RNA–Protein interactions for RNA: ENST00000523204.1

AP3B1-208, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-208ENST00000523204 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
AP3B1-208ENST00000523204 PROM2Q8N271 834 aa17.81■□□□□ 0.44
AP3B1-208ENST00000523204 CLCN6P51797 869 aa17.78■□□□□ 0.44
AP3B1-208ENST00000523204 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
AP3B1-208ENST00000523204 ZNF579Q8NAF0 562 aaKnown RBP17.73■□□□□ 0.43
AP3B1-208ENST00000523204 NPM1P06748 294 aaKnown RBP eCLIP17.71■□□□□ 0.43
AP3B1-208ENST00000523204 NESP48681 1621 aa17.69■□□□□ 0.42
AP3B1-208ENST00000523204 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
AP3B1-208ENST00000523204 MNX1P50219 401 aaPredicted RBP17.67■□□□□ 0.42
AP3B1-208ENST00000523204 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
AP3B1-208ENST00000523204 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
AP3B1-208ENST00000523204 DCBLD2Q96PD2 775 aa17.57■□□□□ 0.4
AP3B1-208ENST00000523204 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
AP3B1-208ENST00000523204 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
AP3B1-208ENST00000523204 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
AP3B1-208ENST00000523204 LHX8Q68G74 356 aa17.51■□□□□ 0.39
AP3B1-208ENST00000523204 PHF12Q96QT6 1004 aa17.51■□□□□ 0.39
AP3B1-208ENST00000523204 GALR2O43603 387 aaPredicted RBP17.49■□□□□ 0.39
AP3B1-208ENST00000523204 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
AP3B1-208ENST00000523204 MIER1Q8N108 512 aa17.45■□□□□ 0.38
AP3B1-208ENST00000523204 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
AP3B1-208ENST00000523204 FKBP8Q14318 412 aa17.42■□□□□ 0.38
AP3B1-208ENST00000523204 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
AP3B1-208ENST00000523204 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
AP3B1-208ENST00000523204 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
AP3B1-208ENST00000523204 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
AP3B1-208ENST00000523204 PLCD3Q8N3E9 789 aa17.33■□□□□ 0.36
AP3B1-208ENST00000523204 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
AP3B1-208ENST00000523204 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
AP3B1-208ENST00000523204 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
AP3B1-208ENST00000523204 MS4A3Q96HJ5 214 aa17.28■□□□□ 0.36
AP3B1-208ENST00000523204 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
AP3B1-208ENST00000523204 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
AP3B1-208ENST00000523204 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
AP3B1-208ENST00000523204 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
AP3B1-208ENST00000523204 WDR62O43379 1518 aa17.19■□□□□ 0.34
AP3B1-208ENST00000523204 KIF12Q96FN5 646 aa17.16■□□□□ 0.34
AP3B1-208ENST00000523204 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
AP3B1-208ENST00000523204 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
AP3B1-208ENST00000523204 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
AP3B1-208ENST00000523204 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
AP3B1-208ENST00000523204 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
AP3B1-208ENST00000523204 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
AP3B1-208ENST00000523204 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
AP3B1-208ENST00000523204 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
AP3B1-208ENST00000523204 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
AP3B1-208ENST00000523204 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
AP3B1-208ENST00000523204 MAP3K13O43283 966 aa17.06■□□□□ 0.32
AP3B1-208ENST00000523204 NUBP1P53384 320 aa17.06■□□□□ 0.32
AP3B1-208ENST00000523204 SLC39A7Q92504 469 aa17.04■□□□□ 0.32
AP3B1-208ENST00000523204 METRNQ9UJH8 293 aa17.03■□□□□ 0.32
AP3B1-208ENST00000523204 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
AP3B1-208ENST00000523204 C7P10643 843 aa17.01■□□□□ 0.31
AP3B1-208ENST00000523204 POTEB2H3BUK9 544 aa17■□□□□ 0.31
AP3B1-208ENST00000523204 FAM212AQ96EL1 285 aa17■□□□□ 0.31
AP3B1-208ENST00000523204 ARHGEF11O15085 1522 aa17■□□□□ 0.31
AP3B1-208ENST00000523204 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
AP3B1-208ENST00000523204 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
AP3B1-208ENST00000523204 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
AP3B1-208ENST00000523204 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
AP3B1-208ENST00000523204 TRPC6Q9Y210 931 aa16.97■□□□□ 0.31
AP3B1-208ENST00000523204 TIE1P35590 1138 aa16.95■□□□□ 0.3
AP3B1-208ENST00000523204 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
AP3B1-208ENST00000523204 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
AP3B1-208ENST00000523204 PCDHB13Q9Y5F0 798 aa16.93■□□□□ 0.3
AP3B1-208ENST00000523204 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
AP3B1-208ENST00000523204 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
AP3B1-208ENST00000523204 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
AP3B1-208ENST00000523204 DCAF8Q5TAQ9 597 aa16.83■□□□□ 0.28
AP3B1-208ENST00000523204 IFNL1Q8IU54 200 aa16.81■□□□□ 0.28
AP3B1-208ENST00000523204 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
AP3B1-208ENST00000523204 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
AP3B1-208ENST00000523204 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
AP3B1-208ENST00000523204 MAMSTRQ6ZN01 415 aa16.78■□□□□ 0.28
AP3B1-208ENST00000523204 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
AP3B1-208ENST00000523204 CFTRP13569 1480 aa16.77■□□□□ 0.28
AP3B1-208ENST00000523204 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
AP3B1-208ENST00000523204 PYGBP11216 843 aa16.74■□□□□ 0.27
AP3B1-208ENST00000523204 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
AP3B1-208ENST00000523204 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
AP3B1-208ENST00000523204 SEC24BO95487 1268 aa16.72■□□□□ 0.27
AP3B1-208ENST00000523204 TMEM106CQ9BVX2 250 aa16.71■□□□□ 0.27
AP3B1-208ENST00000523204 SCUBE2Q9NQ36 999 aa16.71■□□□□ 0.27
AP3B1-208ENST00000523204 WIZO95785 1651 aa16.71■□□□□ 0.27
AP3B1-208ENST00000523204 IER5LQ5T953 404 aa16.7■□□□□ 0.26
AP3B1-208ENST00000523204 GSE1Q14687 1217 aa16.67■□□□□ 0.26
AP3B1-208ENST00000523204 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
AP3B1-208ENST00000523204 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
AP3B1-208ENST00000523204 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
AP3B1-208ENST00000523204 PCDHB8Q9UN66 801 aa16.59■□□□□ 0.25
AP3B1-208ENST00000523204 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
AP3B1-208ENST00000523204 CHD1O14646 1710 aa16.56■□□□□ 0.24
AP3B1-208ENST00000523204 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
AP3B1-208ENST00000523204 PLCG2P16885 1265 aa16.53■□□□□ 0.24
AP3B1-208ENST00000523204 ZNF467Q7Z7K2 595 aaPredicted RBP16.52■□□□□ 0.24
AP3B1-208ENST00000523204 IFNLR1Q8IU57 520 aaPredicted RBP16.52■□□□□ 0.24
AP3B1-208ENST00000523204 SPOCK2Q92563 424 aa16.52■□□□□ 0.24
AP3B1-208ENST00000523204 CHRM1P11229 460 aaPredicted RBP16.49■□□□□ 0.23
AP3B1-208ENST00000523204 POTEMA6NI47 508 aa16.48■□□□□ 0.23
AP3B1-208ENST00000523204 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms