RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 RAPGEF2Q9Y4G8 1499 aa27.21■■□□□ 1.95
SSSCA1-202ENST00000526433 SHROOM2Q13796 1616 aa27.21■■□□□ 1.95
SSSCA1-202ENST00000526433 KIAA0586Q9BVV6 1533 aa27.2■■□□□ 1.94
SSSCA1-202ENST00000526433 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
SSSCA1-202ENST00000526433 CSRNP3Q8WYN3 585 aa27.17■■□□□ 1.94
SSSCA1-202ENST00000526433 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
SSSCA1-202ENST00000526433 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
SSSCA1-202ENST00000526433 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-202ENST00000526433 EEA1Q15075 1411 aa27.09■■□□□ 1.93
SSSCA1-202ENST00000526433 IQGAP2Q13576 1575 aa27.01■■□□□ 1.91
SSSCA1-202ENST00000526433 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
SSSCA1-202ENST00000526433 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
SSSCA1-202ENST00000526433 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
SSSCA1-202ENST00000526433 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
SSSCA1-202ENST00000526433 DISP1Q96F81 1524 aa26.85■■□□□ 1.89
SSSCA1-202ENST00000526433 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
SSSCA1-202ENST00000526433 PTPRGP23470 1445 aa26.84■■□□□ 1.89
SSSCA1-202ENST00000526433 KIF21BO75037 1637 aa26.79■■□□□ 1.88
SSSCA1-202ENST00000526433 TRHP20396 242 aaPredicted RBP26.78■■□□□ 1.88
SSSCA1-202ENST00000526433 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
SSSCA1-202ENST00000526433 KIAA0556O60303 1618 aa26.74■■□□□ 1.87
SSSCA1-202ENST00000526433 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
SSSCA1-202ENST00000526433 NPM1P06748 294 aaKnown RBP eCLIP26.73■■□□□ 1.87
SSSCA1-202ENST00000526433 UBTFP17480 764 aaKnown RBP26.7■■□□□ 1.86
SSSCA1-202ENST00000526433 ADCY10Q96PN6 1610 aa26.69■■□□□ 1.86
SSSCA1-202ENST00000526433 P3H3Q8IVL6 736 aa26.67■■□□□ 1.86
SSSCA1-202ENST00000526433 RANGAP1P46060 587 aaPredicted RBP26.66■■□□□ 1.86
SSSCA1-202ENST00000526433 UACAQ9BZF9 1416 aa26.64■■□□□ 1.85
SSSCA1-202ENST00000526433 UHRF1BP1LA0JNW5 1464 aa26.59■■□□□ 1.85
SSSCA1-202ENST00000526433 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
SSSCA1-202ENST00000526433 ABCC2Q92887 1545 aa26.55■■□□□ 1.84
SSSCA1-202ENST00000526433 PLB1Q6P1J6 1458 aa26.53■■□□□ 1.84
SSSCA1-202ENST00000526433 MAPKBP1O60336 1514 aa26.51■■□□□ 1.83
SSSCA1-202ENST00000526433 ABCA8O94911 1581 aa26.47■■□□□ 1.83
SSSCA1-202ENST00000526433 KDM5BQ9UGL1 1544 aa26.46■■□□□ 1.83
SSSCA1-202ENST00000526433 FAM69CQ0P6D2 419 aa26.45■■□□□ 1.82
SSSCA1-202ENST00000526433 FHOD3Q2V2M9 1422 aa26.45■■□□□ 1.82
SSSCA1-202ENST00000526433 EFCAB5A4FU69 1503 aa26.44■■□□□ 1.82
SSSCA1-202ENST00000526433 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
SSSCA1-202ENST00000526433 KIF13AQ9H1H9 1805 aa26.42■■□□□ 1.82
SSSCA1-202ENST00000526433 ASXL2Q76L83 1435 aa26.4■■□□□ 1.82
SSSCA1-202ENST00000526433 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.82
SSSCA1-202ENST00000526433 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
SSSCA1-202ENST00000526433 DIP2BQ9P265 1576 aa26.35■■□□□ 1.81
SSSCA1-202ENST00000526433 ARHGAP35Q9NRY4 1499 aa26.35■■□□□ 1.81
SSSCA1-202ENST00000526433 RAPGEF6Q8TEU7 1601 aa26.33■■□□□ 1.81
SSSCA1-202ENST00000526433 ATP10BO94823 1461 aa26.31■■□□□ 1.8
SSSCA1-202ENST00000526433 LOC105371045A0A1W2PR82 267 aa26.25■■□□□ 1.79
SSSCA1-202ENST00000526433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
SSSCA1-202ENST00000526433 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
SSSCA1-202ENST00000526433 KCNH8Q96L42 1107 aa26.25■■□□□ 1.79
SSSCA1-202ENST00000526433 EPRSP07814 1512 aaKnown RBP26.24■■□□□ 1.79
SSSCA1-202ENST00000526433 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
SSSCA1-202ENST00000526433 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
SSSCA1-202ENST00000526433 FMN1Q68DA7 1419 aa26.23■■□□□ 1.79
SSSCA1-202ENST00000526433 GLI2P10070 1586 aa26.23■■□□□ 1.79
SSSCA1-202ENST00000526433 TSPOAP1O95153 1857 aa26.2■■□□□ 1.78
SSSCA1-202ENST00000526433 ATP1B4Q9UN42 357 aaPredicted RBP26.2■■□□□ 1.78
SSSCA1-202ENST00000526433 CLIP1P30622 1438 aa26.2■■□□□ 1.78
SSSCA1-202ENST00000526433 PLEKHD1A6NEE1 506 aa26.13■■□□□ 1.77
SSSCA1-202ENST00000526433 MAP3K4Q9Y6R4 1608 aa26.09■■□□□ 1.77
SSSCA1-202ENST00000526433 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
SSSCA1-202ENST00000526433 CEP162Q5TB80 1403 aa26.06■■□□□ 1.76
SSSCA1-202ENST00000526433 CDK13Q14004 1512 aaKnown RBP26.06■■□□□ 1.76
SSSCA1-202ENST00000526433 PPRC1Q5VV67 1664 aaKnown RBP26.06■■□□□ 1.76
SSSCA1-202ENST00000526433 CD109Q6YHK3 1445 aa26.05■■□□□ 1.76
SSSCA1-202ENST00000526433 CASKIN1Q8WXD9 1431 aa26.04■■□□□ 1.76
SSSCA1-202ENST00000526433 CFAP43Q8NDM7 1665 aa26.03■■□□□ 1.76
SSSCA1-202ENST00000526433 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
SSSCA1-202ENST00000526433 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
SSSCA1-202ENST00000526433 PCF11O94913 1555 aaKnown RBP25.98■■□□□ 1.75
SSSCA1-202ENST00000526433 MAGI3Q5TCQ9 1506 aa25.97■■□□□ 1.75
SSSCA1-202ENST00000526433 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
SSSCA1-202ENST00000526433 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
SSSCA1-202ENST00000526433 KDM6BO15054 1643 aa25.94■■□□□ 1.74
SSSCA1-202ENST00000526433 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
SSSCA1-202ENST00000526433 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
SSSCA1-202ENST00000526433 COL17A1Q9UMD9 1497 aaPredicted RBP25.87■■□□□ 1.73
SSSCA1-202ENST00000526433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.87■■□□□ 1.73
SSSCA1-202ENST00000526433 TROQ12816 1431 aaPredicted RBP25.87■■□□□ 1.73
SSSCA1-202ENST00000526433 TTC37Q6PGP7 1564 aa25.81■■□□□ 1.72
SSSCA1-202ENST00000526433 PHLDB1Q86UU1 1377 aa25.8■■□□□ 1.72
SSSCA1-202ENST00000526433 KIF14Q15058 1648 aa25.78■■□□□ 1.72
SSSCA1-202ENST00000526433 NEO1Q92859 1461 aa25.77■■□□□ 1.72
SSSCA1-202ENST00000526433 ARAP3Q8WWN8 1544 aa25.75■■□□□ 1.71
SSSCA1-202ENST00000526433 PLCH2O75038 1416 aa25.75■■□□□ 1.71
SSSCA1-202ENST00000526433 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
SSSCA1-202ENST00000526433 FANCAO15360 1455 aa25.72■■□□□ 1.71
SSSCA1-202ENST00000526433 AKNAQ7Z591 1439 aa25.71■■□□□ 1.71
SSSCA1-202ENST00000526433 EFCAB2Q5VUJ9 269 aa25.7■■□□□ 1.7
SSSCA1-202ENST00000526433 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
SSSCA1-202ENST00000526433 MYO5CQ9NQX4 1742 aa25.68■■□□□ 1.7
SSSCA1-202ENST00000526433 RAPGEF3O95398 923 aa25.68■■□□□ 1.7
SSSCA1-202ENST00000526433 CFAP74Q9C0B2 1584 aa25.65■■□□□ 1.7
SSSCA1-202ENST00000526433 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
SSSCA1-202ENST00000526433 ARHGAP5Q13017 1502 aa25.61■■□□□ 1.69
SSSCA1-202ENST00000526433 CDC42BPBQ9Y5S2 1711 aa25.6■■□□□ 1.69
SSSCA1-202ENST00000526433 TIAM1Q13009 1591 aa25.58■■□□□ 1.69
SSSCA1-202ENST00000526433 SCAPERQ9BY12 1400 aa25.58■■□□□ 1.69
SSSCA1-202ENST00000526433 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms