RNA–Protein interactions for RNA: ENST00000525751.5

PABPC4-221, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 4

Gene PABPC4, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-221ENST00000525751 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
PABPC4-221ENST00000525751 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
PABPC4-221ENST00000525751 NUP160Q12769 1436 aa13.35□□□□□ -0.27
PABPC4-221ENST00000525751 FBLN2P98095 1184 aa13.34□□□□□ -0.27
PABPC4-221ENST00000525751 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
PABPC4-221ENST00000525751 CHD1O14646 1710 aa13.32□□□□□ -0.28
PABPC4-221ENST00000525751 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
PABPC4-221ENST00000525751 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
PABPC4-221ENST00000525751 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
PABPC4-221ENST00000525751 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
PABPC4-221ENST00000525751 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
PABPC4-221ENST00000525751 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
PABPC4-221ENST00000525751 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
PABPC4-221ENST00000525751 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
PABPC4-221ENST00000525751 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
PABPC4-221ENST00000525751 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
PABPC4-221ENST00000525751 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
PABPC4-221ENST00000525751 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
PABPC4-221ENST00000525751 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
PABPC4-221ENST00000525751 CLIP1P30622 1438 aa13.19□□□□□ -0.3
PABPC4-221ENST00000525751 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
PABPC4-221ENST00000525751 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
PABPC4-221ENST00000525751 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
PABPC4-221ENST00000525751 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
PABPC4-221ENST00000525751 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
PABPC4-221ENST00000525751 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-221ENST00000525751 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
PABPC4-221ENST00000525751 RANGAP1P46060 587 aaPredicted RBP13.11□□□□□ -0.31
PABPC4-221ENST00000525751 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
PABPC4-221ENST00000525751 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
PABPC4-221ENST00000525751 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PABPC4-221ENST00000525751 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
PABPC4-221ENST00000525751 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
PABPC4-221ENST00000525751 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
PABPC4-221ENST00000525751 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
PABPC4-221ENST00000525751 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
PABPC4-221ENST00000525751 PTPRGP23470 1445 aa13.02□□□□□ -0.33
PABPC4-221ENST00000525751 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
PABPC4-221ENST00000525751 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
PABPC4-221ENST00000525751 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
PABPC4-221ENST00000525751 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
PABPC4-221ENST00000525751 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
PABPC4-221ENST00000525751 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
PABPC4-221ENST00000525751 ABCA8O94911 1581 aa12.97□□□□□ -0.33
PABPC4-221ENST00000525751 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
PABPC4-221ENST00000525751 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
PABPC4-221ENST00000525751 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
PABPC4-221ENST00000525751 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
PABPC4-221ENST00000525751 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
PABPC4-221ENST00000525751 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
PABPC4-221ENST00000525751 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
PABPC4-221ENST00000525751 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
PABPC4-221ENST00000525751 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
PABPC4-221ENST00000525751 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
PABPC4-221ENST00000525751 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
PABPC4-221ENST00000525751 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
PABPC4-221ENST00000525751 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
PABPC4-221ENST00000525751 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
PABPC4-221ENST00000525751 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
PABPC4-221ENST00000525751 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
PABPC4-221ENST00000525751 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
PABPC4-221ENST00000525751 APLP2Q06481 763 aa12.85□□□□□ -0.35
PABPC4-221ENST00000525751 CFAP43Q8NDM7 1665 aa12.85□□□□□ -0.35
PABPC4-221ENST00000525751 ATP10BO94823 1461 aa12.85□□□□□ -0.35
PABPC4-221ENST00000525751 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
PABPC4-221ENST00000525751 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
PABPC4-221ENST00000525751 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
PABPC4-221ENST00000525751 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
PABPC4-221ENST00000525751 ARID3CA6NKF2 412 aa12.8□□□□□ -0.36
PABPC4-221ENST00000525751 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
PABPC4-221ENST00000525751 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
PABPC4-221ENST00000525751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
PABPC4-221ENST00000525751 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
PABPC4-221ENST00000525751 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
PABPC4-221ENST00000525751 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
PABPC4-221ENST00000525751 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
PABPC4-221ENST00000525751 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
PABPC4-221ENST00000525751 MAPKBP1O60336 1514 aa12.77□□□□□ -0.37
PABPC4-221ENST00000525751 KANK4Q5T7N3 995 aaPredicted RBP12.76□□□□□ -0.37
PABPC4-221ENST00000525751 WDR7Q9Y4E6 1490 aa12.76□□□□□ -0.37
PABPC4-221ENST00000525751 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
PABPC4-221ENST00000525751 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
PABPC4-221ENST00000525751 KIF14Q15058 1648 aa12.72□□□□□ -0.37
PABPC4-221ENST00000525751 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
PABPC4-221ENST00000525751 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
PABPC4-221ENST00000525751 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
PABPC4-221ENST00000525751 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
PABPC4-221ENST00000525751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
PABPC4-221ENST00000525751 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
PABPC4-221ENST00000525751 GLI2P10070 1586 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
PABPC4-221ENST00000525751 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
PABPC4-221ENST00000525751 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
PABPC4-221ENST00000525751 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
PABPC4-221ENST00000525751 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
PABPC4-221ENST00000525751 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms