RNA–Protein interactions for RNA: ENST00000521312.1

UBR5-209, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-209ENST00000521312 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
UBR5-209ENST00000521312 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
UBR5-209ENST00000521312 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
UBR5-209ENST00000521312 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
UBR5-209ENST00000521312 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
UBR5-209ENST00000521312 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
UBR5-209ENST00000521312 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
UBR5-209ENST00000521312 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
UBR5-209ENST00000521312 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
UBR5-209ENST00000521312 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
UBR5-209ENST00000521312 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
UBR5-209ENST00000521312 PROM2Q8N271 834 aa12.5□□□□□ -0.41
UBR5-209ENST00000521312 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
UBR5-209ENST00000521312 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
UBR5-209ENST00000521312 MIER1Q8N108 512 aa12.45□□□□□ -0.42
UBR5-209ENST00000521312 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
UBR5-209ENST00000521312 TIE1P35590 1138 aa12.43□□□□□ -0.42
UBR5-209ENST00000521312 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
UBR5-209ENST00000521312 MAP3K13O43283 966 aa12.4□□□□□ -0.42
UBR5-209ENST00000521312 SEC24BO95487 1268 aa12.4□□□□□ -0.42
UBR5-209ENST00000521312 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
UBR5-209ENST00000521312 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
UBR5-209ENST00000521312 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
UBR5-209ENST00000521312 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
UBR5-209ENST00000521312 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
UBR5-209ENST00000521312 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
UBR5-209ENST00000521312 LCE2DQ5TA82 110 aaPredicted RBP12.31□□□□□ -0.44
UBR5-209ENST00000521312 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
UBR5-209ENST00000521312 IER5LQ5T953 404 aa12.3□□□□□ -0.44
UBR5-209ENST00000521312 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
UBR5-209ENST00000521312 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
UBR5-209ENST00000521312 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
UBR5-209ENST00000521312 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
UBR5-209ENST00000521312 PLCG2P16885 1265 aa12.17□□□□□ -0.46
UBR5-209ENST00000521312 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
UBR5-209ENST00000521312 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
UBR5-209ENST00000521312 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
UBR5-209ENST00000521312 NUBP1P53384 320 aa12.15□□□□□ -0.46
UBR5-209ENST00000521312 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
UBR5-209ENST00000521312 ST18O60284 1047 aa12.08□□□□□ -0.48
UBR5-209ENST00000521312 SNPHO15079 494 aa12.03□□□□□ -0.48
UBR5-209ENST00000521312 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
UBR5-209ENST00000521312 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
UBR5-209ENST00000521312 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
UBR5-209ENST00000521312 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
UBR5-209ENST00000521312 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
UBR5-209ENST00000521312 PYGBP11216 843 aa11.96□□□□□ -0.49
UBR5-209ENST00000521312 FKBP8Q14318 412 aa11.93□□□□□ -0.5
UBR5-209ENST00000521312 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
UBR5-209ENST00000521312 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
UBR5-209ENST00000521312 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
UBR5-209ENST00000521312 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
UBR5-209ENST00000521312 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
UBR5-209ENST00000521312 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
UBR5-209ENST00000521312 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
UBR5-209ENST00000521312 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
UBR5-209ENST00000521312 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
UBR5-209ENST00000521312 GSE1Q14687 1217 aa11.84□□□□□ -0.51
UBR5-209ENST00000521312 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
UBR5-209ENST00000521312 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
UBR5-209ENST00000521312 EMP3P54852 163 aa11.79□□□□□ -0.52
UBR5-209ENST00000521312 PDCD7Q8N8D1 485 aaKnown RBP11.77□□□□□ -0.53
UBR5-209ENST00000521312 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBR5-209ENST00000521312 G3V3G9 751 aa11.71□□□□□ -0.53
UBR5-209ENST00000521312 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
UBR5-209ENST00000521312 PSEN1P49768 467 aa11.71□□□□□ -0.53
UBR5-209ENST00000521312 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
UBR5-209ENST00000521312 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
UBR5-209ENST00000521312 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
UBR5-209ENST00000521312 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
UBR5-209ENST00000521312 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
UBR5-209ENST00000521312 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
UBR5-209ENST00000521312 ZNF710Q8N1W2 664 aa11.59□□□□□ -0.55
UBR5-209ENST00000521312 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
UBR5-209ENST00000521312 ILDR1Q86SU0 546 aaPredicted RBP11.58□□□□□ -0.56
UBR5-209ENST00000521312 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
UBR5-209ENST00000521312 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
UBR5-209ENST00000521312 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
UBR5-209ENST00000521312 DPY19L2Q6NUT2 758 aa11.55□□□□□ -0.56
UBR5-209ENST00000521312 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
UBR5-209ENST00000521312 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
UBR5-209ENST00000521312 RIMBP2O15034 1052 aa11.52□□□□□ -0.57
UBR5-209ENST00000521312 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
UBR5-209ENST00000521312 ERBB3P21860 1342 aa11.51□□□□□ -0.57
UBR5-209ENST00000521312 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
UBR5-209ENST00000521312 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
UBR5-209ENST00000521312 RNF166Q96A37 237 aaPredicted RBP11.42□□□□□ -0.58
UBR5-209ENST00000521312 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
UBR5-209ENST00000521312 VARS2Q5ST30 1063 aaKnown RBP11.38□□□□□ -0.59
UBR5-209ENST00000521312 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
UBR5-209ENST00000521312 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
UBR5-209ENST00000521312 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
UBR5-209ENST00000521312 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
UBR5-209ENST00000521312 PTGER2P43116 358 aa11.32□□□□□ -0.6
UBR5-209ENST00000521312 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
UBR5-209ENST00000521312 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
UBR5-209ENST00000521312 SOX12O15370 315 aa11.29□□□□□ -0.6
UBR5-209ENST00000521312 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
UBR5-209ENST00000521312 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
UBR5-209ENST00000521312 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms