RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-222ENST00000523953 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
CA1-222ENST00000523953 CUL7Q14999 1698 aa10.33□□□□□ -0.76
CA1-222ENST00000523953 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
CA1-222ENST00000523953 CARMIL1Q5VZK9 1371 aa10.32□□□□□ -0.76
CA1-222ENST00000523953 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
CA1-222ENST00000523953 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
CA1-222ENST00000523953 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
CA1-222ENST00000523953 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
CA1-222ENST00000523953 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
CA1-222ENST00000523953 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
CA1-222ENST00000523953 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
CA1-222ENST00000523953 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.76
CA1-222ENST00000523953 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
CA1-222ENST00000523953 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.77
CA1-222ENST00000523953 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
CA1-222ENST00000523953 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
CA1-222ENST00000523953 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
CA1-222ENST00000523953 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
CA1-222ENST00000523953 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
CA1-222ENST00000523953 CCNB3Q8WWL7 1395 aa10.24□□□□□ -0.77
CA1-222ENST00000523953 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
CA1-222ENST00000523953 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
CA1-222ENST00000523953 DHX57Q6P158 1386 aaKnown RBP10.23□□□□□ -0.77
CA1-222ENST00000523953 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
CA1-222ENST00000523953 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
CA1-222ENST00000523953 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
CA1-222ENST00000523953 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
CA1-222ENST00000523953 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.77
CA1-222ENST00000523953 NESP48681 1621 aa10.21□□□□□ -0.78
CA1-222ENST00000523953 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
CA1-222ENST00000523953 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
CA1-222ENST00000523953 SAMD9Q5K651 1589 aa10.19□□□□□ -0.78
CA1-222ENST00000523953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.19□□□□□ -0.78
CA1-222ENST00000523953 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
CA1-222ENST00000523953 KIF21AQ7Z4S6 1674 aa10.18□□□□□ -0.78
CA1-222ENST00000523953 THOC2Q8NI27 1593 aaKnown RBP10.18□□□□□ -0.78
CA1-222ENST00000523953 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
CA1-222ENST00000523953 TARBP1Q13395 1621 aaKnown RBP10.16□□□□□ -0.78
CA1-222ENST00000523953 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.79
CA1-222ENST00000523953 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
CA1-222ENST00000523953 GAPVD1Q14C86 1478 aa10.14□□□□□ -0.79
CA1-222ENST00000523953 ZBTB22O15209 634 aa10.13□□□□□ -0.79
CA1-222ENST00000523953 PHLDB1Q86UU1 1377 aa10.12□□□□□ -0.79
CA1-222ENST00000523953 CENPBP07199 599 aaPredicted RBP10.12□□□□□ -0.79
CA1-222ENST00000523953 FHOD3Q2V2M9 1422 aa10.12□□□□□ -0.79
CA1-222ENST00000523953 MAPKBP1O60336 1514 aa10.11□□□□□ -0.79
CA1-222ENST00000523953 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
CA1-222ENST00000523953 DNAJC5BQ9UF47 199 aa10.1□□□□□ -0.79
CA1-222ENST00000523953 GRIN2BQ13224 1484 aa10.1□□□□□ -0.79
CA1-222ENST00000523953 PBRM1Q86U86 1689 aa10.1□□□□□ -0.79
CA1-222ENST00000523953 RAB3GAP2Q9H2M9 1393 aa10.09□□□□□ -0.79
CA1-222ENST00000523953 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
CA1-222ENST00000523953 ADAMTS12P58397 1594 aa10.07□□□□□ -0.8
CA1-222ENST00000523953 EHBP1L1Q8N3D4 1523 aa10.07□□□□□ -0.8
CA1-222ENST00000523953 MRC2Q9UBG0 1479 aa10.07□□□□□ -0.8
CA1-222ENST00000523953 LRRIQ1Q96JM4 1722 aa10.07□□□□□ -0.8
CA1-222ENST00000523953 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
CA1-222ENST00000523953 NEUROD1Q13562 356 aa10.06□□□□□ -0.8
CA1-222ENST00000523953 CCDC18Q5T9S5 1454 aa10.06□□□□□ -0.8
CA1-222ENST00000523953 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
CA1-222ENST00000523953 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
CA1-222ENST00000523953 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
CA1-222ENST00000523953 SUPT6HQ7KZ85 1726 aaKnown RBP10.04□□□□□ -0.8
CA1-222ENST00000523953 IQGAP2Q13576 1575 aa10.03□□□□□ -0.8
CA1-222ENST00000523953 WDR62O43379 1518 aa10.03□□□□□ -0.8
CA1-222ENST00000523953 HECW1Q76N89 1606 aa10.03□□□□□ -0.8
CA1-222ENST00000523953 UGGT2Q9NYU1 1516 aa10.02□□□□□ -0.81
CA1-222ENST00000523953 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
CA1-222ENST00000523953 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
CA1-222ENST00000523953 MYOM3Q5VTT5 1437 aa10.01□□□□□ -0.81
CA1-222ENST00000523953 TCOF1Q13428 1488 aaKnown RBP10□□□□□ -0.81
CA1-222ENST00000523953 HFM1A2PYH4 1435 aa10□□□□□ -0.81
CA1-222ENST00000523953 NCOA2Q15596 1464 aa10□□□□□ -0.81
CA1-222ENST00000523953 MIER1Q8N108 512 aa10□□□□□ -0.81
CA1-222ENST00000523953 MTUS2Q5JR59 1369 aa9.99□□□□□ -0.81
CA1-222ENST00000523953 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
CA1-222ENST00000523953 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
CA1-222ENST00000523953 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
CA1-222ENST00000523953 GCC2Q8IWJ2 1684 aa9.97□□□□□ -0.81
CA1-222ENST00000523953 FAM50AQ14320 339 aaKnown RBP9.96□□□□□ -0.81
CA1-222ENST00000523953 UACAQ9BZF9 1416 aa9.96□□□□□ -0.81
CA1-222ENST00000523953 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.81
CA1-222ENST00000523953 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
CA1-222ENST00000523953 MIA2Q96PC5 1412 aa9.95□□□□□ -0.82
CA1-222ENST00000523953 ITGAEP38570 1179 aa9.95□□□□□ -0.82
CA1-222ENST00000523953 KIAA0586Q9BVV6 1533 aa9.95□□□□□ -0.82
CA1-222ENST00000523953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.94□□□□□ -0.82
CA1-222ENST00000523953 NAIPQ13075 1403 aa9.94□□□□□ -0.82
CA1-222ENST00000523953 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
CA1-222ENST00000523953 KIAA0556O60303 1618 aa9.94□□□□□ -0.82
CA1-222ENST00000523953 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
CA1-222ENST00000523953 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
CA1-222ENST00000523953 EIF4G3O43432 1585 aaKnown RBP9.91□□□□□ -0.82
CA1-222ENST00000523953 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
CA1-222ENST00000523953 DISP1Q96F81 1524 aa9.91□□□□□ -0.82
CA1-222ENST00000523953 MAGI1Q96QZ7 1491 aaPredicted RBP9.91□□□□□ -0.82
CA1-222ENST00000523953 GRIN2AQ12879 1464 aa9.9□□□□□ -0.82
CA1-222ENST00000523953 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
CA1-222ENST00000523953 RAPGEF6Q8TEU7 1601 aa9.88□□□□□ -0.83
CA1-222ENST00000523953 PPP1R15AO75807 674 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms