RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-224ENST00000524126 DHX57Q6P158 1386 aaKnown RBP14.38□□□□□ -0.11
SPIDR-224ENST00000524126 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-224ENST00000524126 IL27Q8NEV9 243 aa14.37□□□□□ -0.11
SPIDR-224ENST00000524126 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-224ENST00000524126 UBE2Q2Q8WVN8 375 aa14.36□□□□□ -0.11
SPIDR-224ENST00000524126 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
SPIDR-224ENST00000524126 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
SPIDR-224ENST00000524126 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
SPIDR-224ENST00000524126 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
SPIDR-224ENST00000524126 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
SPIDR-224ENST00000524126 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
SPIDR-224ENST00000524126 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
SPIDR-224ENST00000524126 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
SPIDR-224ENST00000524126 EEA1Q15075 1411 aa14.27□□□□□ -0.12
SPIDR-224ENST00000524126 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.13
SPIDR-224ENST00000524126 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
SPIDR-224ENST00000524126 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
SPIDR-224ENST00000524126 CUX2O14529 1486 aa14.26□□□□□ -0.13
SPIDR-224ENST00000524126 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
SPIDR-224ENST00000524126 GOLGA3Q08378 1498 aa14.24□□□□□ -0.13
SPIDR-224ENST00000524126 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-224ENST00000524126 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.14
SPIDR-224ENST00000524126 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
SPIDR-224ENST00000524126 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
SPIDR-224ENST00000524126 KIF21BO75037 1637 aa14.19□□□□□ -0.14
SPIDR-224ENST00000524126 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
SPIDR-224ENST00000524126 IGF1RP08069 1367 aa14.16□□□□□ -0.14
SPIDR-224ENST00000524126 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
SPIDR-224ENST00000524126 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-224ENST00000524126 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
SPIDR-224ENST00000524126 CLIP1P30622 1438 aa14.15□□□□□ -0.14
SPIDR-224ENST00000524126 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
SPIDR-224ENST00000524126 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
SPIDR-224ENST00000524126 B4GALNT3Q6L9W6 998 aa14.12□□□□□ -0.15
SPIDR-224ENST00000524126 VPS8Q8N3P4 1428 aa14.12□□□□□ -0.15
SPIDR-224ENST00000524126 ANP32CO43423 234 aa14.11□□□□□ -0.15
SPIDR-224ENST00000524126 EIF5BO60841 1220 aaKnown RBP14.11□□□□□ -0.15
SPIDR-224ENST00000524126 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
SPIDR-224ENST00000524126 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPIDR-224ENST00000524126 ABCA10Q8WWZ4 1543 aa14.08□□□□□ -0.16
SPIDR-224ENST00000524126 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
SPIDR-224ENST00000524126 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
SPIDR-224ENST00000524126 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
SPIDR-224ENST00000524126 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
SPIDR-224ENST00000524126 ERICH3Q5RHP9 1530 aa14.04□□□□□ -0.16
SPIDR-224ENST00000524126 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
SPIDR-224ENST00000524126 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.16
SPIDR-224ENST00000524126 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.17
SPIDR-224ENST00000524126 TARBP1Q13395 1621 aaKnown RBP14.02□□□□□ -0.17
SPIDR-224ENST00000524126 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-224ENST00000524126 P3H3Q8IVL6 736 aa14.01□□□□□ -0.17
SPIDR-224ENST00000524126 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-224ENST00000524126 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
SPIDR-224ENST00000524126 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
SPIDR-224ENST00000524126 WASHC2AQ641Q2 1341 aa13.99□□□□□ -0.17
SPIDR-224ENST00000524126 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
SPIDR-224ENST00000524126 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
SPIDR-224ENST00000524126 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
SPIDR-224ENST00000524126 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
SPIDR-224ENST00000524126 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
SPIDR-224ENST00000524126 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
SPIDR-224ENST00000524126 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
SPIDR-224ENST00000524126 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
SPIDR-224ENST00000524126 WDR62O43379 1518 aa13.95□□□□□ -0.18
SPIDR-224ENST00000524126 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
SPIDR-224ENST00000524126 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
SPIDR-224ENST00000524126 NEFMP07197 916 aa13.94□□□□□ -0.18
SPIDR-224ENST00000524126 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
SPIDR-224ENST00000524126 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-224ENST00000524126 WASHC2CQ9Y4E1 1318 aa13.91□□□□□ -0.18
SPIDR-224ENST00000524126 NPM2Q86SE8 214 aaKnown RBP13.89□□□□□ -0.19
SPIDR-224ENST00000524126 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
SPIDR-224ENST00000524126 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
SPIDR-224ENST00000524126 CUL7Q14999 1698 aa13.87□□□□□ -0.19
SPIDR-224ENST00000524126 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
SPIDR-224ENST00000524126 CCDC184Q52MB2 194 aa13.85□□□□□ -0.19
SPIDR-224ENST00000524126 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
SPIDR-224ENST00000524126 CCNB3Q8WWL7 1395 aa13.85□□□□□ -0.19
SPIDR-224ENST00000524126 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
SPIDR-224ENST00000524126 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
SPIDR-224ENST00000524126 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
SPIDR-224ENST00000524126 FBLN2P98095 1184 aa13.83□□□□□ -0.2
SPIDR-224ENST00000524126 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
SPIDR-224ENST00000524126 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
SPIDR-224ENST00000524126 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
SPIDR-224ENST00000524126 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
SPIDR-224ENST00000524126 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
SPIDR-224ENST00000524126 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
SPIDR-224ENST00000524126 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
SPIDR-224ENST00000524126 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
SPIDR-224ENST00000524126 GSE1Q14687 1217 aa13.77□□□□□ -0.21
SPIDR-224ENST00000524126 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
SPIDR-224ENST00000524126 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
SPIDR-224ENST00000524126 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
SPIDR-224ENST00000524126 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
SPIDR-224ENST00000524126 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-224ENST00000524126 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
SPIDR-224ENST00000524126 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
SPIDR-224ENST00000524126 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms