RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
PABPC1-214ENST00000520142 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
PABPC1-214ENST00000520142 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
PABPC1-214ENST00000520142 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
PABPC1-214ENST00000520142 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
PABPC1-214ENST00000520142 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
PABPC1-214ENST00000520142 EEA1Q15075 1411 aa18.74■□□□□ 0.59
PABPC1-214ENST00000520142 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
PABPC1-214ENST00000520142 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
PABPC1-214ENST00000520142 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
PABPC1-214ENST00000520142 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
PABPC1-214ENST00000520142 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
PABPC1-214ENST00000520142 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
PABPC1-214ENST00000520142 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
PABPC1-214ENST00000520142 PTPRGP23470 1445 aa18.59■□□□□ 0.57
PABPC1-214ENST00000520142 KIAA0556O60303 1618 aa18.59■□□□□ 0.57
PABPC1-214ENST00000520142 ADCY10Q96PN6 1610 aa18.59■□□□□ 0.57
PABPC1-214ENST00000520142 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
PABPC1-214ENST00000520142 KIF21BO75037 1637 aa18.57■□□□□ 0.56
PABPC1-214ENST00000520142 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
PABPC1-214ENST00000520142 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
PABPC1-214ENST00000520142 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
PABPC1-214ENST00000520142 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
PABPC1-214ENST00000520142 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
PABPC1-214ENST00000520142 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
PABPC1-214ENST00000520142 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
PABPC1-214ENST00000520142 ABCC2Q92887 1545 aa18.47■□□□□ 0.55
PABPC1-214ENST00000520142 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
PABPC1-214ENST00000520142 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
PABPC1-214ENST00000520142 KDM5BQ9UGL1 1544 aa18.43■□□□□ 0.54
PABPC1-214ENST00000520142 ABCA8O94911 1581 aa18.42■□□□□ 0.54
PABPC1-214ENST00000520142 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
PABPC1-214ENST00000520142 PLB1Q6P1J6 1458 aa18.41■□□□□ 0.54
PABPC1-214ENST00000520142 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
PABPC1-214ENST00000520142 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
PABPC1-214ENST00000520142 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
PABPC1-214ENST00000520142 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
PABPC1-214ENST00000520142 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
PABPC1-214ENST00000520142 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.53
PABPC1-214ENST00000520142 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
PABPC1-214ENST00000520142 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
PABPC1-214ENST00000520142 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
PABPC1-214ENST00000520142 GLI2P10070 1586 aa18.29■□□□□ 0.52
PABPC1-214ENST00000520142 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
PABPC1-214ENST00000520142 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
PABPC1-214ENST00000520142 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
PABPC1-214ENST00000520142 RAPGEF6Q8TEU7 1601 aa18.26■□□□□ 0.51
PABPC1-214ENST00000520142 ATP10BO94823 1461 aa18.26■□□□□ 0.51
PABPC1-214ENST00000520142 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
PABPC1-214ENST00000520142 WDR7Q9Y4E6 1490 aa18.24■□□□□ 0.51
PABPC1-214ENST00000520142 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
PABPC1-214ENST00000520142 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
PABPC1-214ENST00000520142 MAP3K4Q9Y6R4 1608 aa18.18■□□□□ 0.5
PABPC1-214ENST00000520142 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
PABPC1-214ENST00000520142 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
PABPC1-214ENST00000520142 TSPOAP1O95153 1857 aa18.12■□□□□ 0.49
PABPC1-214ENST00000520142 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
PABPC1-214ENST00000520142 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
PABPC1-214ENST00000520142 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.49
PABPC1-214ENST00000520142 CLIP1P30622 1438 aa18.08■□□□□ 0.49
PABPC1-214ENST00000520142 CD109Q6YHK3 1445 aa18.06■□□□□ 0.48
PABPC1-214ENST00000520142 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
PABPC1-214ENST00000520142 ABCA9Q8IUA7 1624 aa18.06■□□□□ 0.48
PABPC1-214ENST00000520142 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
PABPC1-214ENST00000520142 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
PABPC1-214ENST00000520142 KDM6BO15054 1643 aa18.05■□□□□ 0.48
PABPC1-214ENST00000520142 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-214ENST00000520142 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
PABPC1-214ENST00000520142 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
PABPC1-214ENST00000520142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
PABPC1-214ENST00000520142 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
PABPC1-214ENST00000520142 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
PABPC1-214ENST00000520142 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
PABPC1-214ENST00000520142 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
PABPC1-214ENST00000520142 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
PABPC1-214ENST00000520142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.477e-8■□□□□ 10.3
PABPC1-214ENST00000520142 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
PABPC1-214ENST00000520142 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
PABPC1-214ENST00000520142 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
PABPC1-214ENST00000520142 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
PABPC1-214ENST00000520142 TTC37Q6PGP7 1564 aa17.93■□□□□ 0.46
PABPC1-214ENST00000520142 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
PABPC1-214ENST00000520142 PHLDB1Q86UU1 1377 aa17.92■□□□□ 0.46
PABPC1-214ENST00000520142 NEO1Q92859 1461 aa17.92■□□□□ 0.46
PABPC1-214ENST00000520142 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-214ENST00000520142 KIF14Q15058 1648 aa17.88■□□□□ 0.45
PABPC1-214ENST00000520142 PLCH2O75038 1416 aa17.87■□□□□ 0.45
PABPC1-214ENST00000520142 FANCAO15360 1455 aa17.84■□□□□ 0.45
PABPC1-214ENST00000520142 AKNAQ7Z591 1439 aa17.82■□□□□ 0.44
PABPC1-214ENST00000520142 FRMPD1Q5SYB0 1578 aa17.81■□□□□ 0.44
PABPC1-214ENST00000520142 CFAP74Q9C0B2 1584 aa17.8■□□□□ 0.44
PABPC1-214ENST00000520142 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
PABPC1-214ENST00000520142 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
PABPC1-214ENST00000520142 RAPGEF3O95398 923 aa17.78■□□□□ 0.44
PABPC1-214ENST00000520142 DENND4BO75064 1496 aaPredicted RBP17.76■□□□□ 0.43
PABPC1-214ENST00000520142 RICTORQ6R327 1708 aa17.76■□□□□ 0.43
PABPC1-214ENST00000520142 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
PABPC1-214ENST00000520142 PREX2Q70Z35 1606 aa17.75■□□□□ 0.43
PABPC1-214ENST00000520142 CDC42BPBQ9Y5S2 1711 aa17.75■□□□□ 0.43
PABPC1-214ENST00000520142 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms