RNA–Protein interactions for RNA: ENST00000515749.1

SEC31A-241, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-241ENST00000515749 SOGA1O94964 1423 aa12.13□□□□□ -0.47
SEC31A-241ENST00000515749 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
SEC31A-241ENST00000515749 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
SEC31A-241ENST00000515749 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
SEC31A-241ENST00000515749 FBLN2P98095 1184 aa12.12□□□□□ -0.47
SEC31A-241ENST00000515749 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
SEC31A-241ENST00000515749 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
SEC31A-241ENST00000515749 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
SEC31A-241ENST00000515749 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
SEC31A-241ENST00000515749 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
SEC31A-241ENST00000515749 KIF21BO75037 1637 aa12.06□□□□□ -0.48
SEC31A-241ENST00000515749 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
SEC31A-241ENST00000515749 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
SEC31A-241ENST00000515749 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
SEC31A-241ENST00000515749 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
SEC31A-241ENST00000515749 TNIKQ9UKE5 1360 aa12.01□□□□□ -0.49
SEC31A-241ENST00000515749 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
SEC31A-241ENST00000515749 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
SEC31A-241ENST00000515749 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
SEC31A-241ENST00000515749 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
SEC31A-241ENST00000515749 CUX2O14529 1486 aa11.97□□□□□ -0.49
SEC31A-241ENST00000515749 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
SEC31A-241ENST00000515749 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
SEC31A-241ENST00000515749 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
SEC31A-241ENST00000515749 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
SEC31A-241ENST00000515749 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
SEC31A-241ENST00000515749 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
SEC31A-241ENST00000515749 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
SEC31A-241ENST00000515749 WDR62O43379 1518 aa11.94□□□□□ -0.5
SEC31A-241ENST00000515749 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
SEC31A-241ENST00000515749 IGF1RP08069 1367 aa11.92□□□□□ -0.5
SEC31A-241ENST00000515749 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
SEC31A-241ENST00000515749 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
SEC31A-241ENST00000515749 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
SEC31A-241ENST00000515749 TARBP1Q13395 1621 aaKnown RBP11.9□□□□□ -0.5
SEC31A-241ENST00000515749 CUL7Q14999 1698 aa11.9□□□□□ -0.5
SEC31A-241ENST00000515749 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
SEC31A-241ENST00000515749 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
SEC31A-241ENST00000515749 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
SEC31A-241ENST00000515749 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
SEC31A-241ENST00000515749 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
SEC31A-241ENST00000515749 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
SEC31A-241ENST00000515749 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
SEC31A-241ENST00000515749 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
SEC31A-241ENST00000515749 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
SEC31A-241ENST00000515749 CLIP1P30622 1438 aa11.82□□□□□ -0.52
SEC31A-241ENST00000515749 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
SEC31A-241ENST00000515749 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
SEC31A-241ENST00000515749 GRIN2BQ13224 1484 aa11.78□□□□□ -0.52
SEC31A-241ENST00000515749 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
SEC31A-241ENST00000515749 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
SEC31A-241ENST00000515749 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
SEC31A-241ENST00000515749 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
SEC31A-241ENST00000515749 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.532e-8■■□□□ 12.7
SEC31A-241ENST00000515749 AQRO60306 1485 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEC31A-241ENST00000515749 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
SEC31A-241ENST00000515749 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
SEC31A-241ENST00000515749 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
SEC31A-241ENST00000515749 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.54
SEC31A-241ENST00000515749 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-241ENST00000515749 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-241ENST00000515749 HAX1O00165 279 aa11.69□□□□□ -0.54
SEC31A-241ENST00000515749 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
SEC31A-241ENST00000515749 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
SEC31A-241ENST00000515749 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
SEC31A-241ENST00000515749 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
SEC31A-241ENST00000515749 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
SEC31A-241ENST00000515749 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
SEC31A-241ENST00000515749 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
SEC31A-241ENST00000515749 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
SEC31A-241ENST00000515749 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
SEC31A-241ENST00000515749 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
SEC31A-241ENST00000515749 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
SEC31A-241ENST00000515749 SAMD9Q5K651 1589 aa11.6□□□□□ -0.55
SEC31A-241ENST00000515749 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
SEC31A-241ENST00000515749 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
SEC31A-241ENST00000515749 CHMP7Q8WUX9 453 aaPredicted RBP11.59□□□□□ -0.55
SEC31A-241ENST00000515749 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
SEC31A-241ENST00000515749 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
SEC31A-241ENST00000515749 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
SEC31A-241ENST00000515749 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
SEC31A-241ENST00000515749 NUP160Q12769 1436 aa11.54□□□□□ -0.56
SEC31A-241ENST00000515749 FYCO1Q9BQS8 1478 aa11.54□□□□□ -0.56
SEC31A-241ENST00000515749 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
SEC31A-241ENST00000515749 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.57
SEC31A-241ENST00000515749 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
SEC31A-241ENST00000515749 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
SEC31A-241ENST00000515749 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
SEC31A-241ENST00000515749 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
SEC31A-241ENST00000515749 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
SEC31A-241ENST00000515749 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
SEC31A-241ENST00000515749 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
SEC31A-241ENST00000515749 CHD1O14646 1710 aa11.48□□□□□ -0.57
SEC31A-241ENST00000515749 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
SEC31A-241ENST00000515749 CARMIL2Q6F5E8 1435 aa11.47□□□□□ -0.57
SEC31A-241ENST00000515749 EVX2Q03828 476 aa11.47□□□□□ -0.57
SEC31A-241ENST00000515749 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
SEC31A-241ENST00000515749 JPH4Q96JJ6 628 aa11.45□□□□□ -0.58
SEC31A-241ENST00000515749 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
SEC31A-241ENST00000515749 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms