RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
HMBOX1-209ENST00000522468 CUL7Q14999 1698 aa24.74■■□□□ 1.55
HMBOX1-209ENST00000522468 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
HMBOX1-209ENST00000522468 KIF13AQ9H1H9 1805 aa24.65■■□□□ 1.54
HMBOX1-209ENST00000522468 ADCY10Q96PN6 1610 aa24.57■■□□□ 1.52
HMBOX1-209ENST00000522468 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
HMBOX1-209ENST00000522468 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
HMBOX1-209ENST00000522468 ABCC10Q5T3U5 1492 aa24.48■■□□□ 1.51
HMBOX1-209ENST00000522468 IQGAP2Q13576 1575 aa24.45■■□□□ 1.5
HMBOX1-209ENST00000522468 DIP2BQ9P265 1576 aa24.45■■□□□ 1.5
HMBOX1-209ENST00000522468 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.49
HMBOX1-209ENST00000522468 PTPRGP23470 1445 aa24.38■■□□□ 1.49
HMBOX1-209ENST00000522468 CARMIL2Q6F5E8 1435 aa24.36■■□□□ 1.49
HMBOX1-209ENST00000522468 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
HMBOX1-209ENST00000522468 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
HMBOX1-209ENST00000522468 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
HMBOX1-209ENST00000522468 DISP1Q96F81 1524 aa24.35■■□□□ 1.49
HMBOX1-209ENST00000522468 UGGT2Q9NYU1 1516 aa24.32■■□□□ 1.48
HMBOX1-209ENST00000522468 ABCC2Q92887 1545 aa24.31■■□□□ 1.48
HMBOX1-209ENST00000522468 UHRF1BP1LA0JNW5 1464 aa24.29■■□□□ 1.48
HMBOX1-209ENST00000522468 KIAA0556O60303 1618 aa24.24■■□□□ 1.47
HMBOX1-209ENST00000522468 UACAQ9BZF9 1416 aa24.23■■□□□ 1.47
HMBOX1-209ENST00000522468 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
HMBOX1-209ENST00000522468 CTTNBP2Q8WZ74 1663 aa24.22■■□□□ 1.47
HMBOX1-209ENST00000522468 TTBK1Q5TCY1 1321 aaPredicted RBP24.21■■□□□ 1.47
HMBOX1-209ENST00000522468 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
HMBOX1-209ENST00000522468 ASXL2Q76L83 1435 aa24.19■■□□□ 1.46
HMBOX1-209ENST00000522468 GLI2P10070 1586 aa24.19■■□□□ 1.46
HMBOX1-209ENST00000522468 KDM5BQ9UGL1 1544 aa24.19■■□□□ 1.46
HMBOX1-209ENST00000522468 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
HMBOX1-209ENST00000522468 KDM6BO15054 1643 aa24.18■■□□□ 1.46
HMBOX1-209ENST00000522468 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
HMBOX1-209ENST00000522468 PPRC1Q5VV67 1664 aaKnown RBP24.17■■□□□ 1.46
HMBOX1-209ENST00000522468 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
HMBOX1-209ENST00000522468 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
HMBOX1-209ENST00000522468 MAP3K4Q9Y6R4 1608 aa24.07■■□□□ 1.44
HMBOX1-209ENST00000522468 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
HMBOX1-209ENST00000522468 ABCA8O94911 1581 aa24.03■■□□□ 1.44
HMBOX1-209ENST00000522468 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
HMBOX1-209ENST00000522468 COL17A1Q9UMD9 1497 aaPredicted RBP23.96■■□□□ 1.43
HMBOX1-209ENST00000522468 KDM4FA0A1W2PPD8 638 aa23.92■■□□□ 1.42
HMBOX1-209ENST00000522468 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
HMBOX1-209ENST00000522468 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
HMBOX1-209ENST00000522468 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
HMBOX1-209ENST00000522468 CFAP43Q8NDM7 1665 aa23.88■■□□□ 1.41
HMBOX1-209ENST00000522468 MAGI3Q5TCQ9 1506 aa23.84■■□□□ 1.41
HMBOX1-209ENST00000522468 EEA1Q15075 1411 aa23.84■■□□□ 1.41
HMBOX1-209ENST00000522468 ATP10BO94823 1461 aa23.8■■□□□ 1.4
HMBOX1-209ENST00000522468 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
HMBOX1-209ENST00000522468 P3H3Q8IVL6 736 aa23.77■■□□□ 1.4
HMBOX1-209ENST00000522468 RAPGEF6Q8TEU7 1601 aa23.75■■□□□ 1.39
HMBOX1-209ENST00000522468 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
HMBOX1-209ENST00000522468 ADGRL1O94910 1474 aa23.74■■□□□ 1.39
HMBOX1-209ENST00000522468 KIF21BO75037 1637 aa23.71■■□□□ 1.39
HMBOX1-209ENST00000522468 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
HMBOX1-209ENST00000522468 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
HMBOX1-209ENST00000522468 ARID3CA6NKF2 412 aa23.67■■□□□ 1.38
HMBOX1-209ENST00000522468 ARAP3Q8WWN8 1544 aa23.66■■□□□ 1.38
HMBOX1-209ENST00000522468 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
HMBOX1-209ENST00000522468 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
HMBOX1-209ENST00000522468 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
HMBOX1-209ENST00000522468 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
HMBOX1-209ENST00000522468 NEO1Q92859 1461 aa23.55■■□□□ 1.36
HMBOX1-209ENST00000522468 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
HMBOX1-209ENST00000522468 FRMPD1Q5SYB0 1578 aa23.5■■□□□ 1.35
HMBOX1-209ENST00000522468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
HMBOX1-209ENST00000522468 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
HMBOX1-209ENST00000522468 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
HMBOX1-209ENST00000522468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.45■■□□□ 1.34
HMBOX1-209ENST00000522468 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
HMBOX1-209ENST00000522468 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
HMBOX1-209ENST00000522468 RAPGEF3O95398 923 aa23.43■■□□□ 1.34
HMBOX1-209ENST00000522468 CDK13Q14004 1512 aaKnown RBP23.43■■□□□ 1.34
HMBOX1-209ENST00000522468 HECW2Q9P2P5 1572 aa23.42■■□□□ 1.34
HMBOX1-209ENST00000522468 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
HMBOX1-209ENST00000522468 RICTORQ6R327 1708 aa23.41■■□□□ 1.34
HMBOX1-209ENST00000522468 ADAMTSL3P82987 1691 aa23.4■■□□□ 1.34
HMBOX1-209ENST00000522468 CFAP74Q9C0B2 1584 aa23.39■■□□□ 1.33
HMBOX1-209ENST00000522468 FANCAO15360 1455 aa23.36■■□□□ 1.33
HMBOX1-209ENST00000522468 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
HMBOX1-209ENST00000522468 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
HMBOX1-209ENST00000522468 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
HMBOX1-209ENST00000522468 HECW1Q76N89 1606 aa23.36■■□□□ 1.33
HMBOX1-209ENST00000522468 ARHGEF40Q8TER5 1519 aa23.34■■□□□ 1.33
HMBOX1-209ENST00000522468 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
HMBOX1-209ENST00000522468 BCORL1Q5H9F3 1711 aa23.33■■□□□ 1.33
HMBOX1-209ENST00000522468 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
HMBOX1-209ENST00000522468 ZMYM4Q5VZL5 1548 aa23.32■■□□□ 1.32
HMBOX1-209ENST00000522468 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
HMBOX1-209ENST00000522468 PLCH2O75038 1416 aa23.28■■□□□ 1.32
HMBOX1-209ENST00000522468 PTPRMP28827 1452 aa23.28■■□□□ 1.32
HMBOX1-209ENST00000522468 MADDQ8WXG6 1647 aa23.26■■□□□ 1.31
HMBOX1-209ENST00000522468 KIF14Q15058 1648 aa23.26■■□□□ 1.31
HMBOX1-209ENST00000522468 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
HMBOX1-209ENST00000522468 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
HMBOX1-209ENST00000522468 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
HMBOX1-209ENST00000522468 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
HMBOX1-209ENST00000522468 YEATS2Q9ULM3 1422 aa23.21■■□□□ 1.31
HMBOX1-209ENST00000522468 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
HMBOX1-209ENST00000522468 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms