RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
SCARNA16-201ENST00000515981 ARHGEF11O15085 1522 aa16■□□□□ 0.15
SCARNA16-201ENST00000515981 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
SCARNA16-201ENST00000515981 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
SCARNA16-201ENST00000515981 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
SCARNA16-201ENST00000515981 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
SCARNA16-201ENST00000515981 PRG4Q92954 1404 aaPredicted RBP15.97■□□□□ 0.15
SCARNA16-201ENST00000515981 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
SCARNA16-201ENST00000515981 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
SCARNA16-201ENST00000515981 RANGAP1P46060 587 aaPredicted RBP15.96■□□□□ 0.15
SCARNA16-201ENST00000515981 KIF21BO75037 1637 aa15.94■□□□□ 0.14
SCARNA16-201ENST00000515981 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
SCARNA16-201ENST00000515981 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
SCARNA16-201ENST00000515981 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
SCARNA16-201ENST00000515981 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
SCARNA16-201ENST00000515981 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
SCARNA16-201ENST00000515981 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
SCARNA16-201ENST00000515981 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
SCARNA16-201ENST00000515981 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
SCARNA16-201ENST00000515981 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
SCARNA16-201ENST00000515981 UGGT2Q9NYU1 1516 aa15.85■□□□□ 0.13
SCARNA16-201ENST00000515981 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
SCARNA16-201ENST00000515981 PTPRGP23470 1445 aa15.81■□□□□ 0.12
SCARNA16-201ENST00000515981 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
SCARNA16-201ENST00000515981 KIAA0556O60303 1618 aa15.78■□□□□ 0.12
SCARNA16-201ENST00000515981 FHOD3Q2V2M9 1422 aa15.74■□□□□ 0.11
SCARNA16-201ENST00000515981 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
SCARNA16-201ENST00000515981 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
SCARNA16-201ENST00000515981 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
SCARNA16-201ENST00000515981 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
SCARNA16-201ENST00000515981 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
SCARNA16-201ENST00000515981 CLIP1P30622 1438 aa15.67■□□□□ 0.1
SCARNA16-201ENST00000515981 ADCY10Q96PN6 1610 aa15.66■□□□□ 0.1
SCARNA16-201ENST00000515981 EFCAB5A4FU69 1503 aa15.66■□□□□ 0.1
SCARNA16-201ENST00000515981 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCARNA16-201ENST00000515981 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
SCARNA16-201ENST00000515981 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
SCARNA16-201ENST00000515981 ABCA8O94911 1581 aa15.62■□□□□ 0.09
SCARNA16-201ENST00000515981 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
SCARNA16-201ENST00000515981 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
SCARNA16-201ENST00000515981 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
SCARNA16-201ENST00000515981 RAPGEF6Q8TEU7 1601 aa15.55■□□□□ 0.08
SCARNA16-201ENST00000515981 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
SCARNA16-201ENST00000515981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
SCARNA16-201ENST00000515981 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
SCARNA16-201ENST00000515981 ATP10BO94823 1461 aa15.54■□□□□ 0.08
SCARNA16-201ENST00000515981 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
SCARNA16-201ENST00000515981 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
SCARNA16-201ENST00000515981 ZCCHC11Q5TAX3 1644 aaKnown RBP15.52■□□□□ 0.08
SCARNA16-201ENST00000515981 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
SCARNA16-201ENST00000515981 KCNH8Q96L42 1107 aa15.5■□□□□ 0.07
SCARNA16-201ENST00000515981 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
SCARNA16-201ENST00000515981 CASKIN1Q8WXD9 1431 aa15.48■□□□□ 0.07
SCARNA16-201ENST00000515981 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
SCARNA16-201ENST00000515981 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
SCARNA16-201ENST00000515981 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
SCARNA16-201ENST00000515981 EPRSP07814 1512 aaKnown RBP15.44■□□□□ 0.06
SCARNA16-201ENST00000515981 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
SCARNA16-201ENST00000515981 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
SCARNA16-201ENST00000515981 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
SCARNA16-201ENST00000515981 WDR7Q9Y4E6 1490 aa15.42■□□□□ 0.06
SCARNA16-201ENST00000515981 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
SCARNA16-201ENST00000515981 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
SCARNA16-201ENST00000515981 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
SCARNA16-201ENST00000515981 KIF13AQ9H1H9 1805 aa15.4■□□□□ 0.06
SCARNA16-201ENST00000515981 DIP2BQ9P265 1576 aa15.39■□□□□ 0.05
SCARNA16-201ENST00000515981 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
SCARNA16-201ENST00000515981 CCDC18Q5T9S5 1454 aa15.34■□□□□ 0.05
SCARNA16-201ENST00000515981 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
SCARNA16-201ENST00000515981 MAGI3Q5TCQ9 1506 aa15.33■□□□□ 0.05
SCARNA16-201ENST00000515981 GLI2P10070 1586 aa15.33■□□□□ 0.05
SCARNA16-201ENST00000515981 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
SCARNA16-201ENST00000515981 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
SCARNA16-201ENST00000515981 CD109Q6YHK3 1445 aa15.3■□□□□ 0.04
SCARNA16-201ENST00000515981 KIF14Q15058 1648 aa15.28■□□□□ 0.04
SCARNA16-201ENST00000515981 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
SCARNA16-201ENST00000515981 APLP2Q06481 763 aa15.27■□□□□ 0.04
SCARNA16-201ENST00000515981 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
SCARNA16-201ENST00000515981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.03
SCARNA16-201ENST00000515981 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
SCARNA16-201ENST00000515981 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
SCARNA16-201ENST00000515981 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
SCARNA16-201ENST00000515981 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
SCARNA16-201ENST00000515981 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
SCARNA16-201ENST00000515981 CFAP43Q8NDM7 1665 aa15.23■□□□□ 0.03
SCARNA16-201ENST00000515981 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
SCARNA16-201ENST00000515981 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
SCARNA16-201ENST00000515981 PLCH2O75038 1416 aa15.19■□□□□ 0.02
SCARNA16-201ENST00000515981 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
SCARNA16-201ENST00000515981 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
SCARNA16-201ENST00000515981 TEX14Q8IWB6 1497 aa15.17■□□□□ 0.02
SCARNA16-201ENST00000515981 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
SCARNA16-201ENST00000515981 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
SCARNA16-201ENST00000515981 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
SCARNA16-201ENST00000515981 NCOA2Q15596 1464 aa15.16■□□□□ 0.02
SCARNA16-201ENST00000515981 GPATCH8Q9UKJ3 1502 aaKnown RBP15.16■□□□□ 0.02
SCARNA16-201ENST00000515981 FANCAO15360 1455 aa15.14■□□□□ 0.01
SCARNA16-201ENST00000515981 RAPGEF3O95398 923 aa15.14■□□□□ 0.01
SCARNA16-201ENST00000515981 CFDP1Q9UEE9 299 aaPredicted RBP15.14■□□□□ 0.01
SCARNA16-201ENST00000515981 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms