RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 IGF1RP08069 1367 aa36.35■■■■□ 3.41
PABPC1-218ENST00000521865 KIAA0586Q9BVV6 1533 aa36.23■■■■□ 3.39
PABPC1-218ENST00000521865 NPM1P06748 294 aaKnown RBP eCLIP36.22■■■■□ 3.39
PABPC1-218ENST00000521865 CUL7Q14999 1698 aa36.21■■■■□ 3.39
PABPC1-218ENST00000521865 CARMIL1Q5VZK9 1371 aa36.15■■■■□ 3.38
PABPC1-218ENST00000521865 AEBP2Q6ZN18 517 aaPredicted RBP36.14■■■■□ 3.38
PABPC1-218ENST00000521865 FAM69CQ0P6D2 419 aa36.06■■■■□ 3.36
PABPC1-218ENST00000521865 TTBK1Q5TCY1 1321 aaPredicted RBP36.02■■■■□ 3.36
PABPC1-218ENST00000521865 ADCY10Q96PN6 1610 aa36■■■■□ 3.35
PABPC1-218ENST00000521865 KIF13AQ9H1H9 1805 aa35.99■■■■□ 3.35
PABPC1-218ENST00000521865 ABCC10Q5T3U5 1492 aa35.99■■■■□ 3.35
PABPC1-218ENST00000521865 MAPKBP1O60336 1514 aa35.97■■■■□ 3.35
PABPC1-218ENST00000521865 PTPRGP23470 1445 aa35.96■■■■□ 3.35
PABPC1-218ENST00000521865 CARMIL2Q6F5E8 1435 aa35.93■■■■□ 3.34
PABPC1-218ENST00000521865 TNIKQ9UKE5 1360 aa35.87■■■■□ 3.33
PABPC1-218ENST00000521865 IQGAP2Q13576 1575 aa35.85■■■■□ 3.33
PABPC1-218ENST00000521865 DIP2BQ9P265 1576 aa35.85■■■■□ 3.33
PABPC1-218ENST00000521865 RAPGEF2Q9Y4G8 1499 aa35.79■■■■□ 3.32
PABPC1-218ENST00000521865 ABCC2Q92887 1545 aa35.71■■■■□ 3.31
PABPC1-218ENST00000521865 DISP1Q96F81 1524 aa35.68■■■■□ 3.3
PABPC1-218ENST00000521865 UACAQ9BZF9 1416 aa35.66■■■■□ 3.3
PABPC1-218ENST00000521865 ASXL2Q76L83 1435 aa35.62■■■■□ 3.29
PABPC1-218ENST00000521865 UHRF1BP1LA0JNW5 1464 aa35.61■■■■□ 3.29
PABPC1-218ENST00000521865 UGGT2Q9NYU1 1516 aa35.61■■■■□ 3.29
PABPC1-218ENST00000521865 KDM6BO15054 1643 aa35.59■■■■□ 3.29
PABPC1-218ENST00000521865 PLB1Q6P1J6 1458 aa35.59■■■■□ 3.29
PABPC1-218ENST00000521865 TSPOAP1O95153 1857 aa35.58■■■■□ 3.29
PABPC1-218ENST00000521865 KIAA0556O60303 1618 aa35.52■■■■□ 3.28
PABPC1-218ENST00000521865 KDM5BQ9UGL1 1544 aa35.45■■■■□ 3.27
PABPC1-218ENST00000521865 GLI2P10070 1586 aa35.43■■■■□ 3.26
PABPC1-218ENST00000521865 GOLGA3Q08378 1498 aa35.39■■■■□ 3.26
PABPC1-218ENST00000521865 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
PABPC1-218ENST00000521865 CTTNBP2Q8WZ74 1663 aa35.37■■■■□ 3.25
PABPC1-218ENST00000521865 PRXQ9BXM0 1461 aa35.37■■■■□ 3.25
PABPC1-218ENST00000521865 ZCCHC11Q5TAX3 1644 aaKnown RBP35.35■■■■□ 3.25
PABPC1-218ENST00000521865 PPRC1Q5VV67 1664 aaKnown RBP35.28■■■■□ 3.24
PABPC1-218ENST00000521865 KDM4FA0A1W2PPD8 638 aa35.28■■■■□ 3.24
PABPC1-218ENST00000521865 WDR7Q9Y4E6 1490 aa35.26■■■■□ 3.23
PABPC1-218ENST00000521865 FAM9AQ8IZU1 332 aaPredicted RBP35.24■■■■□ 3.23
PABPC1-218ENST00000521865 TEX14Q8IWB6 1497 aa35.23■■■■□ 3.23
PABPC1-218ENST00000521865 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
PABPC1-218ENST00000521865 CSRNP3Q8WYN3 585 aa35.19■■■■□ 3.22
PABPC1-218ENST00000521865 KCNH8Q96L42 1107 aa35.19■■■■□ 3.22
PABPC1-218ENST00000521865 P3H3Q8IVL6 736 aa35.18■■■■□ 3.22
PABPC1-218ENST00000521865 ABCA8O94911 1581 aa35.17■■■■□ 3.22
PABPC1-218ENST00000521865 COL17A1Q9UMD9 1497 aaPredicted RBP35.16■■■■□ 3.22
PABPC1-218ENST00000521865 ARID3CA6NKF2 412 aa35.11■■■■□ 3.21
PABPC1-218ENST00000521865 CD109Q6YHK3 1445 aa35.08■■■■□ 3.21
PABPC1-218ENST00000521865 ADGRL1O94910 1474 aa34.99■■■■□ 3.19
PABPC1-218ENST00000521865 RANGAP1P46060 587 aaPredicted RBP34.99■■■■□ 3.19
PABPC1-218ENST00000521865 MAGI3Q5TCQ9 1506 aa34.98■■■■□ 3.19
PABPC1-218ENST00000521865 EEA1Q15075 1411 aa34.98■■■■□ 3.19
PABPC1-218ENST00000521865 CFAP43Q8NDM7 1665 aa34.96■■■■□ 3.19
PABPC1-218ENST00000521865 ATP10BO94823 1461 aa34.94■■■■□ 3.18
PABPC1-218ENST00000521865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.92■■■■□ 3.18
PABPC1-218ENST00000521865 HNRNPUL2Q1KMD3 747 aaKnown RBP34.92■■■■□ 3.18
PABPC1-218ENST00000521865 SAMD9Q5K651 1589 aa34.9■■■■□ 3.18
PABPC1-218ENST00000521865 RAPGEF6Q8TEU7 1601 aa34.81■■■■□ 3.16
PABPC1-218ENST00000521865 FHOD3Q2V2M9 1422 aa34.79■■■■□ 3.16
PABPC1-218ENST00000521865 NUP153P49790 1475 aaKnown RBP34.71■■■■□ 3.15
PABPC1-218ENST00000521865 ARAP3Q8WWN8 1544 aa34.71■■■■□ 3.15
PABPC1-218ENST00000521865 ABCA9Q8IUA7 1624 aa34.7■■■■□ 3.14
PABPC1-218ENST00000521865 PHLDB1Q86UU1 1377 aa34.68■■■■□ 3.14
PABPC1-218ENST00000521865 EHMT2Q96KQ7 1210 aa34.66■■■■□ 3.14
PABPC1-218ENST00000521865 PLEKHD1A6NEE1 506 aa34.64■■■■□ 3.14
PABPC1-218ENST00000521865 KIF21BO75037 1637 aa34.63■■■■□ 3.13
PABPC1-218ENST00000521865 RAPGEF3O95398 923 aa34.61■■■■□ 3.13
PABPC1-218ENST00000521865 EFCAB5A4FU69 1503 aa34.6■■■■□ 3.13
PABPC1-218ENST00000521865 NEO1Q92859 1461 aa34.59■■■■□ 3.13
PABPC1-218ENST00000521865 UBTFP17480 764 aaKnown RBP34.59■■■■□ 3.13
PABPC1-218ENST00000521865 CHIC1Q5VXU3 224 aa34.49■■■■□ 3.11
PABPC1-218ENST00000521865 HECW2Q9P2P5 1572 aa34.48■■■■□ 3.11
PABPC1-218ENST00000521865 ATP1B4Q9UN42 357 aaPredicted RBP34.47■■■■□ 3.11
PABPC1-218ENST00000521865 ARID4BQ4LE39 1312 aaPredicted RBP34.43■■■■□ 3.1
PABPC1-218ENST00000521865 CDK13Q14004 1512 aaKnown RBP34.4■■■■□ 3.1
PABPC1-218ENST00000521865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.39■■■■□ 3.17e-8■□□□□ 10.3
PABPC1-218ENST00000521865 FANCAO15360 1455 aa34.39■■■■□ 3.1
PABPC1-218ENST00000521865 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
PABPC1-218ENST00000521865 AKNAQ7Z591 1439 aa34.38■■■■□ 3.09
PABPC1-218ENST00000521865 FRMPD1Q5SYB0 1578 aa34.37■■■■□ 3.09
PABPC1-218ENST00000521865 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
PABPC1-218ENST00000521865 TTC37Q6PGP7 1564 aa34.32■■■■□ 3.09
PABPC1-218ENST00000521865 ARHGAP35Q9NRY4 1499 aa34.31■■■■□ 3.08
PABPC1-218ENST00000521865 CFAP74Q9C0B2 1584 aa34.31■■■■□ 3.08
PABPC1-218ENST00000521865 PTPRMP28827 1452 aa34.28■■■■□ 3.08
PABPC1-218ENST00000521865 CDK11AQ9UQ88 783 aaPredicted RBP34.28■■■■□ 3.08
PABPC1-218ENST00000521865 ILDR1Q86SU0 546 aaPredicted RBP34.27■■■■□ 3.08
PABPC1-218ENST00000521865 HECW1Q76N89 1606 aa34.26■■■■□ 3.08
PABPC1-218ENST00000521865 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
PABPC1-218ENST00000521865 ARHGEF40Q8TER5 1519 aa34.24■■■■□ 3.07
PABPC1-218ENST00000521865 PLCH2O75038 1416 aa34.21■■■■□ 3.07
PABPC1-218ENST00000521865 RICTORQ6R327 1708 aa34.21■■■■□ 3.07
PABPC1-218ENST00000521865 BCORL1Q5H9F3 1711 aa34.19■■■■□ 3.06
PABPC1-218ENST00000521865 SCAPERQ9BY12 1400 aa34.18■■■■□ 3.06
PABPC1-218ENST00000521865 EFCAB2Q5VUJ9 269 aa34.15■■■■□ 3.06
PABPC1-218ENST00000521865 MADDQ8WXG6 1647 aa34.15■■■■□ 3.06
PABPC1-218ENST00000521865 ZFYVE16Q7Z3T8 1539 aa34.14■■■■□ 3.06
PABPC1-218ENST00000521865 ZMYM4Q5VZL5 1548 aa34.14■■■■□ 3.06
PABPC1-218ENST00000521865 YEATS2Q9ULM3 1422 aa34.13■■■■□ 3.05
PABPC1-218ENST00000521865 POGZQ7Z3K3 1410 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 1018.9 ms