RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
PABPC1-213ENST00000519848 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
PABPC1-213ENST00000519848 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
PABPC1-213ENST00000519848 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
PABPC1-213ENST00000519848 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
PABPC1-213ENST00000519848 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
PABPC1-213ENST00000519848 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
PABPC1-213ENST00000519848 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
PABPC1-213ENST00000519848 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-213ENST00000519848 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
PABPC1-213ENST00000519848 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
PABPC1-213ENST00000519848 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
PABPC1-213ENST00000519848 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
PABPC1-213ENST00000519848 FBLN2P98095 1184 aa15.73■□□□□ 0.11
PABPC1-213ENST00000519848 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
PABPC1-213ENST00000519848 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
PABPC1-213ENST00000519848 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
PABPC1-213ENST00000519848 CEP170Q5SW79 1584 aa15.68■□□□□ 0.1
PABPC1-213ENST00000519848 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
PABPC1-213ENST00000519848 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
PABPC1-213ENST00000519848 ABCB7O75027 752 aa15.62■□□□□ 0.09
PABPC1-213ENST00000519848 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-213ENST00000519848 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-213ENST00000519848 NUP160Q12769 1436 aa15.6■□□□□ 0.09
PABPC1-213ENST00000519848 SHROOM2Q13796 1616 aa15.58■□□□□ 0.09
PABPC1-213ENST00000519848 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
PABPC1-213ENST00000519848 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
PABPC1-213ENST00000519848 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
PABPC1-213ENST00000519848 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.07
PABPC1-213ENST00000519848 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-213ENST00000519848 APLP2Q06481 763 aa15.42■□□□□ 0.06
PABPC1-213ENST00000519848 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-213ENST00000519848 IGF1RP08069 1367 aa15.36■□□□□ 0.05
PABPC1-213ENST00000519848 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
PABPC1-213ENST00000519848 CUL7Q14999 1698 aa15.36■□□□□ 0.05
PABPC1-213ENST00000519848 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
PABPC1-213ENST00000519848 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
PABPC1-213ENST00000519848 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
PABPC1-213ENST00000519848 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
PABPC1-213ENST00000519848 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
PABPC1-213ENST00000519848 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
PABPC1-213ENST00000519848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-213ENST00000519848 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
PABPC1-213ENST00000519848 DIP2BQ9P265 1576 aa15.22■□□□□ 0.03
PABPC1-213ENST00000519848 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
PABPC1-213ENST00000519848 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
PABPC1-213ENST00000519848 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
PABPC1-213ENST00000519848 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
PABPC1-213ENST00000519848 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-213ENST00000519848 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-213ENST00000519848 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
PABPC1-213ENST00000519848 KIAA0556O60303 1618 aa15.12■□□□□ 0.01
PABPC1-213ENST00000519848 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
PABPC1-213ENST00000519848 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
PABPC1-213ENST00000519848 KCNA4P22459 653 aa15.11■□□□□ 0.01
PABPC1-213ENST00000519848 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
PABPC1-213ENST00000519848 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
PABPC1-213ENST00000519848 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
PABPC1-213ENST00000519848 TSPOAP1O95153 1857 aa15.08■□□□□ 0.01
PABPC1-213ENST00000519848 PTPRGP23470 1445 aa15.06■□□□□ 0
PABPC1-213ENST00000519848 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
PABPC1-213ENST00000519848 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
PABPC1-213ENST00000519848 PRXQ9BXM0 1461 aa15.05■□□□□ -0
PABPC1-213ENST00000519848 ZCCHC11Q5TAX3 1644 aaKnown RBP15.04■□□□□ -0
PABPC1-213ENST00000519848 POLA2Q14181 598 aa15.04■□□□□ -0
PABPC1-213ENST00000519848 UHRF1BP1LA0JNW5 1464 aa15.03■□□□□ -0
PABPC1-213ENST00000519848 FAM69CQ0P6D2 419 aa15.02■□□□□ -0
PABPC1-213ENST00000519848 ASXL2Q76L83 1435 aa15.01□□□□□ -0.01
PABPC1-213ENST00000519848 KDM5BQ9UGL1 1544 aa15□□□□□ -0.01
PABPC1-213ENST00000519848 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
PABPC1-213ENST00000519848 UACAQ9BZF9 1416 aa15□□□□□ -0.01
PABPC1-213ENST00000519848 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
PABPC1-213ENST00000519848 KDM6BO15054 1643 aa14.99□□□□□ -0.01
PABPC1-213ENST00000519848 ABCA8O94911 1581 aa14.98□□□□□ -0.01
PABPC1-213ENST00000519848 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
PABPC1-213ENST00000519848 GLI2P10070 1586 aa14.97□□□□□ -0.01
PABPC1-213ENST00000519848 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
PABPC1-213ENST00000519848 EPRSP07814 1512 aaKnown RBP14.94□□□□□ -0.02
PABPC1-213ENST00000519848 SAMD9Q5K651 1589 aa14.91□□□□□ -0.02
PABPC1-213ENST00000519848 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
PABPC1-213ENST00000519848 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
PABPC1-213ENST00000519848 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
PABPC1-213ENST00000519848 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
PABPC1-213ENST00000519848 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
PABPC1-213ENST00000519848 KDM4FA0A1W2PPD8 638 aa14.82□□□□□ -0.04
PABPC1-213ENST00000519848 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
PABPC1-213ENST00000519848 ATP10BO94823 1461 aa14.79□□□□□ -0.04
PABPC1-213ENST00000519848 MYCNP04198 464 aaPredicted RBP14.79□□□□□ -0.04
PABPC1-213ENST00000519848 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
PABPC1-213ENST00000519848 KIF21BO75037 1637 aa14.78□□□□□ -0.04
PABPC1-213ENST00000519848 RAPGEF6Q8TEU7 1601 aa14.78□□□□□ -0.04
PABPC1-213ENST00000519848 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
PABPC1-213ENST00000519848 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
PABPC1-213ENST00000519848 NUP153P49790 1475 aaKnown RBP14.76□□□□□ -0.05
PABPC1-213ENST00000519848 FHOD3Q2V2M9 1422 aa14.76□□□□□ -0.05
PABPC1-213ENST00000519848 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
PABPC1-213ENST00000519848 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
PABPC1-213ENST00000519848 ADGRL1O94910 1474 aa14.74□□□□□ -0.05
PABPC1-213ENST00000519848 ABCA9Q8IUA7 1624 aa14.74□□□□□ -0.05
PABPC1-213ENST00000519848 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms