RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
SNHG6-204ENST00000521127 FAM69CQ0P6D2 419 aa32.98■■■□□ 2.87
SNHG6-204ENST00000521127 IGF1RP08069 1367 aa32.97■■■□□ 2.87
SNHG6-204ENST00000521127 ABCC10Q5T3U5 1492 aa32.97■■■□□ 2.87
SNHG6-204ENST00000521127 NPM1P06748 294 aaKnown RBP eCLIP32.95■■■□□ 2.87
SNHG6-204ENST00000521127 KIAA0586Q9BVV6 1533 aa32.94■■■□□ 2.86
SNHG6-204ENST00000521127 ADCY10Q96PN6 1610 aa32.93■■■□□ 2.86
SNHG6-204ENST00000521127 MAPKBP1O60336 1514 aa32.92■■■□□ 2.86
SNHG6-204ENST00000521127 KIF27Q86VH2 1401 aa32.88■■■□□ 2.85
SNHG6-204ENST00000521127 DIP2BQ9P265 1576 aa32.87■■■□□ 2.85
SNHG6-204ENST00000521127 CUL7Q14999 1698 aa32.84■■■□□ 2.85
SNHG6-204ENST00000521127 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
SNHG6-204ENST00000521127 PTPRGP23470 1445 aa32.71■■■□□ 2.83
SNHG6-204ENST00000521127 TSPOAP1O95153 1857 aa32.66■■■□□ 2.82
SNHG6-204ENST00000521127 TTBK1Q5TCY1 1321 aaPredicted RBP32.66■■■□□ 2.82
SNHG6-204ENST00000521127 KDM6BO15054 1643 aa32.65■■■□□ 2.82
SNHG6-204ENST00000521127 TNIKQ9UKE5 1360 aa32.61■■■□□ 2.81
SNHG6-204ENST00000521127 CARMIL2Q6F5E8 1435 aa32.59■■■□□ 2.81
SNHG6-204ENST00000521127 KDM4FA0A1W2PPD8 638 aa32.57■■■□□ 2.8
SNHG6-204ENST00000521127 ABCC2Q92887 1545 aa32.56■■■□□ 2.8
SNHG6-204ENST00000521127 IQGAP2Q13576 1575 aa32.54■■■□□ 2.8
SNHG6-204ENST00000521127 ASXL2Q76L83 1435 aa32.51■■■□□ 2.79
SNHG6-204ENST00000521127 DISP1Q96F81 1524 aa32.47■■■□□ 2.79
SNHG6-204ENST00000521127 UHRF1BP1LA0JNW5 1464 aa32.47■■■□□ 2.79
SNHG6-204ENST00000521127 PLB1Q6P1J6 1458 aa32.46■■■□□ 2.79
SNHG6-204ENST00000521127 UACAQ9BZF9 1416 aa32.44■■■□□ 2.78
SNHG6-204ENST00000521127 GLI2P10070 1586 aa32.43■■■□□ 2.78
SNHG6-204ENST00000521127 PPRC1Q5VV67 1664 aaKnown RBP32.43■■■□□ 2.78
SNHG6-204ENST00000521127 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
SNHG6-204ENST00000521127 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
SNHG6-204ENST00000521127 KDM5BQ9UGL1 1544 aa32.34■■■□□ 2.77
SNHG6-204ENST00000521127 EPRSP07814 1512 aaKnown RBP32.31■■■□□ 2.76
SNHG6-204ENST00000521127 COL17A1Q9UMD9 1497 aaPredicted RBP32.29■■■□□ 2.76
SNHG6-204ENST00000521127 KIAA0556O60303 1618 aa32.26■■■□□ 2.76
SNHG6-204ENST00000521127 ZCCHC11Q5TAX3 1644 aaKnown RBP32.25■■■□□ 2.75
SNHG6-204ENST00000521127 MAP3K4Q9Y6R4 1608 aa32.24■■■□□ 2.75
SNHG6-204ENST00000521127 ADGRL1O94910 1474 aa32.16■■■□□ 2.74
SNHG6-204ENST00000521127 TEX14Q8IWB6 1497 aa32.14■■■□□ 2.74
SNHG6-204ENST00000521127 WDR7Q9Y4E6 1490 aa32.11■■■□□ 2.73
SNHG6-204ENST00000521127 CTTNBP2Q8WZ74 1663 aa32.08■■■□□ 2.73
SNHG6-204ENST00000521127 ABCA8O94911 1581 aa32.02■■■□□ 2.72
SNHG6-204ENST00000521127 GOLGA3Q08378 1498 aa32.02■■■□□ 2.72
SNHG6-204ENST00000521127 KCNH8Q96L42 1107 aa31.98■■■□□ 2.71
SNHG6-204ENST00000521127 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
SNHG6-204ENST00000521127 CD109Q6YHK3 1445 aa31.97■■■□□ 2.71
SNHG6-204ENST00000521127 MAGI3Q5TCQ9 1506 aa31.95■■■□□ 2.7
SNHG6-204ENST00000521127 CFAP43Q8NDM7 1665 aa31.92■■■□□ 2.7
SNHG6-204ENST00000521127 ILDR1Q86SU0 546 aaPredicted RBP31.9■■■□□ 2.7
SNHG6-204ENST00000521127 HECW2Q9P2P5 1572 aa31.82■■■□□ 2.68
SNHG6-204ENST00000521127 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
SNHG6-204ENST00000521127 P3H3Q8IVL6 736 aa31.8■■■□□ 2.68
SNHG6-204ENST00000521127 ATP10BO94823 1461 aa31.78■■■□□ 2.68
SNHG6-204ENST00000521127 ARAP3Q8WWN8 1544 aa31.71■■■□□ 2.67
SNHG6-204ENST00000521127 KIF21BO75037 1637 aa31.69■■■□□ 2.66
SNHG6-204ENST00000521127 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
SNHG6-204ENST00000521127 CSRNP3Q8WYN3 585 aa31.64■■■□□ 2.66
SNHG6-204ENST00000521127 SAMD9Q5K651 1589 aa31.64■■■□□ 2.65
SNHG6-204ENST00000521127 ABCA9Q8IUA7 1624 aa31.64■■■□□ 2.65
SNHG6-204ENST00000521127 PHLDB1Q86UU1 1377 aa31.58■■■□□ 2.65
SNHG6-204ENST00000521127 RAPGEF6Q8TEU7 1601 aa31.58■■■□□ 2.65
SNHG6-204ENST00000521127 RAPGEF3O95398 923 aa31.56■■■□□ 2.64
SNHG6-204ENST00000521127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.51■■■□□ 2.63
SNHG6-204ENST00000521127 HNRNPUL2Q1KMD3 747 aaKnown RBP31.51■■■□□ 2.63
SNHG6-204ENST00000521127 NEO1Q92859 1461 aa31.51■■■□□ 2.63
SNHG6-204ENST00000521127 NUP153P49790 1475 aaKnown RBP31.5■■■□□ 2.63
SNHG6-204ENST00000521127 ADAMTSL3P82987 1691 aa31.48■■■□□ 2.63
SNHG6-204ENST00000521127 RANGAP1P46060 587 aaPredicted RBP31.46■■■□□ 2.63
SNHG6-204ENST00000521127 FRMPD1Q5SYB0 1578 aa31.45■■■□□ 2.63
SNHG6-204ENST00000521127 FHOD3Q2V2M9 1422 aa31.44■■■□□ 2.62
SNHG6-204ENST00000521127 PTPRMP28827 1452 aa31.44■■■□□ 2.62
SNHG6-204ENST00000521127 EEA1Q15075 1411 aa31.38■■■□□ 2.61
SNHG6-204ENST00000521127 BCORL1Q5H9F3 1711 aa31.35■■■□□ 2.61
SNHG6-204ENST00000521127 PLEKHD1A6NEE1 506 aa31.35■■■□□ 2.61
SNHG6-204ENST00000521127 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
SNHG6-204ENST00000521127 MADDQ8WXG6 1647 aa31.31■■■□□ 2.6
SNHG6-204ENST00000521127 DENND4BO75064 1496 aaPredicted RBP31.3■■■□□ 2.6
SNHG6-204ENST00000521127 AKNAQ7Z591 1439 aa31.29■■■□□ 2.6
SNHG6-204ENST00000521127 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
SNHG6-204ENST00000521127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.27■■■□□ 2.6
SNHG6-204ENST00000521127 ARHGEF40Q8TER5 1519 aa31.26■■■□□ 2.59
SNHG6-204ENST00000521127 FANCAO15360 1455 aa31.25■■■□□ 2.59
SNHG6-204ENST00000521127 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
SNHG6-204ENST00000521127 TTC37Q6PGP7 1564 aa31.22■■■□□ 2.59
SNHG6-204ENST00000521127 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
SNHG6-204ENST00000521127 PCF11O94913 1555 aaKnown RBP31.19■■■□□ 2.58
SNHG6-204ENST00000521127 LMTK3Q96Q04 1460 aa31.19■■■□□ 2.58
SNHG6-204ENST00000521127 CFAP74Q9C0B2 1584 aa31.18■■■□□ 2.58
SNHG6-204ENST00000521127 RIMS1Q86UR5 1692 aaKnown RBP31.18■■■□□ 2.58
SNHG6-204ENST00000521127 CDK13Q14004 1512 aaKnown RBP31.17■■■□□ 2.58
SNHG6-204ENST00000521127 ZMYM4Q5VZL5 1548 aa31.15■■■□□ 2.58
SNHG6-204ENST00000521127 YEATS2Q9ULM3 1422 aa31.15■■■□□ 2.58
SNHG6-204ENST00000521127 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
SNHG6-204ENST00000521127 ZFYVE16Q7Z3T8 1539 aa31.1■■■□□ 2.57
SNHG6-204ENST00000521127 PLCH2O75038 1416 aa31.07■■■□□ 2.56
SNHG6-204ENST00000521127 POGZQ7Z3K3 1410 aa31.07■■■□□ 2.56
SNHG6-204ENST00000521127 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
SNHG6-204ENST00000521127 PLPPR3Q6T4P5 718 aa31.06■■■□□ 2.56
SNHG6-204ENST00000521127 MAGI2Q86UL8 1455 aa31.06■■■□□ 2.56
SNHG6-204ENST00000521127 SCAPERQ9BY12 1400 aa31.06■■■□□ 2.56
SNHG6-204ENST00000521127 HSPA2P54652 639 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms