RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
TNIP1-218ENST00000523338 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
TNIP1-218ENST00000523338 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
TNIP1-218ENST00000523338 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
TNIP1-218ENST00000523338 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
TNIP1-218ENST00000523338 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
TNIP1-218ENST00000523338 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
TNIP1-218ENST00000523338 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
TNIP1-218ENST00000523338 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
TNIP1-218ENST00000523338 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
TNIP1-218ENST00000523338 TIAM1Q13009 1591 aa18.34■□□□□ 0.53
TNIP1-218ENST00000523338 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
TNIP1-218ENST00000523338 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
TNIP1-218ENST00000523338 SIN3AQ96ST3 1273 aa18.31■□□□□ 0.52
TNIP1-218ENST00000523338 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
TNIP1-218ENST00000523338 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
TNIP1-218ENST00000523338 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
TNIP1-218ENST00000523338 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
TNIP1-218ENST00000523338 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
TNIP1-218ENST00000523338 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
TNIP1-218ENST00000523338 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
TNIP1-218ENST00000523338 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
TNIP1-218ENST00000523338 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
TNIP1-218ENST00000523338 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■■■□ 26.5
TNIP1-218ENST00000523338 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
TNIP1-218ENST00000523338 CASKIN1Q8WXD9 1431 aa18.16■□□□□ 0.5
TNIP1-218ENST00000523338 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
TNIP1-218ENST00000523338 CUL7Q14999 1698 aa18.14■□□□□ 0.49
TNIP1-218ENST00000523338 MAPKBP1O60336 1514 aa18.14■□□□□ 0.49
TNIP1-218ENST00000523338 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
TNIP1-218ENST00000523338 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
TNIP1-218ENST00000523338 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
TNIP1-218ENST00000523338 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
TNIP1-218ENST00000523338 CFAP43Q8NDM7 1665 aa18.1■□□□□ 0.49
TNIP1-218ENST00000523338 EFCAB5A4FU69 1503 aa18.1■□□□□ 0.49
TNIP1-218ENST00000523338 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
TNIP1-218ENST00000523338 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
TNIP1-218ENST00000523338 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
TNIP1-218ENST00000523338 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
TNIP1-218ENST00000523338 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
TNIP1-218ENST00000523338 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
TNIP1-218ENST00000523338 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
TNIP1-218ENST00000523338 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
TNIP1-218ENST00000523338 FBLN2P98095 1184 aa18.03■□□□□ 0.48
TNIP1-218ENST00000523338 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
TNIP1-218ENST00000523338 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
TNIP1-218ENST00000523338 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
TNIP1-218ENST00000523338 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
TNIP1-218ENST00000523338 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
TNIP1-218ENST00000523338 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
TNIP1-218ENST00000523338 SAMD9Q5K651 1589 aa17.96■□□□□ 0.47
TNIP1-218ENST00000523338 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
TNIP1-218ENST00000523338 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
TNIP1-218ENST00000523338 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
TNIP1-218ENST00000523338 MYOM3Q5VTT5 1437 aa17.94■□□□□ 0.46
TNIP1-218ENST00000523338 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
TNIP1-218ENST00000523338 FOXD1Q16676 465 aa17.93■□□□□ 0.46
TNIP1-218ENST00000523338 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
TNIP1-218ENST00000523338 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
TNIP1-218ENST00000523338 PBRM1Q86U86 1689 aa17.89■□□□□ 0.45
TNIP1-218ENST00000523338 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
TNIP1-218ENST00000523338 NAIPQ13075 1403 aa17.88■□□□□ 0.45
TNIP1-218ENST00000523338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
TNIP1-218ENST00000523338 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
TNIP1-218ENST00000523338 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
TNIP1-218ENST00000523338 HFM1A2PYH4 1435 aa17.86■□□□□ 0.45
TNIP1-218ENST00000523338 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
TNIP1-218ENST00000523338 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
TNIP1-218ENST00000523338 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
TNIP1-218ENST00000523338 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
TNIP1-218ENST00000523338 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.45
TNIP1-218ENST00000523338 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.44
TNIP1-218ENST00000523338 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.44
TNIP1-218ENST00000523338 UACAQ9BZF9 1416 aa17.82■□□□□ 0.44
TNIP1-218ENST00000523338 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
TNIP1-218ENST00000523338 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
TNIP1-218ENST00000523338 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
TNIP1-218ENST00000523338 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
TNIP1-218ENST00000523338 HECW1Q76N89 1606 aa17.77■□□□□ 0.43
TNIP1-218ENST00000523338 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
TNIP1-218ENST00000523338 KDM6BO15054 1643 aa17.75■□□□□ 0.43
TNIP1-218ENST00000523338 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
TNIP1-218ENST00000523338 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
TNIP1-218ENST00000523338 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
TNIP1-218ENST00000523338 DISP1Q96F81 1524 aa17.73■□□□□ 0.43
TNIP1-218ENST00000523338 ANP32CO43423 234 aa17.73■□□□□ 0.43
TNIP1-218ENST00000523338 WDR62O43379 1518 aa17.72■□□□□ 0.43
TNIP1-218ENST00000523338 BCANQ96GW7 911 aa17.72■□□□□ 0.43
TNIP1-218ENST00000523338 ARHGEF11O15085 1522 aa17.71■□□□□ 0.43
TNIP1-218ENST00000523338 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
TNIP1-218ENST00000523338 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-218ENST00000523338 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
TNIP1-218ENST00000523338 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
TNIP1-218ENST00000523338 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
TNIP1-218ENST00000523338 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
TNIP1-218ENST00000523338 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-218ENST00000523338 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-218ENST00000523338 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
TNIP1-218ENST00000523338 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
TNIP1-218ENST00000523338 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms