RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
PABPC1-216ENST00000520868 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
PABPC1-216ENST00000520868 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
PABPC1-216ENST00000520868 MS4A3Q96HJ5 214 aa15.25■□□□□ 0.03
PABPC1-216ENST00000520868 CLCN6P51797 869 aa15.23■□□□□ 0.03
PABPC1-216ENST00000520868 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
PABPC1-216ENST00000520868 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
PABPC1-216ENST00000520868 MAP3K13O43283 966 aa15.18■□□□□ 0.02
PABPC1-216ENST00000520868 DCAF8Q5TAQ9 597 aa15.17■□□□□ 0.02
PABPC1-216ENST00000520868 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
PABPC1-216ENST00000520868 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
PABPC1-216ENST00000520868 SPOCK2Q92563 424 aa15.1■□□□□ 0.01
PABPC1-216ENST00000520868 PYGBP11216 843 aa15.09■□□□□ 0.01
PABPC1-216ENST00000520868 PCDHB13Q9Y5F0 798 aa15.05■□□□□ -0
PABPC1-216ENST00000520868 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
PABPC1-216ENST00000520868 IFNL1Q8IU54 200 aa15.02■□□□□ -0
PABPC1-216ENST00000520868 GSE1Q14687 1217 aa15□□□□□ -0.01
PABPC1-216ENST00000520868 ATMINO43313 823 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-216ENST00000520868 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-216ENST00000520868 ASTLQ6HA08 431 aaPredicted RBP14.98□□□□□ -0.01
PABPC1-216ENST00000520868 BMP2KQ9NSY1 1161 aaPredicted RBP14.98□□□□□ -0.01
PABPC1-216ENST00000520868 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
PABPC1-216ENST00000520868 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
PABPC1-216ENST00000520868 PCDHB8Q9UN66 801 aa14.94□□□□□ -0.02
PABPC1-216ENST00000520868 TTLL13PA6NNM8 815 aa14.9□□□□□ -0.02
PABPC1-216ENST00000520868 TIE1P35590 1138 aa14.9□□□□□ -0.02
PABPC1-216ENST00000520868 LHX8Q68G74 356 aa14.87□□□□□ -0.03
PABPC1-216ENST00000520868 PLSCR2Q9NRY7 297 aa14.85□□□□□ -0.03
PABPC1-216ENST00000520868 CHRM1P11229 460 aaPredicted RBP14.84□□□□□ -0.03
PABPC1-216ENST00000520868 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
PABPC1-216ENST00000520868 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
PABPC1-216ENST00000520868 METRNQ9UJH8 293 aa14.82□□□□□ -0.04
PABPC1-216ENST00000520868 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
PABPC1-216ENST00000520868 SLC39A7Q92504 469 aa14.79□□□□□ -0.04
PABPC1-216ENST00000520868 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
PABPC1-216ENST00000520868 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
PABPC1-216ENST00000520868 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
PABPC1-216ENST00000520868 C7P10643 843 aa14.75□□□□□ -0.05
PABPC1-216ENST00000520868 COLQQ9Y215 455 aaPredicted RBP14.7□□□□□ -0.06
PABPC1-216ENST00000520868 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
PABPC1-216ENST00000520868 PSEN1P49768 467 aa14.68□□□□□ -0.06
PABPC1-216ENST00000520868 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
PABPC1-216ENST00000520868 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
PABPC1-216ENST00000520868 PKD2Q13563 968 aa14.62□□□□□ -0.07
PABPC1-216ENST00000520868 OTUD5Q96G74 571 aa14.61□□□□□ -0.07
PABPC1-216ENST00000520868 SEC24BO95487 1268 aa14.6□□□□□ -0.07
PABPC1-216ENST00000520868 IER5LQ5T953 404 aa14.6□□□□□ -0.07
PABPC1-216ENST00000520868 IRX5P78411 483 aaPredicted RBP14.57□□□□□ -0.08
PABPC1-216ENST00000520868 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
PABPC1-216ENST00000520868 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
PABPC1-216ENST00000520868 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
PABPC1-216ENST00000520868 PLCG2P16885 1265 aa14.5□□□□□ -0.09
PABPC1-216ENST00000520868 GOLGA2Q08379 1002 aa14.5□□□□□ -0.09
PABPC1-216ENST00000520868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-216ENST00000520868 RGL2O15211 777 aa14.49□□□□□ -0.09
PABPC1-216ENST00000520868 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-216ENST00000520868 MKRN3Q13064 507 aaKnown RBP14.48□□□□□ -0.09
PABPC1-216ENST00000520868 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
PABPC1-216ENST00000520868 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
PABPC1-216ENST00000520868 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-216ENST00000520868 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
PABPC1-216ENST00000520868 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
PABPC1-216ENST00000520868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
PABPC1-216ENST00000520868 NISCHQ9Y2I1 1504 aa14.39□□□□□ -0.11
PABPC1-216ENST00000520868 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
PABPC1-216ENST00000520868 MAMSTRQ6ZN01 415 aa14.38□□□□□ -0.11
PABPC1-216ENST00000520868 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
PABPC1-216ENST00000520868 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-216ENST00000520868 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-216ENST00000520868 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
PABPC1-216ENST00000520868 STK25O00506 426 aa14.31□□□□□ -0.12
PABPC1-216ENST00000520868 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-216ENST00000520868 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.13
PABPC1-216ENST00000520868 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
PABPC1-216ENST00000520868 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
PABPC1-216ENST00000520868 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-216ENST00000520868 SOX12O15370 315 aa14.21□□□□□ -0.13
PABPC1-216ENST00000520868 MFRPQ9BY79 579 aa14.18□□□□□ -0.14
PABPC1-216ENST00000520868 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.18□□□□□ -0.14
PABPC1-216ENST00000520868 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
PABPC1-216ENST00000520868 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
PABPC1-216ENST00000520868 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
PABPC1-216ENST00000520868 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-216ENST00000520868 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-216ENST00000520868 CHGAP10645 457 aaKnown RBP14.12□□□□□ -0.15
PABPC1-216ENST00000520868 NLRP6P59044 892 aa14.12□□□□□ -0.15
PABPC1-216ENST00000520868 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
PABPC1-216ENST00000520868 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
PABPC1-216ENST00000520868 TMEM121BQ9BXQ6 578 aaPredicted RBP14.1□□□□□ -0.15
PABPC1-216ENST00000520868 G3V3G9 751 aa14.09□□□□□ -0.15
PABPC1-216ENST00000520868 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
PABPC1-216ENST00000520868 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
PABPC1-216ENST00000520868 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
PABPC1-216ENST00000520868 PPP1R37O75864 691 aa14.01□□□□□ -0.17
PABPC1-216ENST00000520868 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-216ENST00000520868 POTEMA6NI47 508 aa13.99□□□□□ -0.17
PABPC1-216ENST00000520868 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
PABPC1-216ENST00000520868 ST18O60284 1047 aa13.98□□□□□ -0.17
PABPC1-216ENST00000520868 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
PABPC1-216ENST00000520868 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms