RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 FAM212AQ96EL1 285 aa14.33□□□□□ -0.12
PTPN12-214ENST00000520947 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
PTPN12-214ENST00000520947 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
PTPN12-214ENST00000520947 CLCN6P51797 869 aa14.28□□□□□ -0.12
PTPN12-214ENST00000520947 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
PTPN12-214ENST00000520947 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
PTPN12-214ENST00000520947 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
PTPN12-214ENST00000520947 GSE1Q14687 1217 aa14.22□□□□□ -0.13
PTPN12-214ENST00000520947 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
PTPN12-214ENST00000520947 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
PTPN12-214ENST00000520947 PYGBP11216 843 aa14.17□□□□□ -0.14
PTPN12-214ENST00000520947 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
PTPN12-214ENST00000520947 MAP3K13O43283 966 aa14.13□□□□□ -0.15
PTPN12-214ENST00000520947 LHX8Q68G74 356 aa14.12□□□□□ -0.15
PTPN12-214ENST00000520947 MS4A3Q96HJ5 214 aa14.12□□□□□ -0.15
PTPN12-214ENST00000520947 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
PTPN12-214ENST00000520947 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
PTPN12-214ENST00000520947 IFNL1Q8IU54 200 aa14□□□□□ -0.17
PTPN12-214ENST00000520947 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
PTPN12-214ENST00000520947 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
PTPN12-214ENST00000520947 PKD2Q13563 968 aa13.98□□□□□ -0.17
PTPN12-214ENST00000520947 PCDHB8Q9UN66 801 aa13.98□□□□□ -0.17
PTPN12-214ENST00000520947 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
PTPN12-214ENST00000520947 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
PTPN12-214ENST00000520947 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
PTPN12-214ENST00000520947 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
PTPN12-214ENST00000520947 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
PTPN12-214ENST00000520947 ASTLQ6HA08 431 aaPredicted RBP13.87□□□□□ -0.19
PTPN12-214ENST00000520947 RNF25Q96BH1 459 aaPredicted RBP13.87□□□□□ -0.19
PTPN12-214ENST00000520947 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
PTPN12-214ENST00000520947 TIE1P35590 1138 aa13.86□□□□□ -0.19
PTPN12-214ENST00000520947 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
PTPN12-214ENST00000520947 TTLL13PA6NNM8 815 aa13.82□□□□□ -0.2
PTPN12-214ENST00000520947 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
PTPN12-214ENST00000520947 RIOK3O14730 519 aaKnown RBP13.82□□□□□ -0.2
PTPN12-214ENST00000520947 RGL2O15211 777 aa13.82□□□□□ -0.2
PTPN12-214ENST00000520947 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
PTPN12-214ENST00000520947 PSEN1P49768 467 aa13.81□□□□□ -0.2
PTPN12-214ENST00000520947 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
PTPN12-214ENST00000520947 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
PTPN12-214ENST00000520947 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-214ENST00000520947 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
PTPN12-214ENST00000520947 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
PTPN12-214ENST00000520947 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
PTPN12-214ENST00000520947 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
PTPN12-214ENST00000520947 C7P10643 843 aa13.73□□□□□ -0.21
PTPN12-214ENST00000520947 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
PTPN12-214ENST00000520947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
PTPN12-214ENST00000520947 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
PTPN12-214ENST00000520947 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
PTPN12-214ENST00000520947 GOLGA2Q08379 1002 aa13.66□□□□□ -0.22
PTPN12-214ENST00000520947 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
PTPN12-214ENST00000520947 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
PTPN12-214ENST00000520947 STK25O00506 426 aa13.62□□□□□ -0.23
PTPN12-214ENST00000520947 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
PTPN12-214ENST00000520947 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
PTPN12-214ENST00000520947 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
PTPN12-214ENST00000520947 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
PTPN12-214ENST00000520947 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
PTPN12-214ENST00000520947 SEC24BO95487 1268 aa13.58□□□□□ -0.24
PTPN12-214ENST00000520947 IER5LQ5T953 404 aa13.58□□□□□ -0.24
PTPN12-214ENST00000520947 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
PTPN12-214ENST00000520947 COLQQ9Y215 455 aaPredicted RBP13.56□□□□□ -0.24
PTPN12-214ENST00000520947 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
PTPN12-214ENST00000520947 PLCG2P16885 1265 aa13.52□□□□□ -0.25
PTPN12-214ENST00000520947 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
PTPN12-214ENST00000520947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.252e-8■□□□□ 8.8
PTPN12-214ENST00000520947 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
PTPN12-214ENST00000520947 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
PTPN12-214ENST00000520947 HS6ST3Q8IZP7 471 aa13.48□□□□□ -0.25
PTPN12-214ENST00000520947 SCUBE2Q9NQ36 999 aa13.45□□□□□ -0.26
PTPN12-214ENST00000520947 SOX12O15370 315 aa13.43□□□□□ -0.26
PTPN12-214ENST00000520947 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
PTPN12-214ENST00000520947 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
PTPN12-214ENST00000520947 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
PTPN12-214ENST00000520947 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
PTPN12-214ENST00000520947 MFRPQ9BY79 579 aa13.38□□□□□ -0.27
PTPN12-214ENST00000520947 NLRP6P59044 892 aa13.36□□□□□ -0.27
PTPN12-214ENST00000520947 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
PTPN12-214ENST00000520947 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
PTPN12-214ENST00000520947 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
PTPN12-214ENST00000520947 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
PTPN12-214ENST00000520947 POTEMA6NI47 508 aa13.29□□□□□ -0.28
PTPN12-214ENST00000520947 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
PTPN12-214ENST00000520947 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
PTPN12-214ENST00000520947 G3V3G9 751 aa13.27□□□□□ -0.29
PTPN12-214ENST00000520947 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
PTPN12-214ENST00000520947 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
PTPN12-214ENST00000520947 LCE2DQ5TA82 110 aaPredicted RBP13.24□□□□□ -0.29
PTPN12-214ENST00000520947 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
PTPN12-214ENST00000520947 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
PTPN12-214ENST00000520947 PPP1R37O75864 691 aa13.21□□□□□ -0.29
PTPN12-214ENST00000520947 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
PTPN12-214ENST00000520947 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
PTPN12-214ENST00000520947 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
PTPN12-214ENST00000520947 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
PTPN12-214ENST00000520947 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
PTPN12-214ENST00000520947 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
PTPN12-214ENST00000520947 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
PTPN12-214ENST00000520947 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms