBP3-207ENST00000526927 FHOD3Q2V2M9 1422 aa26.52■■□□□ 1.84
LTBP3-207ENST00000526927 WDR62O43379 1518 aa26.42■■□□□ 1.82
LTBP3-207ENST00000526927 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
LTBP3-207ENST00000526927 CTTNBP2Q8WZ74 1663 aa26.41■■□□□ 1.82
LTBP3-207ENST00000526927 ITGAEP38570 1179 aa26.34■■□□□ 1.81
LTBP3-207ENST00000526927 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
LTBP3-207ENST00000526927 PCF11O94913 1555 aaKnown RBP26.33■■□□□ 1.81
LTBP3-207ENST00000526927 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
LTBP3-207ENST00000526927 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
LTBP3-207ENST00000526927 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
LTBP3-207ENST00000526927 FBLN2P98095 1184 aa26.29■■□□□ 1.8
LTBP3-207ENST00000526927 FHAD1B1AJZ9 1412 aa26.28■■□□□ 1.8
LTBP3-207ENST00000526927 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
LTBP3-207ENST00000526927 ARID3CA6NKF2 412 aa26.26■■□□□ 1.79
LTBP3-207ENST00000526927 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
LTBP3-207ENST00000526927 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
LTBP3-207ENST00000526927 TIAM1Q13009 1591 aa26.25■■□□□ 1.79
LTBP3-207ENST00000526927 EFCAB5A4FU69 1503 aa26.19■■□□□ 1.78
LTBP3-207ENST00000526927 SCAF1Q9H7N4 1312 aaKnown RBP26.17■■□□□ 1.78
LTBP3-207ENST00000526927 LRRC9Q6ZRR7 1453 aa26.16■■□□□ 1.78
LTBP3-207ENST00000526927 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
LTBP3-207ENST00000526927 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
LTBP3-207ENST00000526927 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
LTBP3-207ENST00000526927 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
LTBP3-207ENST00000526927 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
LTBP3-207ENST00000526927 CCNB3Q8WWL7 1395 aa26.1■■□□□ 1.77
LTBP3-207ENST00000526927 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
LTBP3-207ENST00000526927 FAM50AQ14320 339 aaKnown RBP26.1■■□□□ 1.77
LTBP3-207ENST00000526927 FMN1Q68DA7 1419 aa26.09■■□□□ 1.77
LTBP3-207ENST00000526927 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
LTBP3-207ENST00000526927 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
LTBP3-207ENST00000526927 LRRIQ1Q96JM4 1722 aa26.06■■□□□ 1.76
LTBP3-207ENST00000526927 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
LTBP3-207ENST00000526927 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
LTBP3-207ENST00000526927 MAP3K1Q13233 1512 aa26.01■■□□□ 1.75
LTBP3-207ENST00000526927 MTUS2Q5JR59 1369 aa25.98■■□□□ 1.75
LTBP3-207ENST00000526927 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
LTBP3-207ENST00000526927 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
LTBP3-207ENST00000526927 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
LTBP3-207ENST00000526927 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
LTBP3-207ENST00000526927 CDK13Q14004 1512 aaKnown RBP25.9■■□□□ 1.74
LTBP3-207ENST00000526927 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
LTBP3-207ENST00000526927 MAGI3Q5TCQ9 1506 aa25.88■■□□□ 1.73
LTBP3-207ENST00000526927 UGGT2Q9NYU1 1516 aa25.87■■□□□ 1.73
LTBP3-207ENST00000526927 KIAA0556O60303 1618 aa25.83■■□□□ 1.73
LTBP3-207ENST00000526927 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.72
LTBP3-207ENST00000526927 JPH4Q96JJ6 628 aa25.83■■□□□ 1.72
LTBP3-207ENST00000526927 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
LTBP3-207ENST00000526927 EPRSP07814 1512 aaKnown RBP25.79■■□□□ 1.72
LTBP3-207ENST00000526927 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
LTBP3-207ENST00000526927 FGD6Q6ZV73 1430 aa25.76■■□□□ 1.71
LTBP3-207ENST00000526927 HECW1Q76N89 1606 aa25.75■■□□□ 1.71
LTBP3-207ENST00000526927 PLB1Q6P1J6 1458 aa25.74■■□□□ 1.71
LTBP3-207ENST00000526927 NUP160Q12769 1436 aa25.73■■□□□ 1.71
LTBP3-207ENST00000526927 NUP153P49790 1475 aaKnown RBP25.69■■□□□ 1.7
LTBP3-207ENST00000526927 SUPT6HQ7KZ85 1726 aaKnown RBP25.69■■□□□ 1.7
LTBP3-207ENST00000526927 EHBP1L1Q8N3D4 1523 aa25.68■■□□□ 1.7
LTBP3-207ENST00000526927 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
LTBP3-207ENST00000526927 CCDC18Q5T9S5 1454 aa25.68■■□□□ 1.7
LTBP3-207ENST00000526927 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
LTBP3-207ENST00000526927 MYOM3Q5VTT5 1437 aa25.66■■□□□ 1.7
LTBP3-207ENST00000526927 SETD5Q9C0A6 1442 aa25.66■■□□□ 1.7
LTBP3-207ENST00000526927 CHD1O14646 1710 aa25.65■■□□□ 1.7
LTBP3-207ENST00000526927 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.69
LTBP3-207ENST00000526927 CARMIL2Q6F5E8 1435 aa25.6■■□□□ 1.69
LTBP3-207ENST00000526927 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
LTBP3-207ENST00000526927 ZNF644Q9H582 1327 aaPredicted RBP25.59■■□□□ 1.69
LTBP3-207ENST00000526927 RRP7BPQ9NSQ0 103 aa25.58■■□□□ 1.69
LTBP3-207ENST00000526927 PTPN23Q9H3S7 1636 aa25.56■■□□□ 1.68
LTBP3-207ENST00000526927 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
LTBP3-207ENST00000526927 SIN3AQ96ST3 1273 aa25.55■■□□□ 1.68
LTBP3-207ENST00000526927 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
LTBP3-207ENST00000526927 MAPKBP1O60336 1514 aa25.5■■□□□ 1.67
LTBP3-207ENST00000526927 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
LTBP3-207ENST00000526927 ZNF316A6NFI3 1004 aaPredicted RBP25.49■■□□□ 1.67
LTBP3-207ENST00000526927 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
LTBP3-207ENST00000526927 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
LTBP3-207ENST00000526927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.48■■□□□ 1.67
LTBP3-207ENST00000526927 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
LTBP3-207ENST00000526927 ACIN1Q9UKV3 1341 aaKnown RBP25.45■■□□□ 1.66
LTBP3-207ENST00000526927 PTPRGP23470 1445 aa25.44■■□□□ 1.66
LTBP3-207ENST00000526927 KIF14Q15058 1648 aa25.44■■□□□ 1.66
LTBP3-207ENST00000526927 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
LTBP3-207ENST00000526927 NAIPQ13075 1403 aa25.4■■□□□ 1.66
LTBP3-207ENST00000526927 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
LTBP3-207ENST00000526927 ATP10BO94823 1461 aa25.39■■□□□ 1.66
LTBP3-207ENST00000526927 ABCA8O94911 1581 aa25.38■■□□□ 1.65
LTBP3-207ENST00000526927 HFM1A2PYH4 1435 aa25.37■■□□□ 1.65
LTBP3-207ENST00000526927 PLEKHD1A6NEE1 506 aa25.36■■□□□ 1.65
LTBP3-207ENST00000526927 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
LTBP3-207ENST00000526927 TCOF1Q13428 1488 aaKnown RBP25.35■■□□□ 1.65
LTBP3-207ENST00000526927 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
LTBP3-207ENST00000526927 KDM6BO15054 1643 aa25.35■■□□□ 1.65
LTBP3-207ENST00000526927 TRIM52Q96A61 297 aa25.33■■□□□ 1.65
LTBP3-207ENST00000526927 MIA2Q96PC5 1412 aa25.32■■□□□ 1.64
LTBP3-207ENST00000526927 GPATCH8Q9UKJ3 1502 aaKnown RBP25.28■■□□□ 1.64
LTBP3-207ENST00000526927 FOXD1Q16676 465 aa25.27■■□□□ 1.64
LTBP3-207ENST00000526927 ABCC5O15440 1437 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms