RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
HMBOX1-211ENST00000524238 PPP1R15AO75807 674 aaPredicted RBP10.53□□□□□ -0.72
HMBOX1-211ENST00000524238 KIF27Q86VH2 1401 aa10.52□□□□□ -0.73
HMBOX1-211ENST00000524238 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.73
HMBOX1-211ENST00000524238 PHF23Q9BUL5 403 aaPredicted RBP10.52□□□□□ -0.73
HMBOX1-211ENST00000524238 ATAD2BQ9ULI0 1458 aa10.52□□□□□ -0.73
HMBOX1-211ENST00000524238 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
HMBOX1-211ENST00000524238 TIAM1Q13009 1591 aa10.51□□□□□ -0.73
HMBOX1-211ENST00000524238 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
HMBOX1-211ENST00000524238 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
HMBOX1-211ENST00000524238 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
HMBOX1-211ENST00000524238 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
HMBOX1-211ENST00000524238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMBOX1-211ENST00000524238 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
HMBOX1-211ENST00000524238 CFAP43Q8NDM7 1665 aa10.45□□□□□ -0.74
HMBOX1-211ENST00000524238 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
HMBOX1-211ENST00000524238 MSH5O43196 834 aa10.44□□□□□ -0.74
HMBOX1-211ENST00000524238 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
HMBOX1-211ENST00000524238 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
HMBOX1-211ENST00000524238 ITGAEP38570 1179 aa10.42□□□□□ -0.74
HMBOX1-211ENST00000524238 TONSLQ96HA7 1378 aa10.41□□□□□ -0.74
HMBOX1-211ENST00000524238 CUX1P39880 1505 aa10.39□□□□□ -0.75
HMBOX1-211ENST00000524238 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
HMBOX1-211ENST00000524238 SIN3AQ96ST3 1273 aa10.37□□□□□ -0.75
HMBOX1-211ENST00000524238 HMGXB3Q12766 1538 aa10.37□□□□□ -0.75
HMBOX1-211ENST00000524238 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
HMBOX1-211ENST00000524238 PRDM2Q13029 1718 aa10.35□□□□□ -0.75
HMBOX1-211ENST00000524238 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
HMBOX1-211ENST00000524238 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
HMBOX1-211ENST00000524238 UACAQ9BZF9 1416 aa10.34□□□□□ -0.75
HMBOX1-211ENST00000524238 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■■■□ 20.6
HMBOX1-211ENST00000524238 FYCO1Q9BQS8 1478 aa10.34□□□□□ -0.75
HMBOX1-211ENST00000524238 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
HMBOX1-211ENST00000524238 NOP58Q9Y2X3 529 aaKnown RBP10.33□□□□□ -0.76
HMBOX1-211ENST00000524238 CCDC18Q5T9S5 1454 aa10.31□□□□□ -0.76
HMBOX1-211ENST00000524238 HFM1A2PYH4 1435 aa10.3□□□□□ -0.76
HMBOX1-211ENST00000524238 PCF11O94913 1555 aaKnown RBP10.3□□□□□ -0.76
HMBOX1-211ENST00000524238 CFTRP13569 1480 aa10.3□□□□□ -0.76
HMBOX1-211ENST00000524238 NCOA2Q15596 1464 aa10.3□□□□□ -0.76
HMBOX1-211ENST00000524238 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
HMBOX1-211ENST00000524238 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
HMBOX1-211ENST00000524238 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
HMBOX1-211ENST00000524238 IGF1RP08069 1367 aa10.29□□□□□ -0.76
HMBOX1-211ENST00000524238 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
HMBOX1-211ENST00000524238 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
HMBOX1-211ENST00000524238 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
HMBOX1-211ENST00000524238 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
HMBOX1-211ENST00000524238 PTPN23Q9H3S7 1636 aa10.28□□□□□ -0.76
HMBOX1-211ENST00000524238 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.76
HMBOX1-211ENST00000524238 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.76
HMBOX1-211ENST00000524238 FGD6Q6ZV73 1430 aa10.27□□□□□ -0.77
HMBOX1-211ENST00000524238 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
HMBOX1-211ENST00000524238 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMBOX1-211ENST00000524238 HIRIP3Q9BW71 556 aaPredicted RBP10.25□□□□□ -0.77
HMBOX1-211ENST00000524238 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
HMBOX1-211ENST00000524238 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
HMBOX1-211ENST00000524238 HECW1Q76N89 1606 aa10.23□□□□□ -0.77
HMBOX1-211ENST00000524238 IRX6P78412 446 aaPredicted RBP10.23□□□□□ -0.77
HMBOX1-211ENST00000524238 IPO9Q96P70 1041 aaKnown RBP10.23□□□□□ -0.77
HMBOX1-211ENST00000524238 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
HMBOX1-211ENST00000524238 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
HMBOX1-211ENST00000524238 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.77
HMBOX1-211ENST00000524238 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.77
HMBOX1-211ENST00000524238 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.77
HMBOX1-211ENST00000524238 AKNAQ7Z591 1439 aa10.21□□□□□ -0.77
HMBOX1-211ENST00000524238 SMG6Q86US8 1419 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-211ENST00000524238 USP35Q9P2H5 1018 aa10.21□□□□□ -0.78
HMBOX1-211ENST00000524238 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.78
HMBOX1-211ENST00000524238 GCC2Q8IWJ2 1684 aa10.21□□□□□ -0.78
HMBOX1-211ENST00000524238 CTTNBP2Q8WZ74 1663 aa10.21□□□□□ -0.78
HMBOX1-211ENST00000524238 NAIPQ13075 1403 aa10.2□□□□□ -0.78
HMBOX1-211ENST00000524238 HSPA5P11021 654 aaKnown RBP10.2□□□□□ -0.78
HMBOX1-211ENST00000524238 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
HMBOX1-211ENST00000524238 CUL7Q14999 1698 aa10.19□□□□□ -0.78
HMBOX1-211ENST00000524238 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-211ENST00000524238 B4GALNT3Q6L9W6 998 aa10.19□□□□□ -0.78
HMBOX1-211ENST00000524238 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
HMBOX1-211ENST00000524238 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
HMBOX1-211ENST00000524238 MTUS2Q5JR59 1369 aa10.18□□□□□ -0.78
HMBOX1-211ENST00000524238 MYOM3Q5VTT5 1437 aa10.18□□□□□ -0.78
HMBOX1-211ENST00000524238 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
HMBOX1-211ENST00000524238 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
HMBOX1-211ENST00000524238 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
HMBOX1-211ENST00000524238 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
HMBOX1-211ENST00000524238 NBR1Q14596 966 aa10.16□□□□□ -0.78
HMBOX1-211ENST00000524238 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
HMBOX1-211ENST00000524238 FAM9BQ8IZU0 186 aa10.16□□□□□ -0.78
HMBOX1-211ENST00000524238 NUDCQ9Y266 331 aa10.16□□□□□ -0.78
HMBOX1-211ENST00000524238 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.78
HMBOX1-211ENST00000524238 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
HMBOX1-211ENST00000524238 SNAPC4Q5SXM2 1469 aa10.14□□□□□ -0.79
HMBOX1-211ENST00000524238 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
HMBOX1-211ENST00000524238 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
HMBOX1-211ENST00000524238 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
HMBOX1-211ENST00000524238 PTPRKQ15262 1439 aa10.12□□□□□ -0.79
HMBOX1-211ENST00000524238 ARID4BQ4LE39 1312 aaPredicted RBP10.12□□□□□ -0.79
HMBOX1-211ENST00000524238 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
HMBOX1-211ENST00000524238 MIA2Q96PC5 1412 aa10.11□□□□□ -0.79
HMBOX1-211ENST00000524238 UGGT2Q9NYU1 1516 aa10.11□□□□□ -0.79
HMBOX1-211ENST00000524238 SAMD9Q5K651 1589 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms