RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
SQLE-205ENST00000521232 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
SQLE-205ENST00000521232 TRHP20396 242 aaPredicted RBP29.23■■■□□ 2.27
SQLE-205ENST00000521232 KIAA0586Q9BVV6 1533 aa29.2■■■□□ 2.27
SQLE-205ENST00000521232 RAPGEF2Q9Y4G8 1499 aa29.02■■■□□ 2.24
SQLE-205ENST00000521232 IQGAP2Q13576 1575 aa28.94■■■□□ 2.22
SQLE-205ENST00000521232 CARMIL2Q6F5E8 1435 aa28.89■■■□□ 2.22
SQLE-205ENST00000521232 PTPRGP23470 1445 aa28.86■■■□□ 2.21
SQLE-205ENST00000521232 NPM1P06748 294 aaKnown RBP eCLIP28.85■■■□□ 2.21
SQLE-205ENST00000521232 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
SQLE-205ENST00000521232 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
SQLE-205ENST00000521232 ADCY10Q96PN6 1610 aa28.83■■■□□ 2.21
SQLE-205ENST00000521232 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
SQLE-205ENST00000521232 UGGT2Q9NYU1 1516 aa28.8■■■□□ 2.2
SQLE-205ENST00000521232 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
SQLE-205ENST00000521232 TTBK1Q5TCY1 1321 aaPredicted RBP28.74■■■□□ 2.19
SQLE-205ENST00000521232 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
SQLE-205ENST00000521232 CTTNBP2Q8WZ74 1663 aa28.73■■■□□ 2.19
SQLE-205ENST00000521232 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
SQLE-205ENST00000521232 ABCC10Q5T3U5 1492 aa28.68■■■□□ 2.18
SQLE-205ENST00000521232 KIAA0556O60303 1618 aa28.67■■■□□ 2.18
SQLE-205ENST00000521232 EEA1Q15075 1411 aa28.67■■■□□ 2.18
SQLE-205ENST00000521232 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
SQLE-205ENST00000521232 UACAQ9BZF9 1416 aa28.65■■■□□ 2.18
SQLE-205ENST00000521232 UHRF1BP1LA0JNW5 1464 aa28.65■■■□□ 2.18
SQLE-205ENST00000521232 ABCC2Q92887 1545 aa28.64■■■□□ 2.17
SQLE-205ENST00000521232 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
SQLE-205ENST00000521232 DIP2BQ9P265 1576 aa28.58■■■□□ 2.17
SQLE-205ENST00000521232 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
SQLE-205ENST00000521232 FAM9AQ8IZU1 332 aaPredicted RBP28.51■■■□□ 2.15
SQLE-205ENST00000521232 KDM5BQ9UGL1 1544 aa28.51■■■□□ 2.15
SQLE-205ENST00000521232 PLB1Q6P1J6 1458 aa28.49■■■□□ 2.15
SQLE-205ENST00000521232 ASXL2Q76L83 1435 aa28.49■■■□□ 2.15
SQLE-205ENST00000521232 ZCCHC11Q5TAX3 1644 aaKnown RBP28.41■■■□□ 2.14
SQLE-205ENST00000521232 ABCA8O94911 1581 aa28.41■■■□□ 2.14
SQLE-205ENST00000521232 GLI2P10070 1586 aa28.39■■■□□ 2.14
SQLE-205ENST00000521232 P3H3Q8IVL6 736 aa28.39■■■□□ 2.14
SQLE-205ENST00000521232 KIF21BO75037 1637 aa28.37■■■□□ 2.13
SQLE-205ENST00000521232 TSPOAP1O95153 1857 aa28.36■■■□□ 2.13
SQLE-205ENST00000521232 SAMD9Q5K651 1589 aa28.36■■■□□ 2.13
SQLE-205ENST00000521232 EPRSP07814 1512 aaKnown RBP28.33■■■□□ 2.13
SQLE-205ENST00000521232 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
SQLE-205ENST00000521232 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
SQLE-205ENST00000521232 PPRC1Q5VV67 1664 aaKnown RBP28.23■■■□□ 2.11
SQLE-205ENST00000521232 KDM6BO15054 1643 aa28.22■■■□□ 2.11
SQLE-205ENST00000521232 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
SQLE-205ENST00000521232 ATP10BO94823 1461 aa28.2■■■□□ 2.1
SQLE-205ENST00000521232 UBTFP17480 764 aaKnown RBP28.18■■■□□ 2.1
SQLE-205ENST00000521232 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
SQLE-205ENST00000521232 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
SQLE-205ENST00000521232 RAPGEF6Q8TEU7 1601 aa28.16■■■□□ 2.1
SQLE-205ENST00000521232 EFCAB5A4FU69 1503 aa28.15■■■□□ 2.1
SQLE-205ENST00000521232 ARID3CA6NKF2 412 aa28.14■■■□□ 2.1
SQLE-205ENST00000521232 EHMT2Q96KQ7 1210 aa28.14■■■□□ 2.1
SQLE-205ENST00000521232 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
SQLE-205ENST00000521232 CD109Q6YHK3 1445 aa28.08■■■□□ 2.09
SQLE-205ENST00000521232 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
SQLE-205ENST00000521232 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
SQLE-205ENST00000521232 MAGI3Q5TCQ9 1506 aa28.05■■■□□ 2.08
SQLE-205ENST00000521232 COL17A1Q9UMD9 1497 aaPredicted RBP28.04■■■□□ 2.08
SQLE-205ENST00000521232 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
SQLE-205ENST00000521232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
SQLE-205ENST00000521232 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
SQLE-205ENST00000521232 ARHGAP35Q9NRY4 1499 aa27.97■■■□□ 2.07
SQLE-205ENST00000521232 ABCA9Q8IUA7 1624 aa27.94■■■□□ 2.06
SQLE-205ENST00000521232 PLEKHD1A6NEE1 506 aa27.93■■■□□ 2.06
SQLE-205ENST00000521232 FMN1Q68DA7 1419 aa27.92■■■□□ 2.06
SQLE-205ENST00000521232 PHLDB1Q86UU1 1377 aa27.84■■■□□ 2.05
SQLE-205ENST00000521232 KDM4FA0A1W2PPD8 638 aa27.83■■■□□ 2.05
SQLE-205ENST00000521232 ARAP3Q8WWN8 1544 aa27.82■■■□□ 2.04
SQLE-205ENST00000521232 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
SQLE-205ENST00000521232 ATP1B4Q9UN42 357 aaPredicted RBP27.8■■■□□ 2.04
SQLE-205ENST00000521232 HECW1Q76N89 1606 aa27.79■■■□□ 2.04
SQLE-205ENST00000521232 NEO1Q92859 1461 aa27.77■■■□□ 2.04
SQLE-205ENST00000521232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.037e-7■■□□□ 13.4
SQLE-205ENST00000521232 CDK11AQ9UQ88 783 aaPredicted RBP27.73■■■□□ 2.03
SQLE-205ENST00000521232 RAPGEF3O95398 923 aa27.67■■■□□ 2.02
SQLE-205ENST00000521232 TTC37Q6PGP7 1564 aa27.67■■■□□ 2.02
SQLE-205ENST00000521232 CLIP1P30622 1438 aa27.67■■■□□ 2.02
SQLE-205ENST00000521232 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
SQLE-205ENST00000521232 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
SQLE-205ENST00000521232 ADGRL1O94910 1474 aa27.64■■■□□ 2.02
SQLE-205ENST00000521232 AKNAQ7Z591 1439 aa27.63■■■□□ 2.01
SQLE-205ENST00000521232 FANCAO15360 1455 aa27.63■■■□□ 2.01
SQLE-205ENST00000521232 PLCH2O75038 1416 aa27.61■■■□□ 2.01
SQLE-205ENST00000521232 TROQ12816 1431 aaPredicted RBP27.61■■■□□ 2.01
SQLE-205ENST00000521232 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
SQLE-205ENST00000521232 CFAP74Q9C0B2 1584 aa27.6■■■□□ 2.01
SQLE-205ENST00000521232 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
SQLE-205ENST00000521232 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
SQLE-205ENST00000521232 FRMPD1Q5SYB0 1578 aa27.56■■■□□ 2
SQLE-205ENST00000521232 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
SQLE-205ENST00000521232 KIF14Q15058 1648 aa27.54■■■□□ 2
SQLE-205ENST00000521232 EFCAB2Q5VUJ9 269 aa27.52■■■□□ 2
SQLE-205ENST00000521232 RICTORQ6R327 1708 aa27.52■■■□□ 2
SQLE-205ENST00000521232 MYO5CQ9NQX4 1742 aa27.51■■□□□ 1.99
SQLE-205ENST00000521232 SCAPERQ9BY12 1400 aa27.46■■□□□ 1.99
SQLE-205ENST00000521232 CEP162Q5TB80 1403 aa27.44■■□□□ 1.98
SQLE-205ENST00000521232 ZMYM4Q5VZL5 1548 aa27.41■■□□□ 1.98
SQLE-205ENST00000521232 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms