RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
TNPO1-213ENST00000523768 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
TNPO1-213ENST00000523768 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
TNPO1-213ENST00000523768 CFAP43Q8NDM7 1665 aa16.67■□□□□ 0.26
TNPO1-213ENST00000523768 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
TNPO1-213ENST00000523768 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
TNPO1-213ENST00000523768 PCF11O94913 1555 aaKnown RBP16.65■□□□□ 0.26
TNPO1-213ENST00000523768 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.257e-7■■■■■ 31.2
TNPO1-213ENST00000523768 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
TNPO1-213ENST00000523768 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
TNPO1-213ENST00000523768 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
TNPO1-213ENST00000523768 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
TNPO1-213ENST00000523768 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
TNPO1-213ENST00000523768 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
TNPO1-213ENST00000523768 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
TNPO1-213ENST00000523768 P3H3Q8IVL6 736 aa16.58■□□□□ 0.25
TNPO1-213ENST00000523768 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
TNPO1-213ENST00000523768 MIER1Q8N108 512 aa16.58■□□□□ 0.24
TNPO1-213ENST00000523768 ITGAEP38570 1179 aa16.56■□□□□ 0.24
TNPO1-213ENST00000523768 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
TNPO1-213ENST00000523768 SETD5Q9C0A6 1442 aa16.55■□□□□ 0.24
TNPO1-213ENST00000523768 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
TNPO1-213ENST00000523768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
TNPO1-213ENST00000523768 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
TNPO1-213ENST00000523768 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
TNPO1-213ENST00000523768 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
TNPO1-213ENST00000523768 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
TNPO1-213ENST00000523768 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
TNPO1-213ENST00000523768 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
TNPO1-213ENST00000523768 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
TNPO1-213ENST00000523768 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
TNPO1-213ENST00000523768 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
TNPO1-213ENST00000523768 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
TNPO1-213ENST00000523768 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
TNPO1-213ENST00000523768 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
TNPO1-213ENST00000523768 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
TNPO1-213ENST00000523768 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
TNPO1-213ENST00000523768 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
TNPO1-213ENST00000523768 MTUS2Q5JR59 1369 aa16.4■□□□□ 0.22
TNPO1-213ENST00000523768 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
TNPO1-213ENST00000523768 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
TNPO1-213ENST00000523768 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
TNPO1-213ENST00000523768 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
TNPO1-213ENST00000523768 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
TNPO1-213ENST00000523768 MRC2Q9UBG0 1479 aa16.35■□□□□ 0.21
TNPO1-213ENST00000523768 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
TNPO1-213ENST00000523768 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.21
TNPO1-213ENST00000523768 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
TNPO1-213ENST00000523768 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
TNPO1-213ENST00000523768 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
TNPO1-213ENST00000523768 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
TNPO1-213ENST00000523768 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
TNPO1-213ENST00000523768 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
TNPO1-213ENST00000523768 PTPRKQ15262 1439 aa16.31■□□□□ 0.2
TNPO1-213ENST00000523768 UGGT2Q9NYU1 1516 aa16.3■□□□□ 0.2
TNPO1-213ENST00000523768 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
TNPO1-213ENST00000523768 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
TNPO1-213ENST00000523768 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.2
TNPO1-213ENST00000523768 UACAQ9BZF9 1416 aa16.27■□□□□ 0.2
TNPO1-213ENST00000523768 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
TNPO1-213ENST00000523768 NAIPQ13075 1403 aa16.25■□□□□ 0.19
TNPO1-213ENST00000523768 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
TNPO1-213ENST00000523768 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
TNPO1-213ENST00000523768 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
TNPO1-213ENST00000523768 WDR62O43379 1518 aa16.23■□□□□ 0.19
TNPO1-213ENST00000523768 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
TNPO1-213ENST00000523768 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
TNPO1-213ENST00000523768 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
TNPO1-213ENST00000523768 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
TNPO1-213ENST00000523768 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
TNPO1-213ENST00000523768 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
TNPO1-213ENST00000523768 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
TNPO1-213ENST00000523768 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
TNPO1-213ENST00000523768 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
TNPO1-213ENST00000523768 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
TNPO1-213ENST00000523768 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
TNPO1-213ENST00000523768 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
TNPO1-213ENST00000523768 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
TNPO1-213ENST00000523768 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.16
TNPO1-213ENST00000523768 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.16
TNPO1-213ENST00000523768 DENND4BO75064 1496 aaPredicted RBP16.07■□□□□ 0.16
TNPO1-213ENST00000523768 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
TNPO1-213ENST00000523768 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
TNPO1-213ENST00000523768 RAPGEF6Q8TEU7 1601 aa16.07■□□□□ 0.16
TNPO1-213ENST00000523768 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
TNPO1-213ENST00000523768 KDM6BO15054 1643 aa16.04■□□□□ 0.16
TNPO1-213ENST00000523768 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
TNPO1-213ENST00000523768 DAPK1P53355 1430 aa16.03■□□□□ 0.16
TNPO1-213ENST00000523768 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
TNPO1-213ENST00000523768 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
TNPO1-213ENST00000523768 ERCC6Q03468 1493 aa16.02■□□□□ 0.16
TNPO1-213ENST00000523768 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
TNPO1-213ENST00000523768 ARID3CA6NKF2 412 aa16.02■□□□□ 0.15
TNPO1-213ENST00000523768 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
TNPO1-213ENST00000523768 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
TNPO1-213ENST00000523768 TRIM52Q96A61 297 aa16■□□□□ 0.15
TNPO1-213ENST00000523768 ABCC5O15440 1437 aa16■□□□□ 0.15
TNPO1-213ENST00000523768 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
TNPO1-213ENST00000523768 CEP170Q5SW79 1584 aa16■□□□□ 0.15
TNPO1-213ENST00000523768 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms