RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 LOC105371045A0A1W2PR82 267 aa17.87■□□□□ 0.45
SPIDR-206ENST00000518074 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
SPIDR-206ENST00000518074 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
SPIDR-206ENST00000518074 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
SPIDR-206ENST00000518074 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
SPIDR-206ENST00000518074 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
SPIDR-206ENST00000518074 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
SPIDR-206ENST00000518074 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.42
SPIDR-206ENST00000518074 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
SPIDR-206ENST00000518074 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
SPIDR-206ENST00000518074 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
SPIDR-206ENST00000518074 PCGF6Q9BYE7 350 aa17.65■□□□□ 0.42
SPIDR-206ENST00000518074 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-206ENST00000518074 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
SPIDR-206ENST00000518074 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
SPIDR-206ENST00000518074 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
SPIDR-206ENST00000518074 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
SPIDR-206ENST00000518074 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
SPIDR-206ENST00000518074 ADCY10Q96PN6 1610 aa17.53■□□□□ 0.4
SPIDR-206ENST00000518074 MAPKBP1O60336 1514 aa17.52■□□□□ 0.4
SPIDR-206ENST00000518074 TTBK1Q5TCY1 1321 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-206ENST00000518074 PTPRGP23470 1445 aa17.52■□□□□ 0.39
SPIDR-206ENST00000518074 EEA1Q15075 1411 aa17.51■□□□□ 0.39
SPIDR-206ENST00000518074 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
SPIDR-206ENST00000518074 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
SPIDR-206ENST00000518074 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPIDR-206ENST00000518074 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
SPIDR-206ENST00000518074 KIF13AQ9H1H9 1805 aa17.45■□□□□ 0.38
SPIDR-206ENST00000518074 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
SPIDR-206ENST00000518074 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
SPIDR-206ENST00000518074 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
SPIDR-206ENST00000518074 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
SPIDR-206ENST00000518074 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
SPIDR-206ENST00000518074 UACAQ9BZF9 1416 aa17.42■□□□□ 0.38
SPIDR-206ENST00000518074 DIP2BQ9P265 1576 aa17.39■□□□□ 0.37
SPIDR-206ENST00000518074 KDM5BQ9UGL1 1544 aa17.36■□□□□ 0.37
SPIDR-206ENST00000518074 PLB1Q6P1J6 1458 aa17.35■□□□□ 0.37
SPIDR-206ENST00000518074 GLI2P10070 1586 aa17.33■□□□□ 0.37
SPIDR-206ENST00000518074 HRCP23327 699 aa17.33■□□□□ 0.36
SPIDR-206ENST00000518074 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
SPIDR-206ENST00000518074 KIF21BO75037 1637 aa17.31■□□□□ 0.36
SPIDR-206ENST00000518074 ABCA8O94911 1581 aa17.3■□□□□ 0.36
SPIDR-206ENST00000518074 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
SPIDR-206ENST00000518074 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
SPIDR-206ENST00000518074 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
SPIDR-206ENST00000518074 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
SPIDR-206ENST00000518074 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
SPIDR-206ENST00000518074 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
SPIDR-206ENST00000518074 TRIM26Q12899 539 aaPredicted RBP17.2■□□□□ 0.34
SPIDR-206ENST00000518074 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
SPIDR-206ENST00000518074 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
SPIDR-206ENST00000518074 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
SPIDR-206ENST00000518074 PPRC1Q5VV67 1664 aaKnown RBP17.17■□□□□ 0.34
SPIDR-206ENST00000518074 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
SPIDR-206ENST00000518074 KDM6BO15054 1643 aa17.15■□□□□ 0.34
SPIDR-206ENST00000518074 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
SPIDR-206ENST00000518074 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.33
SPIDR-206ENST00000518074 CFAP43Q8NDM7 1665 aa17.12■□□□□ 0.33
SPIDR-206ENST00000518074 ATP10BO94823 1461 aa17.12■□□□□ 0.33
SPIDR-206ENST00000518074 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
SPIDR-206ENST00000518074 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
SPIDR-206ENST00000518074 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
SPIDR-206ENST00000518074 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
SPIDR-206ENST00000518074 CD109Q6YHK3 1445 aa17.05■□□□□ 0.32
SPIDR-206ENST00000518074 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
SPIDR-206ENST00000518074 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
SPIDR-206ENST00000518074 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
SPIDR-206ENST00000518074 FMN1Q68DA7 1419 aa17■□□□□ 0.31
SPIDR-206ENST00000518074 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
SPIDR-206ENST00000518074 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
SPIDR-206ENST00000518074 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
SPIDR-206ENST00000518074 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
SPIDR-206ENST00000518074 APLP2Q06481 763 aa16.95■□□□□ 0.3
SPIDR-206ENST00000518074 AEBP2Q6ZN18 517 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-206ENST00000518074 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
SPIDR-206ENST00000518074 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
SPIDR-206ENST00000518074 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
SPIDR-206ENST00000518074 NEO1Q92859 1461 aa16.93■□□□□ 0.3
SPIDR-206ENST00000518074 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
SPIDR-206ENST00000518074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-206ENST00000518074 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
SPIDR-206ENST00000518074 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
SPIDR-206ENST00000518074 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
SPIDR-206ENST00000518074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPIDR-206ENST00000518074 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-206ENST00000518074 CDK13Q14004 1512 aaKnown RBP16.85■□□□□ 0.29
SPIDR-206ENST00000518074 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
SPIDR-206ENST00000518074 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
SPIDR-206ENST00000518074 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
SPIDR-206ENST00000518074 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
SPIDR-206ENST00000518074 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
SPIDR-206ENST00000518074 CLIP1P30622 1438 aa16.79■□□□□ 0.28
SPIDR-206ENST00000518074 TROQ12816 1431 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-206ENST00000518074 PLCH2O75038 1416 aa16.79■□□□□ 0.28
SPIDR-206ENST00000518074 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
SPIDR-206ENST00000518074 AKNAQ7Z591 1439 aa16.78■□□□□ 0.28
SPIDR-206ENST00000518074 FANCAO15360 1455 aa16.78■□□□□ 0.28
SPIDR-206ENST00000518074 ADGRL1O94910 1474 aa16.78■□□□□ 0.28
SPIDR-206ENST00000518074 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.28
SPIDR-206ENST00000518074 KIF14Q15058 1648 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms