RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
LRRK1-202ENST00000525284 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-202ENST00000525284 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-202ENST00000525284 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
LRRK1-202ENST00000525284 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
LRRK1-202ENST00000525284 GOLGA6L6A8MZA4 724 aa17.99■□□□□ 0.47
LRRK1-202ENST00000525284 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
LRRK1-202ENST00000525284 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
LRRK1-202ENST00000525284 ARID3AQ99856 593 aa17.93■□□□□ 0.46
LRRK1-202ENST00000525284 TONSLQ96HA7 1378 aa17.93■□□□□ 0.46
LRRK1-202ENST00000525284 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
LRRK1-202ENST00000525284 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
LRRK1-202ENST00000525284 TNNT3P45378 269 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-202ENST00000525284 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
LRRK1-202ENST00000525284 CASC1Q6TDU7 716 aa17.9■□□□□ 0.46
LRRK1-202ENST00000525284 NRDCO43847 1150 aa17.89■□□□□ 0.45
LRRK1-202ENST00000525284 CLSTN1O94985 981 aa17.88■□□□□ 0.45
LRRK1-202ENST00000525284 MSNP26038 577 aaKnown RBP17.86■□□□□ 0.45
LRRK1-202ENST00000525284 DRC7Q8IY82 874 aa17.81■□□□□ 0.44
LRRK1-202ENST00000525284 SENP3-EIF4A1A0A087X0R7 540 aa17.8■□□□□ 0.44
LRRK1-202ENST00000525284 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
LRRK1-202ENST00000525284 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
LRRK1-202ENST00000525284 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
LRRK1-202ENST00000525284 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
LRRK1-202ENST00000525284 FGD1P98174 961 aa17.77■□□□□ 0.43
LRRK1-202ENST00000525284 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-202ENST00000525284 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
LRRK1-202ENST00000525284 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
LRRK1-202ENST00000525284 PRM3Q9NNZ6 103 aa17.75■□□□□ 0.43
LRRK1-202ENST00000525284 GOLGA6L4A6NEF3 574 aa17.75■□□□□ 0.43
LRRK1-202ENST00000525284 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
LRRK1-202ENST00000525284 L1TD1Q5T7N2 865 aaKnown RBP17.73■□□□□ 0.43
LRRK1-202ENST00000525284 RGS3P49796 1198 aa17.72■□□□□ 0.43
LRRK1-202ENST00000525284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
LRRK1-202ENST00000525284 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
LRRK1-202ENST00000525284 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
LRRK1-202ENST00000525284 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
LRRK1-202ENST00000525284 MIER1Q8N108 512 aa17.69■□□□□ 0.42
LRRK1-202ENST00000525284 ABCC9O60706 1549 aa17.69■□□□□ 0.42
LRRK1-202ENST00000525284 KCNJ4P48050 445 aa17.67■□□□□ 0.42
LRRK1-202ENST00000525284 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
LRRK1-202ENST00000525284 NPHP1O15259 732 aa17.66■□□□□ 0.42
LRRK1-202ENST00000525284 CALRP27797 417 aaKnown RBP17.66■□□□□ 0.42
LRRK1-202ENST00000525284 PDE4CQ08493 712 aa17.66■□□□□ 0.42
LRRK1-202ENST00000525284 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
LRRK1-202ENST00000525284 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
LRRK1-202ENST00000525284 A0A0U1RQG5 324 aaPredicted RBP17.64■□□□□ 0.41
LRRK1-202ENST00000525284 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
LRRK1-202ENST00000525284 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
LRRK1-202ENST00000525284 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
LRRK1-202ENST00000525284 CHIC2Q9UKJ5 165 aa17.6■□□□□ 0.41
LRRK1-202ENST00000525284 HSCBQ8IWL3 235 aa17.59■□□□□ 0.41
LRRK1-202ENST00000525284 GOLGA6L1Q8N7Z2 621 aa17.58■□□□□ 0.41
LRRK1-202ENST00000525284 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
LRRK1-202ENST00000525284 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
LRRK1-202ENST00000525284 ISY1Q9ULR0 285 aaKnown RBP17.56■□□□□ 0.4
LRRK1-202ENST00000525284 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
LRRK1-202ENST00000525284 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
LRRK1-202ENST00000525284 GNL2Q13823 731 aaKnown RBP17.52■□□□□ 0.4
LRRK1-202ENST00000525284 GZF1Q9H116 711 aaPredicted RBP17.52■□□□□ 0.39
LRRK1-202ENST00000525284 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
LRRK1-202ENST00000525284 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
LRRK1-202ENST00000525284 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
LRRK1-202ENST00000525284 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-202ENST00000525284 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
LRRK1-202ENST00000525284 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
LRRK1-202ENST00000525284 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
LRRK1-202ENST00000525284 ZCCHC6Q5VYS8 1495 aaKnown RBP17.45■□□□□ 0.38
LRRK1-202ENST00000525284 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
LRRK1-202ENST00000525284 MCCP23508 829 aa17.44■□□□□ 0.38
LRRK1-202ENST00000525284 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
LRRK1-202ENST00000525284 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
LRRK1-202ENST00000525284 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
LRRK1-202ENST00000525284 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
LRRK1-202ENST00000525284 PTMSP20962 102 aa17.39■□□□□ 0.37
LRRK1-202ENST00000525284 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
LRRK1-202ENST00000525284 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
LRRK1-202ENST00000525284 HSP90AA2PQ14568 343 aaPredicted RBP17.38■□□□□ 0.37
LRRK1-202ENST00000525284 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
LRRK1-202ENST00000525284 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
LRRK1-202ENST00000525284 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
LRRK1-202ENST00000525284 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
LRRK1-202ENST00000525284 TPM4P67936 248 aa17.36■□□□□ 0.37
LRRK1-202ENST00000525284 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
LRRK1-202ENST00000525284 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
LRRK1-202ENST00000525284 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
LRRK1-202ENST00000525284 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.36
LRRK1-202ENST00000525284 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
LRRK1-202ENST00000525284 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
LRRK1-202ENST00000525284 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
LRRK1-202ENST00000525284 APBB1O00213 710 aa17.31■□□□□ 0.36
LRRK1-202ENST00000525284 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
LRRK1-202ENST00000525284 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
LRRK1-202ENST00000525284 KRI1Q8N9T8 703 aaKnown RBP17.31■□□□□ 0.36
LRRK1-202ENST00000525284 RGL3Q3MIN7 710 aa17.3■□□□□ 0.36
LRRK1-202ENST00000525284 MS4A1P11836 297 aa17.3■□□□□ 0.36
LRRK1-202ENST00000525284 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
LRRK1-202ENST00000525284 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-202ENST00000525284 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
LRRK1-202ENST00000525284 TPM3P06753 285 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms