RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 CUL7Q14999 1698 aa31.88■■■□□ 2.69
TOP1MT-216ENST00000522121 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
TOP1MT-216ENST00000522121 KIAA0586Q9BVV6 1533 aa31.8■■■□□ 2.68
TOP1MT-216ENST00000522121 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
TOP1MT-216ENST00000522121 NPM1P06748 294 aaKnown RBP eCLIP31.6■■■□□ 2.65
TOP1MT-216ENST00000522121 CARMIL2Q6F5E8 1435 aa31.52■■■□□ 2.64
TOP1MT-216ENST00000522121 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
TOP1MT-216ENST00000522121 IQGAP2Q13576 1575 aa31.5■■■□□ 2.63
TOP1MT-216ENST00000522121 PTPRGP23470 1445 aa31.49■■■□□ 2.63
TOP1MT-216ENST00000522121 ADCY10Q96PN6 1610 aa31.46■■■□□ 2.63
TOP1MT-216ENST00000522121 TNIKQ9UKE5 1360 aa31.44■■■□□ 2.62
TOP1MT-216ENST00000522121 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
TOP1MT-216ENST00000522121 MAPKBP1O60336 1514 aa31.42■■■□□ 2.62
TOP1MT-216ENST00000522121 FAM69CQ0P6D2 419 aa31.38■■■□□ 2.61
TOP1MT-216ENST00000522121 ABCC10Q5T3U5 1492 aa31.37■■■□□ 2.61
TOP1MT-216ENST00000522121 KIF13AQ9H1H9 1805 aa31.37■■■□□ 2.61
TOP1MT-216ENST00000522121 DISP1Q96F81 1524 aa31.32■■■□□ 2.6
TOP1MT-216ENST00000522121 UGGT2Q9NYU1 1516 aa31.3■■■□□ 2.6
TOP1MT-216ENST00000522121 DIP2BQ9P265 1576 aa31.26■■■□□ 2.59
TOP1MT-216ENST00000522121 ABCC2Q92887 1545 aa31.25■■■□□ 2.59
TOP1MT-216ENST00000522121 UACAQ9BZF9 1416 aa31.24■■■□□ 2.59
TOP1MT-216ENST00000522121 UHRF1BP1LA0JNW5 1464 aa31.22■■■□□ 2.59
TOP1MT-216ENST00000522121 PRXQ9BXM0 1461 aa31.22■■■□□ 2.59
TOP1MT-216ENST00000522121 KIAA0556O60303 1618 aa31.19■■■□□ 2.58
TOP1MT-216ENST00000522121 CTTNBP2Q8WZ74 1663 aa31.17■■■□□ 2.58
TOP1MT-216ENST00000522121 GOLGA3Q08378 1498 aa31.14■■■□□ 2.57
TOP1MT-216ENST00000522121 ASXL2Q76L83 1435 aa31.13■■■□□ 2.57
TOP1MT-216ENST00000522121 PLB1Q6P1J6 1458 aa31.13■■■□□ 2.57
TOP1MT-216ENST00000522121 CSRNP3Q8WYN3 585 aa31.1■■■□□ 2.57
TOP1MT-216ENST00000522121 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
TOP1MT-216ENST00000522121 KDM5BQ9UGL1 1544 aa31.07■■■□□ 2.56
TOP1MT-216ENST00000522121 EEA1Q15075 1411 aa31.01■■■□□ 2.55
TOP1MT-216ENST00000522121 TSPOAP1O95153 1857 aa30.99■■■□□ 2.55
TOP1MT-216ENST00000522121 GLI2P10070 1586 aa30.98■■■□□ 2.55
TOP1MT-216ENST00000522121 FAM9AQ8IZU1 332 aaPredicted RBP30.98■■■□□ 2.55
TOP1MT-216ENST00000522121 ZCCHC11Q5TAX3 1644 aaKnown RBP30.96■■■□□ 2.55
TOP1MT-216ENST00000522121 KDM6BO15054 1643 aa30.95■■■□□ 2.55
TOP1MT-216ENST00000522121 EPRSP07814 1512 aaKnown RBP30.93■■■□□ 2.54
TOP1MT-216ENST00000522121 ABCA8O94911 1581 aa30.88■■■□□ 2.53
TOP1MT-216ENST00000522121 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
TOP1MT-216ENST00000522121 WDR7Q9Y4E6 1490 aa30.86■■■□□ 2.53
TOP1MT-216ENST00000522121 PPRC1Q5VV67 1664 aaKnown RBP30.8■■■□□ 2.52
TOP1MT-216ENST00000522121 MAP3K4Q9Y6R4 1608 aa30.8■■■□□ 2.52
TOP1MT-216ENST00000522121 TEX14Q8IWB6 1497 aa30.78■■■□□ 2.52
TOP1MT-216ENST00000522121 SAMD9Q5K651 1589 aa30.75■■■□□ 2.51
TOP1MT-216ENST00000522121 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
TOP1MT-216ENST00000522121 RANGAP1P46060 587 aaPredicted RBP30.72■■■□□ 2.51
TOP1MT-216ENST00000522121 ARID3CA6NKF2 412 aa30.7■■■□□ 2.51
TOP1MT-216ENST00000522121 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
TOP1MT-216ENST00000522121 CD109Q6YHK3 1445 aa30.67■■■□□ 2.5
TOP1MT-216ENST00000522121 KIF21BO75037 1637 aa30.67■■■□□ 2.5
TOP1MT-216ENST00000522121 ATP10BO94823 1461 aa30.66■■■□□ 2.5
TOP1MT-216ENST00000522121 COL17A1Q9UMD9 1497 aaPredicted RBP30.63■■■□□ 2.49
TOP1MT-216ENST00000522121 CFAP43Q8NDM7 1665 aa30.62■■■□□ 2.49
TOP1MT-216ENST00000522121 MAGI3Q5TCQ9 1506 aa30.61■■■□□ 2.49
TOP1MT-216ENST00000522121 RAPGEF6Q8TEU7 1601 aa30.61■■■□□ 2.49
TOP1MT-216ENST00000522121 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
TOP1MT-216ENST00000522121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.59■■■□□ 2.49
TOP1MT-216ENST00000522121 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
TOP1MT-216ENST00000522121 KDM4FA0A1W2PPD8 638 aa30.55■■■□□ 2.48
TOP1MT-216ENST00000522121 EFCAB5A4FU69 1503 aa30.54■■■□□ 2.48
TOP1MT-216ENST00000522121 UBTFP17480 764 aaKnown RBP30.54■■■□□ 2.48
TOP1MT-216ENST00000522121 EHMT2Q96KQ7 1210 aa30.52■■■□□ 2.48
TOP1MT-216ENST00000522121 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
TOP1MT-216ENST00000522121 ABCA9Q8IUA7 1624 aa30.43■■■□□ 2.46
TOP1MT-216ENST00000522121 PLEKHD1A6NEE1 506 aa30.42■■■□□ 2.46
TOP1MT-216ENST00000522121 PHLDB1Q86UU1 1377 aa30.39■■■□□ 2.45
TOP1MT-216ENST00000522121 ADGRL1O94910 1474 aa30.37■■■□□ 2.45
TOP1MT-216ENST00000522121 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
TOP1MT-216ENST00000522121 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
TOP1MT-216ENST00000522121 NEO1Q92859 1461 aa30.3■■■□□ 2.44
TOP1MT-216ENST00000522121 ARHGAP35Q9NRY4 1499 aa30.28■■■□□ 2.44
TOP1MT-216ENST00000522121 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
TOP1MT-216ENST00000522121 CDK13Q14004 1512 aaKnown RBP30.22■■■□□ 2.43
TOP1MT-216ENST00000522121 RAPGEF3O95398 923 aa30.21■■■□□ 2.43
TOP1MT-216ENST00000522121 HECW1Q76N89 1606 aa30.19■■■□□ 2.42
TOP1MT-216ENST00000522121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.18■■■□□ 2.42
TOP1MT-216ENST00000522121 CDK11AQ9UQ88 783 aaPredicted RBP30.17■■■□□ 2.42
TOP1MT-216ENST00000522121 FANCAO15360 1455 aa30.13■■■□□ 2.41
TOP1MT-216ENST00000522121 AKNAQ7Z591 1439 aa30.13■■■□□ 2.41
TOP1MT-216ENST00000522121 TTC37Q6PGP7 1564 aa30.11■■■□□ 2.41
TOP1MT-216ENST00000522121 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
TOP1MT-216ENST00000522121 DENND4BO75064 1496 aaPredicted RBP30.1■■■□□ 2.41
TOP1MT-216ENST00000522121 FRMPD1Q5SYB0 1578 aa30.07■■■□□ 2.4
TOP1MT-216ENST00000522121 PLCH2O75038 1416 aa30.04■■■□□ 2.4
TOP1MT-216ENST00000522121 CLIP1P30622 1438 aa30■■■□□ 2.39
TOP1MT-216ENST00000522121 TROQ12816 1431 aaPredicted RBP30■■■□□ 2.39
TOP1MT-216ENST00000522121 ARID4BQ4LE39 1312 aaPredicted RBP29.98■■■□□ 2.39
TOP1MT-216ENST00000522121 CASKIN1Q8WXD9 1431 aa29.97■■■□□ 2.39
TOP1MT-216ENST00000522121 EFCAB2Q5VUJ9 269 aa29.97■■■□□ 2.39
TOP1MT-216ENST00000522121 KIF14Q15058 1648 aa29.96■■■□□ 2.39
TOP1MT-216ENST00000522121 RICTORQ6R327 1708 aa29.96■■■□□ 2.39
TOP1MT-216ENST00000522121 CCDC18Q5T9S5 1454 aa29.94■■■□□ 2.38
TOP1MT-216ENST00000522121 SCAPERQ9BY12 1400 aa29.94■■■□□ 2.38
TOP1MT-216ENST00000522121 ARHGEF40Q8TER5 1519 aa29.93■■■□□ 2.38
TOP1MT-216ENST00000522121 PCF11O94913 1555 aaKnown RBP29.92■■■□□ 2.38
TOP1MT-216ENST00000522121 ZMYM4Q5VZL5 1548 aa29.91■■■□□ 2.38
TOP1MT-216ENST00000522121 MYO5CQ9NQX4 1742 aa29.91■■■□□ 2.38
TOP1MT-216ENST00000522121 MAGI2Q86UL8 1455 aa29.89■■■□□ 2.38
TOP1MT-216ENST00000522121 LRRIQ1Q96JM4 1722 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms