RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
CTNNA1-233ENST00000522052 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
CTNNA1-233ENST00000522052 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
CTNNA1-233ENST00000522052 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-233ENST00000522052 AKT1S1Q96B36 256 aa10.95□□□□□ -0.66
CTNNA1-233ENST00000522052 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-233ENST00000522052 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
CTNNA1-233ENST00000522052 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
CTNNA1-233ENST00000522052 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
CTNNA1-233ENST00000522052 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-233ENST00000522052 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-233ENST00000522052 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
CTNNA1-233ENST00000522052 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-233ENST00000522052 POTEHQ6S545 545 aa10.88□□□□□ -0.67
CTNNA1-233ENST00000522052 VGFO15240 615 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-233ENST00000522052 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-233ENST00000522052 NBR1Q14596 966 aa10.85□□□□□ -0.67
CTNNA1-233ENST00000522052 STK25O00506 426 aa10.84□□□□□ -0.67
CTNNA1-233ENST00000522052 REM2Q8IYK8 340 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-233ENST00000522052 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
CTNNA1-233ENST00000522052 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
CTNNA1-233ENST00000522052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-233ENST00000522052 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-233ENST00000522052 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-233ENST00000522052 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-233ENST00000522052 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
CTNNA1-233ENST00000522052 PYGBP11216 843 aa10.73□□□□□ -0.69
CTNNA1-233ENST00000522052 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
CTNNA1-233ENST00000522052 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-233ENST00000522052 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-233ENST00000522052 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
CTNNA1-233ENST00000522052 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-233ENST00000522052 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
CTNNA1-233ENST00000522052 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-233ENST00000522052 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
CTNNA1-233ENST00000522052 WDR70Q9NW82 654 aa10.51□□□□□ -0.73
CTNNA1-233ENST00000522052 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-233ENST00000522052 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
CTNNA1-233ENST00000522052 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
CTNNA1-233ENST00000522052 CCDC61Q9Y6R9 512 aa10.49□□□□□ -0.73
CTNNA1-233ENST00000522052 PSEN1P49768 467 aa10.48□□□□□ -0.73
CTNNA1-233ENST00000522052 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
CTNNA1-233ENST00000522052 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.73
CTNNA1-233ENST00000522052 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-233ENST00000522052 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-233ENST00000522052 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.751e-6■■□□□ 12.9
CTNNA1-233ENST00000522052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNNA1-233ENST00000522052 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
CTNNA1-233ENST00000522052 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
CTNNA1-233ENST00000522052 NLRP6P59044 892 aa10.37□□□□□ -0.75
CTNNA1-233ENST00000522052 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
CTNNA1-233ENST00000522052 SOX12O15370 315 aa10.36□□□□□ -0.75
CTNNA1-233ENST00000522052 PPP1R37O75864 691 aa10.36□□□□□ -0.75
CTNNA1-233ENST00000522052 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
CTNNA1-233ENST00000522052 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-233ENST00000522052 MAP3K13O43283 966 aa10.34□□□□□ -0.75
CTNNA1-233ENST00000522052 KIF12Q96FN5 646 aa10.34□□□□□ -0.75
CTNNA1-233ENST00000522052 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
CTNNA1-233ENST00000522052 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-233ENST00000522052 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
CTNNA1-233ENST00000522052 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
CTNNA1-233ENST00000522052 E2F4Q16254 413 aa10.32□□□□□ -0.76
CTNNA1-233ENST00000522052 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
CTNNA1-233ENST00000522052 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
CTNNA1-233ENST00000522052 TESPA1A2RU30 521 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-233ENST00000522052 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
CTNNA1-233ENST00000522052 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
CTNNA1-233ENST00000522052 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
CTNNA1-233ENST00000522052 SEMA3EO15041 775 aa10.22□□□□□ -0.77
CTNNA1-233ENST00000522052 PDE4AP27815 886 aa10.22□□□□□ -0.77
CTNNA1-233ENST00000522052 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
CTNNA1-233ENST00000522052 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-233ENST00000522052 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
CTNNA1-233ENST00000522052 MFSD10Q14728 455 aa10.21□□□□□ -0.77
CTNNA1-233ENST00000522052 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
CTNNA1-233ENST00000522052 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-233ENST00000522052 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-233ENST00000522052 PHF12Q96QT6 1004 aa10.18□□□□□ -0.78
CTNNA1-233ENST00000522052 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
CTNNA1-233ENST00000522052 BRPF1P55201 1214 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-233ENST00000522052 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-233ENST00000522052 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
CTNNA1-233ENST00000522052 SMYD5Q6GMV2 418 aa10.16□□□□□ -0.78
CTNNA1-233ENST00000522052 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-233ENST00000522052 TMEM106CQ9BVX2 250 aa10.15□□□□□ -0.78
CTNNA1-233ENST00000522052 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
CTNNA1-233ENST00000522052 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
CTNNA1-233ENST00000522052 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-233ENST00000522052 ZMYND10O75800 440 aa10.1□□□□□ -0.79
CTNNA1-233ENST00000522052 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
CTNNA1-233ENST00000522052 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
CTNNA1-233ENST00000522052 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
CTNNA1-233ENST00000522052 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-233ENST00000522052 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
CTNNA1-233ENST00000522052 TIE1P35590 1138 aa10.03□□□□□ -0.8
CTNNA1-233ENST00000522052 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
CTNNA1-233ENST00000522052 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-233ENST00000522052 PPP1R15BQ5SWA1 713 aa10.02□□□□□ -0.81
CTNNA1-233ENST00000522052 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-233ENST00000522052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.814e-8■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms