RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 TSHZ2Q9NRE2 1034 aa34.02■■■■□ 3.04
KCNQ3-202ENST00000519445 PRKCSHP14314 528 aaPredicted RBP34.01■■■■□ 3.04
KCNQ3-202ENST00000519445 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
KCNQ3-202ENST00000519445 TOPBP1Q92547 1522 aa34■■■■□ 3.03
KCNQ3-202ENST00000519445 SUPT16HQ9Y5B9 1047 aaKnown RBP33.96■■■■□ 3.03
KCNQ3-202ENST00000519445 FHOD3Q2V2M9 1422 aa33.95■■■■□ 3.03
KCNQ3-202ENST00000519445 DHX57Q6P158 1386 aaKnown RBP33.95■■■■□ 3.03
KCNQ3-202ENST00000519445 FAM50AQ14320 339 aaKnown RBP33.94■■■■□ 3.02
KCNQ3-202ENST00000519445 CCNB3Q8WWL7 1395 aa33.93■■■■□ 3.02
KCNQ3-202ENST00000519445 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
KCNQ3-202ENST00000519445 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
KCNQ3-202ENST00000519445 RRBP1Q9P2E9 1410 aaKnown RBP33.84■■■■□ 3.01
KCNQ3-202ENST00000519445 PHLDB1Q86UU1 1377 aa33.82■■■■□ 3
KCNQ3-202ENST00000519445 ABCA10Q8WWZ4 1543 aa33.78■■■■□ 3
KCNQ3-202ENST00000519445 TIAM1Q13009 1591 aa33.73■■■□□ 2.99
KCNQ3-202ENST00000519445 ARID3CA6NKF2 412 aa33.71■■■□□ 2.99
KCNQ3-202ENST00000519445 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
KCNQ3-202ENST00000519445 LRRC9Q6ZRR7 1453 aa33.69■■■□□ 2.98
KCNQ3-202ENST00000519445 RAB3GAP2Q9H2M9 1393 aa33.68■■■□□ 2.98
KCNQ3-202ENST00000519445 SIN3AQ96ST3 1273 aa33.6■■■□□ 2.97
KCNQ3-202ENST00000519445 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
KCNQ3-202ENST00000519445 LAMC3Q9Y6N6 1575 aa33.56■■■□□ 2.96
KCNQ3-202ENST00000519445 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
KCNQ3-202ENST00000519445 PDS5BQ9NTI5 1447 aa33.55■■■□□ 2.96
KCNQ3-202ENST00000519445 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
KCNQ3-202ENST00000519445 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.95
KCNQ3-202ENST00000519445 BCANQ96GW7 911 aa33.48■■■□□ 2.95
KCNQ3-202ENST00000519445 CLSPNQ9HAW4 1339 aa33.41■■■□□ 2.94
KCNQ3-202ENST00000519445 SETD5Q9C0A6 1442 aa33.41■■■□□ 2.94
KCNQ3-202ENST00000519445 HIRIP3Q9BW71 556 aaPredicted RBP33.41■■■□□ 2.94
KCNQ3-202ENST00000519445 MTUS2Q5JR59 1369 aa33.39■■■□□ 2.94
KCNQ3-202ENST00000519445 CUL7Q14999 1698 aa33.39■■■□□ 2.94
KCNQ3-202ENST00000519445 CASKIN1Q8WXD9 1431 aa33.38■■■□□ 2.93
KCNQ3-202ENST00000519445 WDR97A6NE52 1622 aa33.35■■■□□ 2.93
KCNQ3-202ENST00000519445 MAP3K1Q13233 1512 aa33.35■■■□□ 2.93
KCNQ3-202ENST00000519445 CTTNBP2Q8WZ74 1663 aa33.35■■■□□ 2.93
KCNQ3-202ENST00000519445 MAPKBP1O60336 1514 aa33.34■■■□□ 2.93
KCNQ3-202ENST00000519445 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
KCNQ3-202ENST00000519445 FYCO1Q9BQS8 1478 aa33.33■■■□□ 2.93
KCNQ3-202ENST00000519445 CFAP43Q8NDM7 1665 aa33.31■■■□□ 2.92
KCNQ3-202ENST00000519445 CHIC2Q9UKJ5 165 aa33.29■■■□□ 2.92
KCNQ3-202ENST00000519445 FMN1Q68DA7 1419 aa33.28■■■□□ 2.92
KCNQ3-202ENST00000519445 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
KCNQ3-202ENST00000519445 EFCAB5A4FU69 1503 aa33.27■■■□□ 2.92
KCNQ3-202ENST00000519445 PTPRKQ15262 1439 aa33.21■■■□□ 2.91
KCNQ3-202ENST00000519445 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
KCNQ3-202ENST00000519445 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
KCNQ3-202ENST00000519445 FGD6Q6ZV73 1430 aa33.19■■■□□ 2.9
KCNQ3-202ENST00000519445 KCNH8Q96L42 1107 aa33.18■■■□□ 2.9
KCNQ3-202ENST00000519445 RRP7BPQ9NSQ0 103 aa33.17■■■□□ 2.9
KCNQ3-202ENST00000519445 LRRIQ1Q96JM4 1722 aa33.16■■■□□ 2.9
KCNQ3-202ENST00000519445 RBM19Q9Y4C8 960 aaKnown RBP33.15■■■□□ 2.9
KCNQ3-202ENST00000519445 FBLN2P98095 1184 aa33.12■■■□□ 2.89
KCNQ3-202ENST00000519445 NCOA2Q15596 1464 aa33.1■■■□□ 2.89
KCNQ3-202ENST00000519445 SAMD9Q5K651 1589 aa33.08■■■□□ 2.89
KCNQ3-202ENST00000519445 DDX10Q13206 875 aaKnown RBP33.07■■■□□ 2.89
KCNQ3-202ENST00000519445 GRIN2BQ13224 1484 aa33.07■■■□□ 2.88
KCNQ3-202ENST00000519445 MAGI3Q5TCQ9 1506 aa33.06■■■□□ 2.88
KCNQ3-202ENST00000519445 MRC2Q9UBG0 1479 aa33.04■■■□□ 2.88
KCNQ3-202ENST00000519445 FKBP8Q14318 412 aa33.02■■■□□ 2.88
KCNQ3-202ENST00000519445 CDK13Q14004 1512 aaKnown RBP33.02■■■□□ 2.88
KCNQ3-202ENST00000519445 MSH5O43196 834 aa32.99■■■□□ 2.87
KCNQ3-202ENST00000519445 PBRM1Q86U86 1689 aa32.98■■■□□ 2.87
KCNQ3-202ENST00000519445 MYOM3Q5VTT5 1437 aa32.96■■■□□ 2.87
KCNQ3-202ENST00000519445 CCDC18Q5T9S5 1454 aa32.95■■■□□ 2.87
KCNQ3-202ENST00000519445 TRIM52Q96A61 297 aa32.94■■■□□ 2.86
KCNQ3-202ENST00000519445 FOXD1Q16676 465 aa32.93■■■□□ 2.86
KCNQ3-202ENST00000519445 ERICH6Q7L0X2 663 aa32.92■■■□□ 2.86
KCNQ3-202ENST00000519445 IQGAP2Q13576 1575 aa32.9■■■□□ 2.86
KCNQ3-202ENST00000519445 PPP1R15AO75807 674 aaPredicted RBP32.89■■■□□ 2.86
KCNQ3-202ENST00000519445 ADAMTS12P58397 1594 aa32.89■■■□□ 2.86
KCNQ3-202ENST00000519445 ZNF644Q9H582 1327 aaPredicted RBP32.88■■■□□ 2.85
KCNQ3-202ENST00000519445 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
KCNQ3-202ENST00000519445 NAIPQ13075 1403 aa32.86■■■□□ 2.85
KCNQ3-202ENST00000519445 ANO8Q9HCE9 1232 aaPredicted RBP32.84■■■□□ 2.85
KCNQ3-202ENST00000519445 EPRSP07814 1512 aaKnown RBP32.84■■■□□ 2.85
KCNQ3-202ENST00000519445 CHMP7Q8WUX9 453 aaPredicted RBP32.83■■■□□ 2.85
KCNQ3-202ENST00000519445 TONSLQ96HA7 1378 aa32.82■■■□□ 2.84
KCNQ3-202ENST00000519445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.81■■■□□ 2.84
KCNQ3-202ENST00000519445 HFM1A2PYH4 1435 aa32.81■■■□□ 2.84
KCNQ3-202ENST00000519445 SUPT6HQ7KZ85 1726 aaKnown RBP32.81■■■□□ 2.84
KCNQ3-202ENST00000519445 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
KCNQ3-202ENST00000519445 EHBP1L1Q8N3D4 1523 aa32.78■■■□□ 2.84
KCNQ3-202ENST00000519445 PTPN23Q9H3S7 1636 aa32.78■■■□□ 2.84
KCNQ3-202ENST00000519445 UGGT2Q9NYU1 1516 aa32.76■■■□□ 2.84
KCNQ3-202ENST00000519445 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
KCNQ3-202ENST00000519445 ZNF777Q9ULD5 760 aaPredicted RBP32.72■■■□□ 2.83
KCNQ3-202ENST00000519445 UACAQ9BZF9 1416 aa32.71■■■□□ 2.83
KCNQ3-202ENST00000519445 KDM6BO15054 1643 aa32.69■■■□□ 2.82
KCNQ3-202ENST00000519445 HECW1Q76N89 1606 aa32.68■■■□□ 2.82
KCNQ3-202ENST00000519445 DISP1Q96F81 1524 aa32.67■■■□□ 2.82
KCNQ3-202ENST00000519445 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
KCNQ3-202ENST00000519445 WDR62O43379 1518 aa32.65■■■□□ 2.82
KCNQ3-202ENST00000519445 GRIN2AQ12879 1464 aa32.63■■■□□ 2.81
KCNQ3-202ENST00000519445 ARHGEF11O15085 1522 aa32.62■■■□□ 2.81
KCNQ3-202ENST00000519445 DEKP35659 375 aaKnown RBP32.6■■■□□ 2.81
KCNQ3-202ENST00000519445 KIAA0586Q9BVV6 1533 aa32.6■■■□□ 2.81
KCNQ3-202ENST00000519445 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
KCNQ3-202ENST00000519445 PLB1Q6P1J6 1458 aa32.59■■■□□ 2.81
KCNQ3-202ENST00000519445 NUP153P49790 1475 aaKnown RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms