RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 SLC39A7Q92504 469 aa14.73□□□□□ -0.05
RUNX1T1-234ENST00000521553 C7P10643 843 aa14.71□□□□□ -0.05
RUNX1T1-234ENST00000521553 MAMSTRQ6ZN01 415 aa14.71□□□□□ -0.05
RUNX1T1-234ENST00000521553 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
RUNX1T1-234ENST00000521553 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
RUNX1T1-234ENST00000521553 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
RUNX1T1-234ENST00000521553 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
RUNX1T1-234ENST00000521553 SCUBE2Q9NQ36 999 aa14.61□□□□□ -0.07
RUNX1T1-234ENST00000521553 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
RUNX1T1-234ENST00000521553 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
RUNX1T1-234ENST00000521553 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.08
RUNX1T1-234ENST00000521553 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
RUNX1T1-234ENST00000521553 LCE2DQ5TA82 110 aaPredicted RBP14.47□□□□□ -0.09
RUNX1T1-234ENST00000521553 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
RUNX1T1-234ENST00000521553 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
RUNX1T1-234ENST00000521553 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
RUNX1T1-234ENST00000521553 TIE1P35590 1138 aa14.34□□□□□ -0.11
RUNX1T1-234ENST00000521553 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
RUNX1T1-234ENST00000521553 SEC24BO95487 1268 aa14.32□□□□□ -0.12
RUNX1T1-234ENST00000521553 PROM2Q8N271 834 aa14.32□□□□□ -0.12
RUNX1T1-234ENST00000521553 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
RUNX1T1-234ENST00000521553 TRPC6Q9Y210 931 aa14.29□□□□□ -0.12
RUNX1T1-234ENST00000521553 MAP3K13O43283 966 aa14.28□□□□□ -0.12
RUNX1T1-234ENST00000521553 CDAN1Q8IWY9 1227 aa14.26□□□□□ -0.13
RUNX1T1-234ENST00000521553 TTLL13PA6NNM8 815 aa14.22□□□□□ -0.13
RUNX1T1-234ENST00000521553 COLQQ9Y215 455 aaPredicted RBP14.21□□□□□ -0.13
RUNX1T1-234ENST00000521553 IER5LQ5T953 404 aa14.17□□□□□ -0.14
RUNX1T1-234ENST00000521553 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
RUNX1T1-234ENST00000521553 MIER1Q8N108 512 aa14.15□□□□□ -0.14
RUNX1T1-234ENST00000521553 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
RUNX1T1-234ENST00000521553 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
RUNX1T1-234ENST00000521553 SGIP1Q9BQI5 828 aa14.11□□□□□ -0.15
RUNX1T1-234ENST00000521553 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
RUNX1T1-234ENST00000521553 ST18O60284 1047 aa14.07□□□□□ -0.16
RUNX1T1-234ENST00000521553 PLCG2P16885 1265 aa14.03□□□□□ -0.16
RUNX1T1-234ENST00000521553 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
RUNX1T1-234ENST00000521553 TMEM106CQ9BVX2 250 aa13.98□□□□□ -0.17
RUNX1T1-234ENST00000521553 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
RUNX1T1-234ENST00000521553 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
RUNX1T1-234ENST00000521553 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
RUNX1T1-234ENST00000521553 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
RUNX1T1-234ENST00000521553 FKBP8Q14318 412 aa13.92□□□□□ -0.18
RUNX1T1-234ENST00000521553 SNPHO15079 494 aa13.91□□□□□ -0.18
RUNX1T1-234ENST00000521553 SPNS2Q8IVW8 549 aa13.9□□□□□ -0.18
RUNX1T1-234ENST00000521553 FAM212AQ96EL1 285 aa13.9□□□□□ -0.19
RUNX1T1-234ENST00000521553 NUBP1P53384 320 aa13.88□□□□□ -0.19
RUNX1T1-234ENST00000521553 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
RUNX1T1-234ENST00000521553 OCEL1Q9H607 264 aa13.85□□□□□ -0.19
RUNX1T1-234ENST00000521553 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
RUNX1T1-234ENST00000521553 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
RUNX1T1-234ENST00000521553 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
RUNX1T1-234ENST00000521553 EMP3P54852 163 aa13.7□□□□□ -0.22
RUNX1T1-234ENST00000521553 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
RUNX1T1-234ENST00000521553 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
RUNX1T1-234ENST00000521553 PYGBP11216 843 aa13.66□□□□□ -0.22
RUNX1T1-234ENST00000521553 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
RUNX1T1-234ENST00000521553 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
RUNX1T1-234ENST00000521553 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
RUNX1T1-234ENST00000521553 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
RUNX1T1-234ENST00000521553 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
RUNX1T1-234ENST00000521553 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
RUNX1T1-234ENST00000521553 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
RUNX1T1-234ENST00000521553 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
RUNX1T1-234ENST00000521553 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
RUNX1T1-234ENST00000521553 KRTAP3-2Q9BYR7 98 aa13.55□□□□□ -0.24
RUNX1T1-234ENST00000521553 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
RUNX1T1-234ENST00000521553 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
RUNX1T1-234ENST00000521553 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
RUNX1T1-234ENST00000521553 POTEB3A0JP26 581 aa13.48□□□□□ -0.25
RUNX1T1-234ENST00000521553 POTEBQ6S5H4 581 aa13.48□□□□□ -0.25
RUNX1T1-234ENST00000521553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
RUNX1T1-234ENST00000521553 GSE1Q14687 1217 aa13.42□□□□□ -0.26
RUNX1T1-234ENST00000521553 G3V3G9 751 aa13.4□□□□□ -0.26
RUNX1T1-234ENST00000521553 ABCC9O60706 1549 aa13.4□□□□□ -0.26
RUNX1T1-234ENST00000521553 PSEN1P49768 467 aa13.38□□□□□ -0.27
RUNX1T1-234ENST00000521553 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
RUNX1T1-234ENST00000521553 RNF166Q96A37 237 aaPredicted RBP13.32□□□□□ -0.28
RUNX1T1-234ENST00000521553 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
RUNX1T1-234ENST00000521553 ERBB3P21860 1342 aa13.31□□□□□ -0.28
RUNX1T1-234ENST00000521553 HOXB1P14653 301 aaPredicted RBP13.3□□□□□ -0.28
RUNX1T1-234ENST00000521553 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
RUNX1T1-234ENST00000521553 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
RUNX1T1-234ENST00000521553 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
RUNX1T1-234ENST00000521553 DOK7Q18PE1 504 aa13.28□□□□□ -0.28
RUNX1T1-234ENST00000521553 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
RUNX1T1-234ENST00000521553 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
RUNX1T1-234ENST00000521553 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
RUNX1T1-234ENST00000521553 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
RUNX1T1-234ENST00000521553 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
RUNX1T1-234ENST00000521553 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
RUNX1T1-234ENST00000521553 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
RUNX1T1-234ENST00000521553 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
RUNX1T1-234ENST00000521553 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
RUNX1T1-234ENST00000521553 PTGER2P43116 358 aa13.11□□□□□ -0.31
RUNX1T1-234ENST00000521553 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
RUNX1T1-234ENST00000521553 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
RUNX1T1-234ENST00000521553 TRIM41Q8WV44 630 aa13□□□□□ -0.33
RUNX1T1-234ENST00000521553 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
RUNX1T1-234ENST00000521553 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
RUNX1T1-234ENST00000521553 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms