RNA–Protein interactions for RNA: ENST00000515333.1

PGM3-213, Transcript of phosphoglucomutase 3, humanhuman

TSL 2

Gene PGM3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-213ENST00000515333 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
PGM3-213ENST00000515333 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
PGM3-213ENST00000515333 CUL7Q14999 1698 aa22.73■■□□□ 1.23
PGM3-213ENST00000515333 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
PGM3-213ENST00000515333 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
PGM3-213ENST00000515333 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
PGM3-213ENST00000515333 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
PGM3-213ENST00000515333 JPH4Q96JJ6 628 aa22.62■■□□□ 1.21
PGM3-213ENST00000515333 KIAA0586Q9BVV6 1533 aa22.58■■□□□ 1.21
PGM3-213ENST00000515333 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
PGM3-213ENST00000515333 IQGAP2Q13576 1575 aa22.45■■□□□ 1.18
PGM3-213ENST00000515333 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
PGM3-213ENST00000515333 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
PGM3-213ENST00000515333 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
PGM3-213ENST00000515333 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
PGM3-213ENST00000515333 ADCY10Q96PN6 1610 aa22.33■■□□□ 1.17
PGM3-213ENST00000515333 PTPRGP23470 1445 aa22.31■■□□□ 1.16
PGM3-213ENST00000515333 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
PGM3-213ENST00000515333 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
PGM3-213ENST00000515333 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
PGM3-213ENST00000515333 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
PGM3-213ENST00000515333 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
PGM3-213ENST00000515333 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
PGM3-213ENST00000515333 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
PGM3-213ENST00000515333 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
PGM3-213ENST00000515333 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
PGM3-213ENST00000515333 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
PGM3-213ENST00000515333 EEA1Q15075 1411 aa22.22■■□□□ 1.15
PGM3-213ENST00000515333 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
PGM3-213ENST00000515333 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
PGM3-213ENST00000515333 ABCC2Q92887 1545 aa22.16■■□□□ 1.14
PGM3-213ENST00000515333 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
PGM3-213ENST00000515333 FAM69CQ0P6D2 419 aa22.13■■□□□ 1.13
PGM3-213ENST00000515333 UHRF1BP1LA0JNW5 1464 aa22.13■■□□□ 1.13
PGM3-213ENST00000515333 PLB1Q6P1J6 1458 aa22.07■■□□□ 1.12
PGM3-213ENST00000515333 ASXL2Q76L83 1435 aa22.06■■□□□ 1.12
PGM3-213ENST00000515333 KIF21BO75037 1637 aa22.04■■□□□ 1.12
PGM3-213ENST00000515333 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
PGM3-213ENST00000515333 P3H3Q8IVL6 736 aa22.03■■□□□ 1.12
PGM3-213ENST00000515333 TSPOAP1O95153 1857 aa22.03■■□□□ 1.12
PGM3-213ENST00000515333 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.11
PGM3-213ENST00000515333 GLI2P10070 1586 aa22.01■■□□□ 1.11
PGM3-213ENST00000515333 ABCA8O94911 1581 aa22■■□□□ 1.11
PGM3-213ENST00000515333 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
PGM3-213ENST00000515333 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
PGM3-213ENST00000515333 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
PGM3-213ENST00000515333 KDM6BO15054 1643 aa21.97■■□□□ 1.11
PGM3-213ENST00000515333 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
PGM3-213ENST00000515333 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
PGM3-213ENST00000515333 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
PGM3-213ENST00000515333 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
PGM3-213ENST00000515333 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
PGM3-213ENST00000515333 MAP3K4Q9Y6R4 1608 aa21.89■■□□□ 1.09
PGM3-213ENST00000515333 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
PGM3-213ENST00000515333 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
PGM3-213ENST00000515333 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
PGM3-213ENST00000515333 ATP10BO94823 1461 aa21.82■■□□□ 1.08
PGM3-213ENST00000515333 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
PGM3-213ENST00000515333 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.08
PGM3-213ENST00000515333 TEX14Q8IWB6 1497 aa21.76■■□□□ 1.07
PGM3-213ENST00000515333 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
PGM3-213ENST00000515333 CFAP43Q8NDM7 1665 aa21.73■■□□□ 1.07
PGM3-213ENST00000515333 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
PGM3-213ENST00000515333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
PGM3-213ENST00000515333 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
PGM3-213ENST00000515333 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
PGM3-213ENST00000515333 KDM4FA0A1W2PPD8 638 aa21.7■■□□□ 1.06
PGM3-213ENST00000515333 MAGI3Q5TCQ9 1506 aa21.69■■□□□ 1.06
PGM3-213ENST00000515333 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
PGM3-213ENST00000515333 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
PGM3-213ENST00000515333 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
PGM3-213ENST00000515333 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
PGM3-213ENST00000515333 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
PGM3-213ENST00000515333 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
PGM3-213ENST00000515333 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
PGM3-213ENST00000515333 ADGRL1O94910 1474 aa21.55■■□□□ 1.04
PGM3-213ENST00000515333 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
PGM3-213ENST00000515333 CLIP1P30622 1438 aa21.51■■□□□ 1.03
PGM3-213ENST00000515333 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
PGM3-213ENST00000515333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
PGM3-213ENST00000515333 TTC37Q6PGP7 1564 aa21.49■■□□□ 1.03
PGM3-213ENST00000515333 MSH5O43196 834 aa21.49■■□□□ 1.03
PGM3-213ENST00000515333 NEO1Q92859 1461 aa21.47■■□□□ 1.03
PGM3-213ENST00000515333 PHLDB1Q86UU1 1377 aa21.47■■□□□ 1.03
PGM3-213ENST00000515333 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
PGM3-213ENST00000515333 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
PGM3-213ENST00000515333 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
PGM3-213ENST00000515333 FANCAO15360 1455 aa21.41■■□□□ 1.02
PGM3-213ENST00000515333 KIF14Q15058 1648 aa21.4■■□□□ 1.02
PGM3-213ENST00000515333 FYCO1Q9BQS8 1478 aa21.4■■□□□ 1.02
PGM3-213ENST00000515333 TROQ12816 1431 aaPredicted RBP21.4■■□□□ 1.02
PGM3-213ENST00000515333 RAPGEF3O95398 923 aa21.4■■□□□ 1.02
PGM3-213ENST00000515333 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
PGM3-213ENST00000515333 FRMPD1Q5SYB0 1578 aa21.39■■□□□ 1.01
PGM3-213ENST00000515333 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
PGM3-213ENST00000515333 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
PGM3-213ENST00000515333 AKNAQ7Z591 1439 aa21.37■■□□□ 1.01
PGM3-213ENST00000515333 PLCH2O75038 1416 aa21.34■■□□□ 1.01
PGM3-213ENST00000515333 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
PGM3-213ENST00000515333 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms