RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CUL7Q14999 1698 aa18.03■□□□□ 0.48
RBBP4-216ENST00000525506 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
RBBP4-216ENST00000525506 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
RBBP4-216ENST00000525506 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
RBBP4-216ENST00000525506 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
RBBP4-216ENST00000525506 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
RBBP4-216ENST00000525506 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
RBBP4-216ENST00000525506 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
RBBP4-216ENST00000525506 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
RBBP4-216ENST00000525506 PTPRGP23470 1445 aa17.75■□□□□ 0.43
RBBP4-216ENST00000525506 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
RBBP4-216ENST00000525506 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
RBBP4-216ENST00000525506 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
RBBP4-216ENST00000525506 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
RBBP4-216ENST00000525506 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.42
RBBP4-216ENST00000525506 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
RBBP4-216ENST00000525506 UGGT2Q9NYU1 1516 aa17.68■□□□□ 0.42
RBBP4-216ENST00000525506 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
RBBP4-216ENST00000525506 ABCC10Q5T3U5 1492 aa17.67■□□□□ 0.42
RBBP4-216ENST00000525506 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
RBBP4-216ENST00000525506 DIP2BQ9P265 1576 aa17.66■□□□□ 0.42
RBBP4-216ENST00000525506 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
RBBP4-216ENST00000525506 TSPOAP1O95153 1857 aa17.64■□□□□ 0.41
RBBP4-216ENST00000525506 EEA1Q15075 1411 aa17.63■□□□□ 0.41
RBBP4-216ENST00000525506 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
RBBP4-216ENST00000525506 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
RBBP4-216ENST00000525506 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
RBBP4-216ENST00000525506 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
RBBP4-216ENST00000525506 ASXL2Q76L83 1435 aa17.56■□□□□ 0.4
RBBP4-216ENST00000525506 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
RBBP4-216ENST00000525506 ZCCHC11Q5TAX3 1644 aaKnown RBP17.54■□□□□ 0.4
RBBP4-216ENST00000525506 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
RBBP4-216ENST00000525506 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
RBBP4-216ENST00000525506 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.4
RBBP4-216ENST00000525506 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
RBBP4-216ENST00000525506 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
RBBP4-216ENST00000525506 ABCA8O94911 1581 aa17.48■□□□□ 0.39
RBBP4-216ENST00000525506 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
RBBP4-216ENST00000525506 GLI2P10070 1586 aa17.47■□□□□ 0.39
RBBP4-216ENST00000525506 KDM6BO15054 1643 aa17.47■□□□□ 0.39
RBBP4-216ENST00000525506 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
RBBP4-216ENST00000525506 EPRSP07814 1512 aaKnown RBP17.46■□□□□ 0.39
RBBP4-216ENST00000525506 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
RBBP4-216ENST00000525506 KIF21BO75037 1637 aa17.43■□□□□ 0.38
RBBP4-216ENST00000525506 SAMD9Q5K651 1589 aa17.42■□□□□ 0.38
RBBP4-216ENST00000525506 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
RBBP4-216ENST00000525506 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
RBBP4-216ENST00000525506 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
RBBP4-216ENST00000525506 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
RBBP4-216ENST00000525506 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
RBBP4-216ENST00000525506 ATP10BO94823 1461 aa17.34■□□□□ 0.37
RBBP4-216ENST00000525506 FHOD3Q2V2M9 1422 aa17.34■□□□□ 0.37
RBBP4-216ENST00000525506 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
RBBP4-216ENST00000525506 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.37
RBBP4-216ENST00000525506 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
RBBP4-216ENST00000525506 TEX14Q8IWB6 1497 aa17.3■□□□□ 0.36
RBBP4-216ENST00000525506 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
RBBP4-216ENST00000525506 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
RBBP4-216ENST00000525506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
RBBP4-216ENST00000525506 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
RBBP4-216ENST00000525506 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
RBBP4-216ENST00000525506 EFCAB5A4FU69 1503 aa17.25■□□□□ 0.35
RBBP4-216ENST00000525506 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
RBBP4-216ENST00000525506 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
RBBP4-216ENST00000525506 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
RBBP4-216ENST00000525506 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
RBBP4-216ENST00000525506 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
RBBP4-216ENST00000525506 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.33
RBBP4-216ENST00000525506 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
RBBP4-216ENST00000525506 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
RBBP4-216ENST00000525506 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
RBBP4-216ENST00000525506 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
RBBP4-216ENST00000525506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.09■□□□□ 0.33
RBBP4-216ENST00000525506 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
RBBP4-216ENST00000525506 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
RBBP4-216ENST00000525506 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
RBBP4-216ENST00000525506 RAPGEF3O95398 923 aa17.07■□□□□ 0.32
RBBP4-216ENST00000525506 NEO1Q92859 1461 aa17.05■□□□□ 0.32
RBBP4-216ENST00000525506 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
RBBP4-216ENST00000525506 FRMPD1Q5SYB0 1578 aa17.03■□□□□ 0.32
RBBP4-216ENST00000525506 FANCAO15360 1455 aa17.01■□□□□ 0.31
RBBP4-216ENST00000525506 KIF14Q15058 1648 aa17■□□□□ 0.31
RBBP4-216ENST00000525506 AKNAQ7Z591 1439 aa17■□□□□ 0.31
RBBP4-216ENST00000525506 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
RBBP4-216ENST00000525506 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
RBBP4-216ENST00000525506 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
RBBP4-216ENST00000525506 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
RBBP4-216ENST00000525506 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
RBBP4-216ENST00000525506 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
RBBP4-216ENST00000525506 PLCH2O75038 1416 aa16.95■□□□□ 0.3
RBBP4-216ENST00000525506 CLIP1P30622 1438 aa16.95■□□□□ 0.3
RBBP4-216ENST00000525506 TROQ12816 1431 aaPredicted RBP16.95■□□□□ 0.3
RBBP4-216ENST00000525506 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
RBBP4-216ENST00000525506 ARHGEF40Q8TER5 1519 aa16.9■□□□□ 0.3
RBBP4-216ENST00000525506 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
RBBP4-216ENST00000525506 ADAMTSL3P82987 1691 aa16.89■□□□□ 0.29
RBBP4-216ENST00000525506 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
RBBP4-216ENST00000525506 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
RBBP4-216ENST00000525506 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
RBBP4-216ENST00000525506 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms