RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 TIAM1Q13009 1591 aa26.2■■□□□ 1.78
ARFGAP1-209ENST00000518794 SIN3AQ96ST3 1273 aa26.19■■□□□ 1.78
ARFGAP1-209ENST00000518794 MAPKBP1O60336 1514 aa26.16■■□□□ 1.78
ARFGAP1-209ENST00000518794 LRRC9Q6ZRR7 1453 aa26.15■■□□□ 1.78
ARFGAP1-209ENST00000518794 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
ARFGAP1-209ENST00000518794 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
ARFGAP1-209ENST00000518794 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
ARFGAP1-209ENST00000518794 FHOD3Q2V2M9 1422 aa26.1■■□□□ 1.77
ARFGAP1-209ENST00000518794 ANP32EQ9BTT0 268 aa26.08■■□□□ 1.76
ARFGAP1-209ENST00000518794 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
ARFGAP1-209ENST00000518794 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
ARFGAP1-209ENST00000518794 SUPT16HQ9Y5B9 1047 aaKnown RBP26.06■■□□□ 1.76
ARFGAP1-209ENST00000518794 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
ARFGAP1-209ENST00000518794 FANCD2Q9BXW9 1451 aa26.05■■□□□ 1.76
ARFGAP1-209ENST00000518794 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.76
ARFGAP1-209ENST00000518794 MAP3K1Q13233 1512 aa26■■□□□ 1.75
ARFGAP1-209ENST00000518794 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
ARFGAP1-209ENST00000518794 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
ARFGAP1-209ENST00000518794 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
ARFGAP1-209ENST00000518794 NESP48681 1621 aa25.97■■□□□ 1.75
ARFGAP1-209ENST00000518794 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
ARFGAP1-209ENST00000518794 CFAP43Q8NDM7 1665 aa25.89■■□□□ 1.73
ARFGAP1-209ENST00000518794 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
ARFGAP1-209ENST00000518794 ABCA10Q8WWZ4 1543 aa25.84■■□□□ 1.73
ARFGAP1-209ENST00000518794 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
ARFGAP1-209ENST00000518794 BCANQ96GW7 911 aa25.82■■□□□ 1.72
ARFGAP1-209ENST00000518794 CASKIN1Q8WXD9 1431 aa25.81■■□□□ 1.72
ARFGAP1-209ENST00000518794 FYCO1Q9BQS8 1478 aa25.81■■□□□ 1.72
ARFGAP1-209ENST00000518794 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
ARFGAP1-209ENST00000518794 PRKCSHP14314 528 aaPredicted RBP25.79■■□□□ 1.72
ARFGAP1-209ENST00000518794 TSHZ2Q9NRE2 1034 aa25.79■■□□□ 1.72
ARFGAP1-209ENST00000518794 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
ARFGAP1-209ENST00000518794 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
ARFGAP1-209ENST00000518794 PTPRKQ15262 1439 aa25.74■■□□□ 1.71
ARFGAP1-209ENST00000518794 FGD6Q6ZV73 1430 aa25.74■■□□□ 1.71
ARFGAP1-209ENST00000518794 EFCAB5A4FU69 1503 aa25.72■■□□□ 1.71
ARFGAP1-209ENST00000518794 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
ARFGAP1-209ENST00000518794 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
ARFGAP1-209ENST00000518794 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
ARFGAP1-209ENST00000518794 FMN1Q68DA7 1419 aa25.68■■□□□ 1.7
ARFGAP1-209ENST00000518794 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
ARFGAP1-209ENST00000518794 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
ARFGAP1-209ENST00000518794 AQRO60306 1485 aaKnown RBP eCLIP25.67■■□□□ 1.73e-7■■■□□ 14.6
ARFGAP1-209ENST00000518794 CTTNBP2Q8WZ74 1663 aa25.66■■□□□ 1.7
ARFGAP1-209ENST00000518794 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
ARFGAP1-209ENST00000518794 FKBP8Q14318 412 aa25.65■■□□□ 1.7
ARFGAP1-209ENST00000518794 CUL7Q14999 1698 aa25.65■■□□□ 1.7
ARFGAP1-209ENST00000518794 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
ARFGAP1-209ENST00000518794 TIMELESSQ9UNS1 1208 aa25.63■■□□□ 1.69
ARFGAP1-209ENST00000518794 CHIC2Q9UKJ5 165 aa25.63■■□□□ 1.69
ARFGAP1-209ENST00000518794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.694e-10■■□□□ 12.4
ARFGAP1-209ENST00000518794 ANP32CO43423 234 aa25.6■■□□□ 1.69
ARFGAP1-209ENST00000518794 RRP7BPQ9NSQ0 103 aa25.6■■□□□ 1.69
ARFGAP1-209ENST00000518794 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
ARFGAP1-209ENST00000518794 LRRIQ1Q96JM4 1722 aa25.57■■□□□ 1.68
ARFGAP1-209ENST00000518794 HFM1A2PYH4 1435 aa25.56■■□□□ 1.68
ARFGAP1-209ENST00000518794 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
ARFGAP1-209ENST00000518794 NAIPQ13075 1403 aa25.55■■□□□ 1.68
ARFGAP1-209ENST00000518794 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
ARFGAP1-209ENST00000518794 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
ARFGAP1-209ENST00000518794 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
ARFGAP1-209ENST00000518794 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
ARFGAP1-209ENST00000518794 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
ARFGAP1-209ENST00000518794 ABCA5Q8WWZ7 1642 aa25.47■■□□□ 1.67
ARFGAP1-209ENST00000518794 MAGI3Q5TCQ9 1506 aa25.47■■□□□ 1.67
ARFGAP1-209ENST00000518794 CCER2I3L3R5 266 aa25.47■■□□□ 1.67
ARFGAP1-209ENST00000518794 FOXD1Q16676 465 aa25.43■■□□□ 1.66
ARFGAP1-209ENST00000518794 LAMC3Q9Y6N6 1575 aa25.41■■□□□ 1.66
ARFGAP1-209ENST00000518794 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
ARFGAP1-209ENST00000518794 NEFLP07196 543 aa25.39■■□□□ 1.65
ARFGAP1-209ENST00000518794 EHBP1L1Q8N3D4 1523 aa25.38■■□□□ 1.65
ARFGAP1-209ENST00000518794 KDM5BQ9UGL1 1544 aa25.38■■□□□ 1.65
ARFGAP1-209ENST00000518794 UGGT2Q9NYU1 1516 aa25.36■■□□□ 1.65
ARFGAP1-209ENST00000518794 HSPA5P11021 654 aaKnown RBP25.36■■□□□ 1.65
ARFGAP1-209ENST00000518794 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
ARFGAP1-209ENST00000518794 KDM6BO15054 1643 aa25.34■■□□□ 1.65
ARFGAP1-209ENST00000518794 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
ARFGAP1-209ENST00000518794 WASHC2AQ641Q2 1341 aa25.33■■□□□ 1.65
ARFGAP1-209ENST00000518794 CDK13Q14004 1512 aaKnown RBP25.33■■□□□ 1.65
ARFGAP1-209ENST00000518794 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
ARFGAP1-209ENST00000518794 HNRNPUQ00839 825 aaKnown RBP eCLIP25.31■■□□□ 1.64
ARFGAP1-209ENST00000518794 IRX6P78412 446 aaPredicted RBP25.3■■□□□ 1.64
ARFGAP1-209ENST00000518794 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
ARFGAP1-209ENST00000518794 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
ARFGAP1-209ENST00000518794 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
ARFGAP1-209ENST00000518794 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
ARFGAP1-209ENST00000518794 EPRSP07814 1512 aaKnown RBP25.26■■□□□ 1.63
ARFGAP1-209ENST00000518794 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
ARFGAP1-209ENST00000518794 CCDC184Q52MB2 194 aa25.25■■□□□ 1.63
ARFGAP1-209ENST00000518794 C11orf95C9JLR9 678 aaPredicted RBP25.23■■□□□ 1.63
ARFGAP1-209ENST00000518794 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
ARFGAP1-209ENST00000518794 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.63
ARFGAP1-209ENST00000518794 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
ARFGAP1-209ENST00000518794 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
ARFGAP1-209ENST00000518794 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
ARFGAP1-209ENST00000518794 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
ARFGAP1-209ENST00000518794 NBPF8Q3BBV2 869 aa25.15■■□□□ 1.62
ARFGAP1-209ENST00000518794 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.62
ARFGAP1-209ENST00000518794 CNGB1Q14028 1251 aaPredicted RBP25.14■■□□□ 1.62
ARFGAP1-209ENST00000518794 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms