RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
FAM49B-228ENST00000523993 BIVM-ERCC5R4GMW8 1640 aa10.79□□□□□ -0.68
FAM49B-228ENST00000523993 ABCA10Q8WWZ4 1543 aa10.79□□□□□ -0.68
FAM49B-228ENST00000523993 GRIN2BQ13224 1484 aa10.78□□□□□ -0.68
FAM49B-228ENST00000523993 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
FAM49B-228ENST00000523993 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
FAM49B-228ENST00000523993 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
FAM49B-228ENST00000523993 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
FAM49B-228ENST00000523993 FOXD4L1Q9NU39 408 aa10.76□□□□□ -0.69
FAM49B-228ENST00000523993 SYNJ2O15056 1496 aa10.75□□□□□ -0.69
FAM49B-228ENST00000523993 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
FAM49B-228ENST00000523993 SYNJ1O43426 1573 aa10.74□□□□□ -0.69
FAM49B-228ENST00000523993 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
FAM49B-228ENST00000523993 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
FAM49B-228ENST00000523993 ARAP1Q96P48 1450 aa10.71□□□□□ -0.69
FAM49B-228ENST00000523993 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
FAM49B-228ENST00000523993 FBLN2P98095 1184 aa10.69□□□□□ -0.7
FAM49B-228ENST00000523993 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
FAM49B-228ENST00000523993 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
FAM49B-228ENST00000523993 ERICH3Q5RHP9 1530 aa10.67□□□□□ -0.7
FAM49B-228ENST00000523993 GRIN2AQ12879 1464 aa10.65□□□□□ -0.7
FAM49B-228ENST00000523993 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
FAM49B-228ENST00000523993 CYB5RLQ6IPT4 315 aa10.64□□□□□ -0.71
FAM49B-228ENST00000523993 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
FAM49B-228ENST00000523993 NUP160Q12769 1436 aa10.63□□□□□ -0.71
FAM49B-228ENST00000523993 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
FAM49B-228ENST00000523993 CEP170Q5SW79 1584 aa10.61□□□□□ -0.71
FAM49B-228ENST00000523993 ERCC6L2Q5T890 1561 aa10.55□□□□□ -0.72
FAM49B-228ENST00000523993 CUL7Q14999 1698 aa10.53□□□□□ -0.72
FAM49B-228ENST00000523993 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
FAM49B-228ENST00000523993 IGF1RP08069 1367 aa10.5□□□□□ -0.73
FAM49B-228ENST00000523993 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
FAM49B-228ENST00000523993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.48□□□□□ -0.73
FAM49B-228ENST00000523993 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
FAM49B-228ENST00000523993 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
FAM49B-228ENST00000523993 PRG4Q92954 1404 aaPredicted RBP10.46□□□□□ -0.74
FAM49B-228ENST00000523993 KIAA0586Q9BVV6 1533 aa10.46□□□□□ -0.74
FAM49B-228ENST00000523993 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
FAM49B-228ENST00000523993 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
FAM49B-228ENST00000523993 MAPKBP1O60336 1514 aa10.39□□□□□ -0.75
FAM49B-228ENST00000523993 ADCY10Q96PN6 1610 aa10.39□□□□□ -0.75
FAM49B-228ENST00000523993 IQGAP2Q13576 1575 aa10.37□□□□□ -0.75
FAM49B-228ENST00000523993 FKBP8Q14318 412 aa10.36□□□□□ -0.75
FAM49B-228ENST00000523993 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
FAM49B-228ENST00000523993 ABCC10Q5T3U5 1492 aa10.34□□□□□ -0.75
FAM49B-228ENST00000523993 RAPGEF2Q9Y4G8 1499 aa10.34□□□□□ -0.75
FAM49B-228ENST00000523993 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
FAM49B-228ENST00000523993 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
FAM49B-228ENST00000523993 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
FAM49B-228ENST00000523993 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
FAM49B-228ENST00000523993 POTEHQ6S545 545 aa10.32□□□□□ -0.76
FAM49B-228ENST00000523993 DISP1Q96F81 1524 aa10.32□□□□□ -0.76
FAM49B-228ENST00000523993 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
FAM49B-228ENST00000523993 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
FAM49B-228ENST00000523993 PTPRGP23470 1445 aa10.3□□□□□ -0.76
FAM49B-228ENST00000523993 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
FAM49B-228ENST00000523993 PRXQ9BXM0 1461 aa10.29□□□□□ -0.76
FAM49B-228ENST00000523993 KIAA0556O60303 1618 aa10.29□□□□□ -0.76
FAM49B-228ENST00000523993 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
FAM49B-228ENST00000523993 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
FAM49B-228ENST00000523993 GLI2P10070 1586 aa10.26□□□□□ -0.77
FAM49B-228ENST00000523993 UACAQ9BZF9 1416 aa10.25□□□□□ -0.77
FAM49B-228ENST00000523993 KDM5BQ9UGL1 1544 aa10.25□□□□□ -0.77
FAM49B-228ENST00000523993 TSPOAP1O95153 1857 aa10.24□□□□□ -0.77
FAM49B-228ENST00000523993 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
FAM49B-228ENST00000523993 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
FAM49B-228ENST00000523993 PLB1Q6P1J6 1458 aa10.23□□□□□ -0.77
FAM49B-228ENST00000523993 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
FAM49B-228ENST00000523993 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
FAM49B-228ENST00000523993 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
FAM49B-228ENST00000523993 ASXL2Q76L83 1435 aa10.21□□□□□ -0.78
FAM49B-228ENST00000523993 KDM6BO15054 1643 aa10.2□□□□□ -0.78
FAM49B-228ENST00000523993 ABCA8O94911 1581 aa10.2□□□□□ -0.78
FAM49B-228ENST00000523993 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
FAM49B-228ENST00000523993 EEA1Q15075 1411 aa10.18□□□□□ -0.78
FAM49B-228ENST00000523993 CAPN15O75808 1086 aa10.18□□□□□ -0.78
FAM49B-228ENST00000523993 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
FAM49B-228ENST00000523993 SAMD9Q5K651 1589 aa10.17□□□□□ -0.78
FAM49B-228ENST00000523993 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.79
FAM49B-228ENST00000523993 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
FAM49B-228ENST00000523993 TEX14Q8IWB6 1497 aa10.12□□□□□ -0.79
FAM49B-228ENST00000523993 KIF21BO75037 1637 aa10.12□□□□□ -0.79
FAM49B-228ENST00000523993 DSG3P32926 999 aa10.12□□□□□ -0.79
FAM49B-228ENST00000523993 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
FAM49B-228ENST00000523993 U3KPZ7 1027 aaPredicted RBP10.11□□□□□ -0.79
FAM49B-228ENST00000523993 MAGI3Q5TCQ9 1506 aa10.1□□□□□ -0.79
FAM49B-228ENST00000523993 RAPGEF6Q8TEU7 1601 aa10.09□□□□□ -0.79
FAM49B-228ENST00000523993 COL17A1Q9UMD9 1497 aaPredicted RBP10.09□□□□□ -0.79
FAM49B-228ENST00000523993 ATP10BO94823 1461 aa10.07□□□□□ -0.8
FAM49B-228ENST00000523993 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
FAM49B-228ENST00000523993 EFCAB5A4FU69 1503 aa10.07□□□□□ -0.8
FAM49B-228ENST00000523993 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
FAM49B-228ENST00000523993 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
FAM49B-228ENST00000523993 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
FAM49B-228ENST00000523993 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
FAM49B-228ENST00000523993 NUP153P49790 1475 aaKnown RBP10.03□□□□□ -0.8
FAM49B-228ENST00000523993 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.8
FAM49B-228ENST00000523993 PHLDB1Q86UU1 1377 aa10.01□□□□□ -0.81
FAM49B-228ENST00000523993 APLP2Q06481 763 aa10□□□□□ -0.81
FAM49B-228ENST00000523993 P3H3Q8IVL6 736 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms